RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 USP49Q70CQ1 688 aa9.19□□□□□ -0.94
PRKCB-208ENST00000487674 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.19□□□□□ -0.94
PRKCB-208ENST00000487674 TMEM150AQ86TG1 271 aa9.19□□□□□ -0.94
PRKCB-208ENST00000487674 TMEM86AQ8N2M4 240 aa9.19□□□□□ -0.94
PRKCB-208ENST00000487674 LRRC52Q8N7C0 313 aa9.19□□□□□ -0.94
PRKCB-208ENST00000487674 TTC8Q8TAM2 541 aa9.19□□□□□ -0.94
PRKCB-208ENST00000487674 GIPC2Q8TF65 315 aa9.19□□□□□ -0.94
PRKCB-208ENST00000487674 ZNF516Q92618 1163 aa9.19□□□□□ -0.94
PRKCB-208ENST00000487674 DNAJC19Q96DA6 116 aa9.19□□□□□ -0.94
PRKCB-208ENST00000487674 ACCSQ96QU6 501 aa9.19□□□□□ -0.94
PRKCB-208ENST00000487674 FAM213AQ9BRX8 229 aa9.19□□□□□ -0.94
PRKCB-208ENST00000487674 SLC46A2Q9BY10 475 aa9.19□□□□□ -0.94
PRKCB-208ENST00000487674 SMG9Q9H0W8 520 aaKnown RBP9.19□□□□□ -0.94
PRKCB-208ENST00000487674 ABCB6Q9NP58 842 aa9.19□□□□□ -0.94
PRKCB-208ENST00000487674 RBAKQ9NYW8 714 aaPredicted RBP9.19□□□□□ -0.94
PRKCB-208ENST00000487674 ITGA11Q9UKX5 1188 aa9.19□□□□□ -0.94
PRKCB-208ENST00000487674 SRPRBQ9Y5M8 271 aaKnown RBP9.19□□□□□ -0.94
PRKCB-208ENST00000487674 CLIC4Q9Y696 253 aa9.19□□□□□ -0.94
PRKCB-208ENST00000487674 FOXD2O60548 495 aaPredicted RBP9.18□□□□□ -0.94
PRKCB-208ENST00000487674 GCNT3O95395 438 aa9.18□□□□□ -0.94
PRKCB-208ENST00000487674 LDHAP00338 332 aaKnown RBP9.18□□□□□ -0.94
PRKCB-208ENST00000487674 F11P03951 625 aa9.18□□□□□ -0.94
PRKCB-208ENST00000487674 CENPBP07199 599 aaPredicted RBP9.18□□□□□ -0.94
PRKCB-208ENST00000487674 CSH1P0DML2 217 aa9.18□□□□□ -0.94
PRKCB-208ENST00000487674 CSH2P0DML3 217 aa9.18□□□□□ -0.94
PRKCB-208ENST00000487674 GARTP22102 1010 aa9.18□□□□□ -0.94
PRKCB-208ENST00000487674 WNT7BP56706 349 aa9.18□□□□□ -0.94
PRKCB-208ENST00000487674 KCNA1Q09470 495 aa9.18□□□□□ -0.94
PRKCB-208ENST00000487674 BFSP1Q12934 665 aa9.18□□□□□ -0.94
PRKCB-208ENST00000487674 RESTQ13127 1097 aa9.18□□□□□ -0.94
PRKCB-208ENST00000487674 CUL4AQ13619 759 aa9.18□□□□□ -0.94
PRKCB-208ENST00000487674 TMEM196Q5HYL7 178 aa9.18□□□□□ -0.94
PRKCB-208ENST00000487674 INTS6LQ5JSJ4 861 aaKnown RBP9.18□□□□□ -0.94
PRKCB-208ENST00000487674 HEATR6Q6AI08 1181 aaKnown RBP9.18□□□□□ -0.94
PRKCB-208ENST00000487674 RALGAPA1Q6GYQ0 2036 aa9.18□□□□□ -0.94
PRKCB-208ENST00000487674 SPAG17Q6Q759 2223 aa9.18□□□□□ -0.94
PRKCB-208ENST00000487674 CCDC73Q6ZRK6 1079 aa9.18□□□□□ -0.94
PRKCB-208ENST00000487674 SV2BQ7L1I2 683 aa9.18□□□□□ -0.94
PRKCB-208ENST00000487674 WDR5BQ86VZ2 330 aa9.18□□□□□ -0.94
PRKCB-208ENST00000487674 PDCL2Q8N4E4 241 aa9.18□□□□□ -0.94
PRKCB-208ENST00000487674 MAB21L3Q8N8X9 362 aa9.18□□□□□ -0.94
PRKCB-208ENST00000487674 C1orf127Q8N9H9 656 aa9.18□□□□□ -0.94
PRKCB-208ENST00000487674 SPATA18Q8TC71 538 aa9.18□□□□□ -0.94
PRKCB-208ENST00000487674 NETO1Q8TDF5 533 aa9.18□□□□□ -0.94
PRKCB-208ENST00000487674 CACTINQ8WUQ7 758 aaKnown RBP9.18□□□□□ -0.94
PRKCB-208ENST00000487674 MRPS31Q92665 395 aaKnown RBP9.18□□□□□ -0.94
PRKCB-208ENST00000487674 USP13Q92995 863 aaPredicted RBP9.18□□□□□ -0.94
PRKCB-208ENST00000487674 SAAL1Q96ER3 474 aa9.18□□□□□ -0.94
PRKCB-208ENST00000487674 TRMT2BQ96GJ1 504 aaKnown RBP9.18□□□□□ -0.94
PRKCB-208ENST00000487674 FAM83CQ9BQN1 747 aa9.18□□□□□ -0.94
PRKCB-208ENST00000487674 ACBD6Q9BR61 282 aa9.18□□□□□ -0.94
PRKCB-208ENST00000487674 HPS4Q9NQG7 708 aa9.18□□□□□ -0.94
PRKCB-208ENST00000487674 TDP1Q9NUW8 608 aa9.18□□□□□ -0.94
PRKCB-208ENST00000487674 TMLHEQ9NVH6 421 aa9.18□□□□□ -0.94
PRKCB-208ENST00000487674 C2orf42Q9NWW7 574 aa9.18□□□□□ -0.94
PRKCB-208ENST00000487674 TBC1D7Q9P0N9 293 aa9.18□□□□□ -0.94
PRKCB-208ENST00000487674 UXTQ9UBK9 157 aaPredicted RBP9.18□□□□□ -0.94
PRKCB-208ENST00000487674 L1RE1Q9UN81 338 aa9.18□□□□□ -0.94
PRKCB-208ENST00000487674 AGAP1Q9UPQ3 857 aa9.18□□□□□ -0.94
PRKCB-208ENST00000487674 CCL26Q9Y258 94 aa9.18□□□□□ -0.94
PRKCB-208ENST00000487674 MORC2Q9Y6X9 1032 aaPredicted RBP9.18□□□□□ -0.94
PRKCB-208ENST00000487674 TPRP12270 2363 aaKnown RBP9.17□□□□□ -0.94
PRKCB-208ENST00000487674 HELZP42694 1942 aaKnown RBP9.17□□□□□ -0.94
PRKCB-208ENST00000487674 GREB1Q4ZG55 1949 aa9.17□□□□□ -0.94
PRKCB-208ENST00000487674 KIAA1549LQ6ZVL6 1849 aa9.17□□□□□ -0.94
PRKCB-208ENST00000487674 EPG5Q9HCE0 2579 aa9.17□□□□□ -0.94
PRKCB-208ENST00000487674 FRMD3A2A2Y4 597 aa9.17□□□□□ -0.94
PRKCB-208ENST00000487674 EXTL3O43909 919 aa9.17□□□□□ -0.94
PRKCB-208ENST00000487674 HUS1O60921 280 aa9.17□□□□□ -0.94
PRKCB-208ENST00000487674 PRPF40AO75400 957 aaKnown RBP9.17□□□□□ -0.94
PRKCB-208ENST00000487674 NOL4O94818 638 aa9.17□□□□□ -0.94
PRKCB-208ENST00000487674 IDEP14735 1019 aa9.17□□□□□ -0.94
PRKCB-208ENST00000487674 STAT6P42226 847 aa9.17□□□□□ -0.94
PRKCB-208ENST00000487674 GPR15P49685 360 aa9.17□□□□□ -0.94
PRKCB-208ENST00000487674 CASP5P51878 434 aa9.17□□□□□ -0.94
PRKCB-208ENST00000487674 RPL10AP62906 217 aaKnown RBP9.17□□□□□ -0.94
PRKCB-208ENST00000487674 AMPD2Q01433 879 aa9.17□□□□□ -0.94
PRKCB-208ENST00000487674 MYL7Q01449 175 aa9.17□□□□□ -0.94
PRKCB-208ENST00000487674 GRSF1Q12849 480 aaKnown RBP eCLIP9.17□□□□□ -0.94
PRKCB-208ENST00000487674 SRSF5Q13243 272 aaKnown RBP9.17□□□□□ -0.94
PRKCB-208ENST00000487674 RUNX3Q13761 415 aa9.17□□□□□ -0.94
PRKCB-208ENST00000487674 ZNF268Q14587 947 aaPredicted RBP9.17□□□□□ -0.94
PRKCB-208ENST00000487674 PDGFRLQ15198 375 aa9.17□□□□□ -0.94
PRKCB-208ENST00000487674 CSRP2Q16527 193 aa9.17□□□□□ -0.94
PRKCB-208ENST00000487674 CFAP221Q4G0U5 840 aa9.17□□□□□ -0.94
PRKCB-208ENST00000487674 TXNDC8Q6A555 127 aa9.17□□□□□ -0.94
PRKCB-208ENST00000487674 FSTL4Q6MZW2 842 aa9.17□□□□□ -0.94
PRKCB-208ENST00000487674 CC2D1AQ6P1N0 951 aaPredicted RBP9.17□□□□□ -0.94
PRKCB-208ENST00000487674 PRR23CQ6ZRP0 262 aa9.17□□□□□ -0.94
PRKCB-208ENST00000487674 CEP68Q76N32 757 aa9.17□□□□□ -0.94
PRKCB-208ENST00000487674 MON1AQ86VX9 555 aa9.17□□□□□ -0.94
PRKCB-208ENST00000487674 ADGRF2Q8IZF7 708 aa9.17□□□□□ -0.94
PRKCB-208ENST00000487674 SYCP3Q8IZU3 236 aa9.17□□□□□ -0.94
PRKCB-208ENST00000487674 TOP6BLQ8N6T0 577 aa9.17□□□□□ -0.94
PRKCB-208ENST00000487674 CXorf38Q8TB03 319 aa9.17□□□□□ -0.94
PRKCB-208ENST00000487674 CHFRQ96EP1 664 aa9.17□□□□□ -0.94
PRKCB-208ENST00000487674 CLIC6Q96NY7 704 aa9.17□□□□□ -0.94
PRKCB-208ENST00000487674 PKMYT1Q99640 499 aa9.17□□□□□ -0.94
PRKCB-208ENST00000487674 CBWD1Q9BRT8 395 aa9.17□□□□□ -0.94
PRKCB-208ENST00000487674 PI4K2AQ9BTU6 479 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms