RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 CEP72Q9P209 647 aa11.53□□□□□ -0.56
ATG4B-219ENST00000479941 DNMT3BQ9UBC3 853 aaKnown RBP11.53□□□□□ -0.56
ATG4B-219ENST00000479941 USTQ9Y2C2 406 aa11.53□□□□□ -0.56
ATG4B-219ENST00000479941 NR2E1Q9Y466 385 aa11.53□□□□□ -0.56
ATG4B-219ENST00000479941 CLUHO75153 1309 aa11.53□□□□□ -0.56
ATG4B-219ENST00000479941 LRRC10BA6NIK2 292 aa11.52□□□□□ -0.57
ATG4B-219ENST00000479941 PES1O00541 588 aaKnown RBP11.52□□□□□ -0.57
ATG4B-219ENST00000479941 ZNF18P17022 549 aa11.52□□□□□ -0.57
ATG4B-219ENST00000479941 ATF6P18850 670 aa11.52□□□□□ -0.57
ATG4B-219ENST00000479941 BDNFP23560 247 aa11.52□□□□□ -0.57
ATG4B-219ENST00000479941 CDR1P51861 262 aa11.52□□□□□ -0.57
ATG4B-219ENST00000479941 ZP2Q05996 745 aa11.52□□□□□ -0.57
ATG4B-219ENST00000479941 KRT31Q15323 416 aa11.52□□□□□ -0.57
ATG4B-219ENST00000479941 CCDC142Q17RM4 750 aa11.52□□□□□ -0.57
ATG4B-219ENST00000479941 PABPC1LQ4VXU2 614 aaKnown RBP11.52□□□□□ -0.57
ATG4B-219ENST00000479941 CYP4A22Q5TCH4 519 aa11.52□□□□□ -0.57
ATG4B-219ENST00000479941 SMYD5Q6GMV2 418 aa11.52□□□□□ -0.57
ATG4B-219ENST00000479941 TRIM65Q6PJ69 517 aa11.52□□□□□ -0.57
ATG4B-219ENST00000479941 OTOP3Q7RTS5 596 aa11.52□□□□□ -0.57
ATG4B-219ENST00000479941 ACOT1Q86TX2 421 aa11.52□□□□□ -0.57
ATG4B-219ENST00000479941 DHX40Q8IX18 779 aaKnown RBP11.52□□□□□ -0.57
ATG4B-219ENST00000479941 TTC9BQ8N6N2 239 aa11.52□□□□□ -0.57
ATG4B-219ENST00000479941 FAM200AQ8TCP9 573 aa11.52□□□□□ -0.57
ATG4B-219ENST00000479941 ADAMTS19Q8TE59 1207 aa11.52□□□□□ -0.57
ATG4B-219ENST00000479941 WHAMMQ8TF30 809 aa11.52□□□□□ -0.57
ATG4B-219ENST00000479941 PSMG2Q969U7 264 aa11.52□□□□□ -0.57
ATG4B-219ENST00000479941 JAKMIP2Q96AA8 810 aa11.52□□□□□ -0.57
ATG4B-219ENST00000479941 ACSF2Q96CM8 615 aaPredicted RBP11.52□□□□□ -0.57
ATG4B-219ENST00000479941 TWNKQ96RR1 684 aa11.52□□□□□ -0.57
ATG4B-219ENST00000479941 ARID3AQ99856 593 aa11.52□□□□□ -0.57
ATG4B-219ENST00000479941 CORO1BQ9BR76 489 aa11.52□□□□□ -0.57
ATG4B-219ENST00000479941 CRACR2AQ9BSW2 395 aa11.52□□□□□ -0.57
ATG4B-219ENST00000479941 ELOVL4Q9GZR5 314 aa11.52□□□□□ -0.57
ATG4B-219ENST00000479941 ASAH2Q9NR71 780 aa11.52□□□□□ -0.57
ATG4B-219ENST00000479941 TAB2Q9NYJ8 693 aa11.52□□□□□ -0.57
ATG4B-219ENST00000479941 HMGXB4Q9UGU5 601 aa11.52□□□□□ -0.57
ATG4B-219ENST00000479941 LIMA1Q9UHB6 759 aaKnown RBP11.52□□□□□ -0.57
ATG4B-219ENST00000479941 ATP8B3O60423 1300 aa11.52□□□□□ -0.57
ATG4B-219ENST00000479941 ZNF197O14709 1029 aa11.51□□□□□ -0.57
ATG4B-219ENST00000479941 TRIM66O15016 1216 aa11.51□□□□□ -0.57
ATG4B-219ENST00000479941 SOAT2O75908 522 aa11.51□□□□□ -0.57
ATG4B-219ENST00000479941 MICAL2O94851 1124 aa11.51□□□□□ -0.57
ATG4B-219ENST00000479941 RHOP08100 348 aa11.51□□□□□ -0.57
ATG4B-219ENST00000479941 CSH1P0DML2 217 aa11.51□□□□□ -0.57
ATG4B-219ENST00000479941 CSH2P0DML3 217 aa11.51□□□□□ -0.57
ATG4B-219ENST00000479941 SLC9A1P19634 815 aa11.51□□□□□ -0.57
ATG4B-219ENST00000479941 FSHRP23945 695 aa11.51□□□□□ -0.57
ATG4B-219ENST00000479941 PON1P27169 355 aa11.51□□□□□ -0.57
ATG4B-219ENST00000479941 ANXA13P27216 316 aa11.51□□□□□ -0.57
ATG4B-219ENST00000479941 GRIK1P39086 918 aa11.51□□□□□ -0.57
ATG4B-219ENST00000479941 EPHA5P54756 1037 aa11.51□□□□□ -0.57
ATG4B-219ENST00000479941 ORC1Q13415 861 aa11.51□□□□□ -0.57
ATG4B-219ENST00000479941 IQCB1Q15051 598 aa11.51□□□□□ -0.57
ATG4B-219ENST00000479941 TAF12Q16514 161 aa11.51□□□□□ -0.57
ATG4B-219ENST00000479941 ZNF394Q53GI3 561 aa11.51□□□□□ -0.57
ATG4B-219ENST00000479941 PHLDB3Q6NSJ2 640 aa11.51□□□□□ -0.57
ATG4B-219ENST00000479941 PDZD4Q76G19 769 aaPredicted RBP11.51□□□□□ -0.57
ATG4B-219ENST00000479941 RRAGAQ7L523 313 aa11.51□□□□□ -0.57
ATG4B-219ENST00000479941 ENOSF1Q7L5Y1 443 aa11.51□□□□□ -0.57
ATG4B-219ENST00000479941 DNAJB7Q7Z6W7 309 aaPredicted RBP11.51□□□□□ -0.57
ATG4B-219ENST00000479941 SCN4BQ8IWT1 228 aa11.51□□□□□ -0.57
ATG4B-219ENST00000479941 PLCD3Q8N3E9 789 aa11.51□□□□□ -0.57
ATG4B-219ENST00000479941 UBR7Q8N806 425 aa11.51□□□□□ -0.57
ATG4B-219ENST00000479941 SLC4A11Q8NBS3 891 aa11.51□□□□□ -0.57
ATG4B-219ENST00000479941 TMEM176AQ96HP8 235 aa11.51□□□□□ -0.57
ATG4B-219ENST00000479941 RPGRIP1Q96KN7 1286 aa11.51□□□□□ -0.57
ATG4B-219ENST00000479941 UHRF1Q96T88 793 aaPredicted RBP11.51□□□□□ -0.57
ATG4B-219ENST00000479941 LPIN3Q9BQK8 851 aa11.51□□□□□ -0.57
ATG4B-219ENST00000479941 MED10Q9BTT4 135 aa11.51□□□□□ -0.57
ATG4B-219ENST00000479941 B3GNT5Q9BYG0 378 aa11.51□□□□□ -0.57
ATG4B-219ENST00000479941 VPS16Q9H269 839 aa11.51□□□□□ -0.57
ATG4B-219ENST00000479941 HSD3B7Q9H2F3 369 aa11.51□□□□□ -0.57
ATG4B-219ENST00000479941 HCFC1R1Q9NWW0 138 aa11.51□□□□□ -0.57
ATG4B-219ENST00000479941 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.51□□□□□ -0.57
ATG4B-219ENST00000479941 APEX2Q9UBZ4 518 aa11.51□□□□□ -0.57
ATG4B-219ENST00000479941 C2orf16Q68DN1 1984 aa11.5□□□□□ -0.57
ATG4B-219ENST00000479941 C19orf67A6NJJ6 358 aa11.5□□□□□ -0.57
ATG4B-219ENST00000479941 LOC730098B7Z3J9 87 aa11.5□□□□□ -0.57
ATG4B-219ENST00000479941 FGF19O95750 216 aa11.5□□□□□ -0.57
ATG4B-219ENST00000479941 ACO1P21399 889 aaKnown RBP11.5□□□□□ -0.57
ATG4B-219ENST00000479941 COPB1P53618 953 aaKnown RBP11.5□□□□□ -0.57
ATG4B-219ENST00000479941 RAD23BP54727 409 aa11.5□□□□□ -0.57
ATG4B-219ENST00000479941 MFAP3P55082 362 aa11.5□□□□□ -0.57
ATG4B-219ENST00000479941 TPM4P67936 248 aa11.5□□□□□ -0.57
ATG4B-219ENST00000479941 NTHL1P78549 312 aa11.5□□□□□ -0.57
ATG4B-219ENST00000479941 DDR2Q16832 855 aa11.5□□□□□ -0.57
ATG4B-219ENST00000479941 FKBP15Q5T1M5 1219 aa11.5□□□□□ -0.57
ATG4B-219ENST00000479941 TMEM270Q6UE05 265 aa11.5□□□□□ -0.57
ATG4B-219ENST00000479941 PAQR9Q6ZVX9 377 aa11.5□□□□□ -0.57
ATG4B-219ENST00000479941 GET4Q7L5D6 327 aaPredicted RBP11.5□□□□□ -0.57
ATG4B-219ENST00000479941 FAM35AQ86V20 835 aa11.5□□□□□ -0.57
ATG4B-219ENST00000479941 ARHGEF19Q8IW93 802 aa11.5□□□□□ -0.57
ATG4B-219ENST00000479941 FUKQ8N0W3 1084 aa11.5□□□□□ -0.57
ATG4B-219ENST00000479941 GJD3Q8N144 294 aa11.5□□□□□ -0.57
ATG4B-219ENST00000479941 C12orf29Q8N999 325 aa11.5□□□□□ -0.57
ATG4B-219ENST00000479941 TDRD5Q8NAT2 981 aaKnown RBP11.5□□□□□ -0.57
ATG4B-219ENST00000479941 SLC2A14Q8TDB8 520 aa11.5□□□□□ -0.57
ATG4B-219ENST00000479941 GIPC2Q8TF65 315 aa11.5□□□□□ -0.57
ATG4B-219ENST00000479941 KAT5Q92993 513 aa11.5□□□□□ -0.57
ATG4B-219ENST00000479941 CYFIP2Q96F07 1278 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms