RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 TMED8Q6PL24 325 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P23-201ENST00000518743 C17orf99Q6UX52 265 aa5.51□□□□□ -1.53
HMGB1P23-201ENST00000518743 TMC5Q6UXY8 1006 aa5.51□□□□□ -1.53
HMGB1P23-201ENST00000518743 ASCL5Q7RTU5 278 aa5.51□□□□□ -1.53
HMGB1P23-201ENST00000518743 HEATR3Q7Z4Q2 680 aa5.51□□□□□ -1.53
HMGB1P23-201ENST00000518743 SUGP1Q8IWZ8 645 aaKnown RBP5.51□□□□□ -1.53
HMGB1P23-201ENST00000518743 KIRREL1Q96J84 757 aa5.51□□□□□ -1.53
HMGB1P23-201ENST00000518743 SENP7Q9BQF6 1050 aa5.51□□□□□ -1.53
HMGB1P23-201ENST00000518743 CRB3Q9BUF7 120 aa5.51□□□□□ -1.53
HMGB1P23-201ENST00000518743 APOL5Q9BWW9 433 aa5.51□□□□□ -1.53
HMGB1P23-201ENST00000518743 SENP6Q9GZR1 1112 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P23-201ENST00000518743 DEFB129Q9H1M3 183 aa5.51□□□□□ -1.53
HMGB1P23-201ENST00000518743 MYLK2Q9H1R3 596 aa5.51□□□□□ -1.53
HMGB1P23-201ENST00000518743 LANCL2Q9NS86 450 aa5.51□□□□□ -1.53
HMGB1P23-201ENST00000518743 TMEM140Q9NV12 185 aa5.51□□□□□ -1.53
HMGB1P23-201ENST00000518743 ZFP69BQ9UJL9 534 aa5.51□□□□□ -1.53
HMGB1P23-201ENST00000518743 PCDHB1Q9Y5F3 818 aa5.51□□□□□ -1.53
HMGB1P23-201ENST00000518743 PCDHA13Q9Y5I0 950 aa5.51□□□□□ -1.53
HMGB1P23-201ENST00000518743 DGKBQ9Y6T7 804 aa5.51□□□□□ -1.53
HMGB1P23-201ENST00000518743 DUOX1Q9NRD9 1551 aa5.5□□□□□ -1.53
HMGB1P23-201ENST00000518743 UBR2Q8IWV8 1755 aa5.5□□□□□ -1.53
HMGB1P23-201ENST00000518743 MYO15AQ9UKN7 3530 aa5.5□□□□□ -1.53
HMGB1P23-201ENST00000518743 WNT10BO00744 389 aa5.5□□□□□ -1.53
HMGB1P23-201ENST00000518743 TLR5O60602 858 aa5.5□□□□□ -1.53
HMGB1P23-201ENST00000518743 FGF18O76093 207 aa5.5□□□□□ -1.53
HMGB1P23-201ENST00000518743 LY86O95711 162 aa5.5□□□□□ -1.53
HMGB1P23-201ENST00000518743 EFEMP2O95967 443 aa5.5□□□□□ -1.53
HMGB1P23-201ENST00000518743 HMGCRP04035 888 aa5.5□□□□□ -1.53
HMGB1P23-201ENST00000518743 THP07101 528 aa5.5□□□□□ -1.53
HMGB1P23-201ENST00000518743 BRAFP15056 766 aa5.5□□□□□ -1.53
HMGB1P23-201ENST00000518743 GPTP24298 496 aa5.5□□□□□ -1.53
HMGB1P23-201ENST00000518743 SLC7A1P30825 629 aa5.5□□□□□ -1.53
HMGB1P23-201ENST00000518743 CRHR1P34998 444 aa5.5□□□□□ -1.53
HMGB1P23-201ENST00000518743 DDIT3P35638 169 aa5.5□□□□□ -1.53
HMGB1P23-201ENST00000518743 CD97P48960 835 aa5.5□□□□□ -1.53
HMGB1P23-201ENST00000518743 CD83Q01151 205 aa5.5□□□□□ -1.53
HMGB1P23-201ENST00000518743 ZNF543Q08ER8 600 aa5.5□□□□□ -1.53
HMGB1P23-201ENST00000518743 TCF15Q12870 199 aa5.5□□□□□ -1.53
HMGB1P23-201ENST00000518743 FAM209BQ5JX69 171 aa5.5□□□□□ -1.53
HMGB1P23-201ENST00000518743 LIPIQ6XZB0 460 aa5.5□□□□□ -1.53
HMGB1P23-201ENST00000518743 PDZD4Q76G19 769 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P23-201ENST00000518743 TAS1R1Q7RTX1 841 aa5.5□□□□□ -1.53
HMGB1P23-201ENST00000518743 IL31RAQ8NI17 732 aa5.5□□□□□ -1.53
HMGB1P23-201ENST00000518743 CASKIN2Q8WXE0 1202 aa5.5□□□□□ -1.53
HMGB1P23-201ENST00000518743 RMDN1Q96DB5 314 aa5.5□□□□□ -1.53
HMGB1P23-201ENST00000518743 TMEM41AQ96HV5 264 aa5.5□□□□□ -1.53
HMGB1P23-201ENST00000518743 TBATAQ96M53 351 aa5.5□□□□□ -1.53
HMGB1P23-201ENST00000518743 FDXACB1Q9BRP7 624 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P23-201ENST00000518743 MBNL3Q9NUK0 354 aaKnown RBP5.5□□□□□ -1.53
HMGB1P23-201ENST00000518743 SIDT1Q9NXL6 827 aaKnown RBP5.5□□□□□ -1.53
HMGB1P23-201ENST00000518743 GPRC5BQ9NZH0 403 aa5.5□□□□□ -1.53
HMGB1P23-201ENST00000518743 MAGED2Q9UNF1 606 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P23-201ENST00000518743 CORO2BQ9UQ03 480 aa5.5□□□□□ -1.53
HMGB1P23-201ENST00000518743 KIF20BQ96Q89 1820 aa5.5□□□□□ -1.53
HMGB1P23-201ENST00000518743 DOCK3Q8IZD9 2030 aa5.5□□□□□ -1.53
HMGB1P23-201ENST00000518743 PLXNA3P51805 1871 aa5.49□□□□□ -1.53
HMGB1P23-201ENST00000518743 DNAH14Q0VDD8 3507 aa5.49□□□□□ -1.53
HMGB1P23-201ENST00000518743 PRR23AA6NEV1 266 aa5.49□□□□□ -1.53
HMGB1P23-201ENST00000518743 POM121BA6NF01 834 aa5.49□□□□□ -1.53
HMGB1P23-201ENST00000518743 H0Y858 1186 aa5.49□□□□□ -1.53
HMGB1P23-201ENST00000518743 HNRNPDLO14979 420 aaKnown RBP5.49□□□□□ -1.53
HMGB1P23-201ENST00000518743 KPNA5O15131 536 aa5.49□□□□□ -1.53
HMGB1P23-201ENST00000518743 HSP90AA1P07900 732 aaKnown RBP5.49□□□□□ -1.53
HMGB1P23-201ENST00000518743 RNASE1P07998 156 aaKnown RBP5.49□□□□□ -1.53
HMGB1P23-201ENST00000518743 PARP1P09874 1014 aaKnown RBP5.49□□□□□ -1.53
HMGB1P23-201ENST00000518743 RENBPP51606 427 aa5.49□□□□□ -1.53
HMGB1P23-201ENST00000518743 TRIM14Q14142 442 aa5.49□□□□□ -1.53
HMGB1P23-201ENST00000518743 PLS1Q14651 629 aa5.49□□□□□ -1.53
HMGB1P23-201ENST00000518743 STARD3Q14849 445 aa5.49□□□□□ -1.53
HMGB1P23-201ENST00000518743 MAPRE1Q15691 268 aaKnown RBP5.49□□□□□ -1.53
HMGB1P23-201ENST00000518743 KHDC1Q4VXA5 237 aaKnown RBP5.49□□□□□ -1.53
HMGB1P23-201ENST00000518743 SWSAP1Q6NVH7 229 aa5.49□□□□□ -1.53
HMGB1P23-201ENST00000518743 RFX8Q6ZV50 586 aa5.49□□□□□ -1.53
HMGB1P23-201ENST00000518743 BEND5Q7L4P6 421 aa5.49□□□□□ -1.53
HMGB1P23-201ENST00000518743 LURAP1LQ8IV03 231 aa5.49□□□□□ -1.53
HMGB1P23-201ENST00000518743 ANKRD18AQ8IVF6 992 aa5.49□□□□□ -1.53
HMGB1P23-201ENST00000518743 SYTL1Q8IYJ3 562 aa5.49□□□□□ -1.53
HMGB1P23-201ENST00000518743 ADSSL1Q8N142 457 aa5.49□□□□□ -1.53
HMGB1P23-201ENST00000518743 MSL3Q8N5Y2 521 aaKnown RBP5.49□□□□□ -1.53
HMGB1P23-201ENST00000518743 OR7D4Q8NG98 312 aa5.49□□□□□ -1.53
HMGB1P23-201ENST00000518743 KBTBD7Q8WVZ9 684 aa5.49□□□□□ -1.53
HMGB1P23-201ENST00000518743 IPCEF1Q8WWN9 437 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P23-201ENST00000518743 HOXB13Q92826 284 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P23-201ENST00000518743 MRGPRX4Q96LA9 322 aa5.49□□□□□ -1.53
HMGB1P23-201ENST00000518743 TACO1Q9BSH4 297 aaKnown RBP5.49□□□□□ -1.53
HMGB1P23-201ENST00000518743 ARMT1Q9H993 441 aa5.49□□□□□ -1.53
HMGB1P23-201ENST00000518743 ZMAT3Q9HA38 289 aaKnown RBP5.49□□□□□ -1.53
HMGB1P23-201ENST00000518743 SLC28A3Q9HAS3 691 aa5.49□□□□□ -1.53
HMGB1P23-201ENST00000518743 ZCCHC17Q9NP64 241 aaKnown RBP5.49□□□□□ -1.53
HMGB1P23-201ENST00000518743 KCND1Q9NSA2 647 aa5.49□□□□□ -1.53
HMGB1P23-201ENST00000518743 ABCF2Q9UG63 623 aa5.49□□□□□ -1.53
HMGB1P23-201ENST00000518743 AFF4Q9UHB7 1163 aaKnown RBP5.49□□□□□ -1.53
HMGB1P23-201ENST00000518743 PNMA2Q9UL42 364 aa5.49□□□□□ -1.53
HMGB1P23-201ENST00000518743 JAG2Q9Y219 1238 aa5.49□□□□□ -1.53
HMGB1P23-201ENST00000518743 COL1A1P02452 1464 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P23-201ENST00000518743 DMXL1Q9Y485 3027 aa5.48□□□□□ -1.53
HMGB1P23-201ENST00000518743 HEG1Q9ULI3 1381 aa5.48□□□□□ -1.53
HMGB1P23-201ENST00000518743 A0A0A6YYK5 440 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P23-201ENST00000518743 MYO1FO00160 1098 aa5.48□□□□□ -1.53
HMGB1P23-201ENST00000518743 PDHXO00330 501 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms