RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 CHI3L1P36222 383 aaPredicted RBP5.63□□□□□ -1.51
USF3-202ENST00000478658 ACADSBP45954 432 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 MSLNQ13421 630 aaPredicted RBP5.63□□□□□ -1.51
USF3-202ENST00000478658 FAM133BQ5BKY9 247 aaKnown RBP5.63□□□□□ -1.51
USF3-202ENST00000478658 IRGCQ6NXR0 463 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 TTC29Q8NA56 475 aaPredicted RBP5.63□□□□□ -1.51
USF3-202ENST00000478658 ZSCAN1Q8NBB4 408 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 C3orf20Q8ND61 904 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 CCDC17Q96LX7 622 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 HDHD2Q9H0R4 259 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 TAF1DQ9H5J8 278 aaPredicted RBP5.63□□□□□ -1.51
USF3-202ENST00000478658 NMRK2Q9NPI5 230 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 EIF3LQ9Y262 564 aaKnown RBP5.63□□□□□ -1.51
USF3-202ENST00000478658 PCDHA1Q9Y5I3 950 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 KBTBD13C9JR72 458 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 E9PBE3 544 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 TRIM66O15016 1216 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 PARNO95453 639 aaKnown RBP5.63□□□□□ -1.51
USF3-202ENST00000478658 RRM1P23921 792 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 YWHABP31946 246 aaKnown RBP5.63□□□□□ -1.51
USF3-202ENST00000478658 ACTR2P61160 394 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 COPZ1P61923 177 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 TUBA3CQ13748 450 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 BYSLQ13895 437 aaKnown RBP5.63□□□□□ -1.51
USF3-202ENST00000478658 SYT16Q17RD7 645 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 CCDC184Q52MB2 194 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 PPM1LQ5SGD2 360 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 STOX1Q6ZVD7 989 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 SETD9Q8NE22 299 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 MRRFQ96E11 262 aaKnown RBP5.63□□□□□ -1.51
USF3-202ENST00000478658 MXD3Q9BW11 206 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 GOLGA4Q13439 2230 aaKnown RBP5.62□□□□□ -1.51
USF3-202ENST00000478658 TEX13CA0A0J9YWL9 993 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 GRID2IPA4D2P6 1211 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 ASNA1O43681 348 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 RARAP10276 462 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 PPIL2Q13356 520 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 TCHHL1Q5QJ38 904 aaPredicted RBP5.62□□□□□ -1.51
USF3-202ENST00000478658 ATXN7L2Q5T6C5 722 aaPredicted RBP5.62□□□□□ -1.51
USF3-202ENST00000478658 BEND5Q7L4P6 421 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 WDSUB1Q8N9V3 476 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 DDHD1Q8NEL9 900 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 PIK3R5Q8WYR1 880 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 TMEM68Q96MH6 324 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 ANTXR1Q9H6X2 564 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 SPINK5Q9NQ38 1064 aaPredicted RBP5.62□□□□□ -1.51
USF3-202ENST00000478658 PIH1D3Q9NQM4 214 aaKnown RBP5.62□□□□□ -1.51
USF3-202ENST00000478658 NKIRAS2Q9NYR9 191 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 TBC1D14Q9P2M4 693 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 SLC39A10Q9ULF5 831 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 WASF3Q9UPY6 502 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 PKP3Q9Y446 797 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 CDY2AQ9Y6F7 541 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 CDY1Q9Y6F8 540 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 ANKRD36BQ8N2N9 1353 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 ARAP1Q96P48 1450 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 EMSYQ7Z589 1322 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 PCDH11XQ9BZA7 1347 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 PCDH11YQ9BZA8 1340 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 HSBP1L1C9JCN9 74 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 CCDC188H7C350 402 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 H7C4K7 107 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 PEX14O75381 377 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 BCL10O95999 233 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 ATP5BP06576 529 aaKnown RBP5.62□□□□□ -1.51
USF3-202ENST00000478658 CRKP46108 304 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 ARFIP1P53367 373 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 ARF3P61204 181 aaPredicted RBP5.62□□□□□ -1.51
USF3-202ENST00000478658 ARF1P84077 181 aaKnown RBP5.62□□□□□ -1.51
USF3-202ENST00000478658 AKAP4Q5JQC9 854 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 LRRC74BQ6ZQY2 392 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 CROCCP3Q8IVE0 287 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 MOV10L1Q9BXT6 1211 aaKnown RBP5.62□□□□□ -1.51
USF3-202ENST00000478658 CATSPERBQ9H7T0 1116 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 PCDHB16Q9NRJ7 776 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 PFDN2Q9UHV9 154 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 CCDC88CQ9P219 2028 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 DNALI1O14645 258 aaPredicted RBP5.62□□□□□ -1.51
USF3-202ENST00000478658 CLOCKO15516 846 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 GAS2O43903 313 aaKnown RBP5.62□□□□□ -1.51
USF3-202ENST00000478658 SLC25A12O75746 678 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 CSH1P0DML2 217 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 CSH2P0DML3 217 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 RAD23AP54725 363 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 NAGLUP54802 743 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 FNBP1LQ5T0N5 605 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 TRMT1LQ7Z2T5 733 aaKnown RBP5.62□□□□□ -1.51
USF3-202ENST00000478658 YTHDF3Q7Z739 585 aaKnown RBP5.62□□□□□ -1.51
USF3-202ENST00000478658 ZBTB9Q96C00 473 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 TCF25Q9BQ70 676 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 TIPINQ9BVW5 301 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 CST11Q9H112 138 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 CCDC59Q9P031 241 aaKnown RBP5.62□□□□□ -1.51
USF3-202ENST00000478658 LRWD1Q9UFC0 647 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 CARD8Q9Y2G2 431 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 ERBINQ96RT1 1412 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 MYO3BQ8WXR4 1341 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 ZNF879B4DU55 563 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 KPNA4O00629 521 aaPredicted RBP5.62□□□□□ -1.51
USF3-202ENST00000478658 GTPBP6O43824 516 aaPredicted RBP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms