RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 PCDHB1Q9Y5F3 818 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 HTTP42858 3142 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 ZNF142P52746 1687 aaPredicted RBP3.13□□□□□ -1.91
HMGN4-202ENST00000477243 AGLP35573 1532 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 ZFYVE26Q68DK2 2539 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 MSH6P52701 1360 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 IQGAP2Q13576 1575 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 TLN1Q9Y490 2541 aaKnown RBP3.12□□□□□ -1.91
HMGN4-202ENST00000477243 OTOGLQ3ZCN5 2332 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 FAM234BA2RU67 622 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 SH2B2O14492 632 aaPredicted RBP3.12□□□□□ -1.91
HMGN4-202ENST00000477243 PIP5K1BO14986 540 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 TMPRSS2O15393 492 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 IPO8O15397 1037 aaKnown RBP3.12□□□□□ -1.91
HMGN4-202ENST00000477243 ASAP2O43150 1006 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 STX6O43752 255 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 ZBTB14O43829 449 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 FMO6PO60774 539 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 KERAO60938 352 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 TBX10O75333 385 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 USP2O75604 605 aaPredicted RBP3.12□□□□□ -1.91
HMGN4-202ENST00000477243 RGS9O75916 674 aaPredicted RBP3.12□□□□□ -1.91
HMGN4-202ENST00000477243 PIAS2O75928 621 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 ZBTB7AO95365 584 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 TNFRSF6BO95407 300 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 GLP2RO95838 553 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 ANXA1P04083 346 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 CLEC3BP05452 202 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 PCP11498 1178 aaKnown RBP3.12□□□□□ -1.91
HMGN4-202ENST00000477243 ABCD3P28288 659 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 CDC25BP30305 580 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 GJA4P35212 333 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 DEKP35659 375 aaKnown RBP3.12□□□□□ -1.91
HMGN4-202ENST00000477243 PGM1P36871 562 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 EIF2DP41214 584 aaKnown RBP3.12□□□□□ -1.91
HMGN4-202ENST00000477243 SLC19A1P41440 591 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 MCAMP43121 646 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 KCNC1P48547 511 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 ARFIP2P53365 341 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 HERVK_113P62684 666 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 PPA1Q15181 289 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 SEC23BQ15437 767 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 CHRNA2Q15822 529 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 ADRM1Q16186 407 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 C3orf38Q5JPI3 329 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 PLEKHS1Q5SXH7 462 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 LIN54Q6MZP7 749 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 GPAT2Q6NUI2 795 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 LETMD1Q6P1Q0 360 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 INO80CQ6PI98 192 aaPredicted RBP3.12□□□□□ -1.91
HMGN4-202ENST00000477243 NUP54Q7Z3B4 507 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 CCDC186Q7Z3E2 898 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 SZRD1Q7Z422 152 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 THAP5Q7Z6K1 395 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 SYT9Q86SS6 491 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 CEP97Q8IW35 865 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 VGLL2Q8N8G2 317 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 GLIS1Q8NBF1 620 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 DENND6BQ8NEG7 585 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 CTCFLQ8NI51 663 aaPredicted RBP3.12□□□□□ -1.91
HMGN4-202ENST00000477243 BICD2Q8TD16 824 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 BRIX1Q8TDN6 353 aaKnown RBP3.12□□□□□ -1.91
HMGN4-202ENST00000477243 DCAF11Q8TEB1 546 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 TSPEARQ8WU66 669 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 CTNNBL1Q8WYA6 563 aaPredicted RBP3.12□□□□□ -1.91
HMGN4-202ENST00000477243 DDX17Q92841 729 aaKnown RBP3.12□□□□□ -1.91
HMGN4-202ENST00000477243 TNFRSF25Q93038 417 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 FAM162AQ96A26 154 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 VPS39Q96JC1 886 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 FANCD2OSQ96PS1 177 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 UHRF1Q96T88 793 aaPredicted RBP3.12□□□□□ -1.91
HMGN4-202ENST00000477243 LPIN3Q9BQK8 851 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 REEP2Q9BRK0 252 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 RTKNQ9BST9 563 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 MCMBPQ9BTE3 642 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 MAK16Q9BXY0 300 aaKnown RBP3.12□□□□□ -1.91
HMGN4-202ENST00000477243 OSBPL6Q9BZF3 934 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 NT5C3AQ9H0P0 336 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 C1orf21Q9H246 121 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 TNMDQ9H2S6 317 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 RANBP17Q9H2T7 1088 aaKnown RBP3.12□□□□□ -1.91
HMGN4-202ENST00000477243 ABHD16BQ9H3Z7 469 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 RNPEPQ9H4A4 650 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 SMARCAD1Q9H4L7 1026 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 PIDD1Q9HB75 910 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 GJB4Q9NTQ9 266 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 KCTD5Q9NXV2 234 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 TAS2R10Q9NYW0 307 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 RGL1Q9NZL6 768 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 NDUFAF4Q9P032 175 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 CALCOCO1Q9P1Z2 691 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 IGSF9Q9P2J2 1179 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 SUCLA2Q9P2R7 463 aaPredicted RBP3.12□□□□□ -1.91
HMGN4-202ENST00000477243 EXTL2Q9UBQ6 330 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 CHORDC1Q9UHD1 332 aaPredicted RBP3.12□□□□□ -1.91
HMGN4-202ENST00000477243 EIF2B4Q9UI10 523 aaKnown RBP3.12□□□□□ -1.91
HMGN4-202ENST00000477243 PRSS50Q9UI38 385 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 CPA4Q9UI42 421 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 CA14Q9ULX7 337 aa3.12□□□□□ -1.91
HMGN4-202ENST00000477243 SLC6A14Q9UN76 642 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 443.4 ms