RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 ARFGAP1Q8N6T3 406 aa6.58□□□□□ -1.36
CLK1-210ENST00000473565 LRRC52Q8N7C0 313 aa6.58□□□□□ -1.36
CLK1-210ENST00000473565 C3orf20Q8ND61 904 aa6.58□□□□□ -1.36
CLK1-210ENST00000473565 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.58□□□□□ -1.36
CLK1-210ENST00000473565 CLEC4CQ8WTT0 213 aa6.58□□□□□ -1.36
CLK1-210ENST00000473565 PPP1R10Q96QC0 940 aaKnown RBP6.58□□□□□ -1.36
CLK1-210ENST00000473565 ADAM2Q99965 735 aa6.58□□□□□ -1.36
CLK1-210ENST00000473565 MIS12Q9H081 205 aa6.58□□□□□ -1.36
CLK1-210ENST00000473565 LHX5Q9H2C1 402 aa6.58□□□□□ -1.36
CLK1-210ENST00000473565 ZWILCHQ9H900 591 aa6.58□□□□□ -1.36
CLK1-210ENST00000473565 CHST7Q9NS84 486 aa6.58□□□□□ -1.36
CLK1-210ENST00000473565 PCSK1NQ9UHG2 260 aa6.58□□□□□ -1.36
CLK1-210ENST00000473565 CCDC188H7C350 402 aa6.57□□□□□ -1.36
CLK1-210ENST00000473565 CLDN5O00501 218 aa6.57□□□□□ -1.36
CLK1-210ENST00000473565 STAU1O95793 577 aaKnown RBP6.57□□□□□ -1.36
CLK1-210ENST00000473565 ATF7P17544 494 aaPredicted RBP6.57□□□□□ -1.36
CLK1-210ENST00000473565 PSMA2P25787 234 aa6.57□□□□□ -1.36
CLK1-210ENST00000473565 TKTP29401 623 aaKnown RBP6.57□□□□□ -1.36
CLK1-210ENST00000473565 ECHS1P30084 290 aa6.57□□□□□ -1.36
CLK1-210ENST00000473565 FLT3P36888 993 aa6.57□□□□□ -1.36
CLK1-210ENST00000473565 GNL1P36915 607 aaPredicted RBP6.57□□□□□ -1.36
CLK1-210ENST00000473565 TAF6P49848 677 aa6.57□□□□□ -1.36
CLK1-210ENST00000473565 DR1Q01658 176 aa6.57□□□□□ -1.36
CLK1-210ENST00000473565 PDE4CQ08493 712 aa6.57□□□□□ -1.36
CLK1-210ENST00000473565 MBTPS1Q14703 1052 aa6.57□□□□□ -1.36
CLK1-210ENST00000473565 CDO1Q16878 200 aa6.57□□□□□ -1.36
CLK1-210ENST00000473565 TRIM71Q2Q1W2 868 aaKnown RBP6.57□□□□□ -1.36
CLK1-210ENST00000473565 WSCD1Q658N2 575 aa6.57□□□□□ -1.36
CLK1-210ENST00000473565 OR6B2Q6IFH4 312 aa6.57□□□□□ -1.36
CLK1-210ENST00000473565 PRUNE1Q86TP1 453 aa6.57□□□□□ -1.36
CLK1-210ENST00000473565 SCUBE3Q8IX30 993 aa6.57□□□□□ -1.36
CLK1-210ENST00000473565 KRT222Q8N1A0 295 aa6.57□□□□□ -1.36
CLK1-210ENST00000473565 PCSK9Q8NBP7 692 aaKnown RBP6.57□□□□□ -1.36
CLK1-210ENST00000473565 RAPGEF5Q92565 580 aa6.57□□□□□ -1.36
CLK1-210ENST00000473565 NDRG1Q92597 394 aaKnown RBP6.57□□□□□ -1.36
CLK1-210ENST00000473565 HAUS1Q96CS2 278 aa6.57□□□□□ -1.36
CLK1-210ENST00000473565 ZNF518BQ9C0D4 1074 aa6.57□□□□□ -1.36
CLK1-210ENST00000473565 TSPYL2Q9H2G4 693 aaPredicted RBP6.57□□□□□ -1.36
CLK1-210ENST00000473565 IP6K2Q9UHH9 426 aa6.57□□□□□ -1.36
CLK1-210ENST00000473565 TRIM17Q9Y577 477 aa6.57□□□□□ -1.36
CLK1-210ENST00000473565 A0A1W2PQ45 241 aaPredicted RBP6.57□□□□□ -1.36
CLK1-210ENST00000473565 A0A1W2PQY0 241 aa6.57□□□□□ -1.36
CLK1-210ENST00000473565 PHF2O75151 1096 aa6.57□□□□□ -1.36
CLK1-210ENST00000473565 CD4P01730 458 aa6.57□□□□□ -1.36
CLK1-210ENST00000473565 IL1R2P27930 398 aa6.57□□□□□ -1.36
CLK1-210ENST00000473565 CST5P28325 142 aaPredicted RBP6.57□□□□□ -1.36
CLK1-210ENST00000473565 HOXD10P28358 340 aa6.57□□□□□ -1.36
CLK1-210ENST00000473565 OAS2P29728 719 aaKnown RBP6.57□□□□□ -1.36
CLK1-210ENST00000473565 NKX3-2P78367 333 aa6.57□□□□□ -1.36
CLK1-210ENST00000473565 SMC1AQ14683 1233 aaKnown RBP6.57□□□□□ -1.36
CLK1-210ENST00000473565 TRIP13Q15645 432 aaPredicted RBP6.57□□□□□ -1.36
CLK1-210ENST00000473565 C15orf59Q2T9L4 293 aaPredicted RBP6.57□□□□□ -1.36
CLK1-210ENST00000473565 GLE1Q53GS7 698 aaKnown RBP6.57□□□□□ -1.36
CLK1-210ENST00000473565 CCDC137Q6PK04 289 aaKnown RBP6.57□□□□□ -1.36
CLK1-210ENST00000473565 LCLAT1Q6UWP7 414 aa6.57□□□□□ -1.36
CLK1-210ENST00000473565 MFSD7Q6UXD7 560 aa6.57□□□□□ -1.36
CLK1-210ENST00000473565 RHOT1Q8IXI2 618 aa6.57□□□□□ -1.36
CLK1-210ENST00000473565 ADGRF2Q8IZF7 708 aa6.57□□□□□ -1.36
CLK1-210ENST00000473565 APPL2Q8NEU8 664 aa6.57□□□□□ -1.36
CLK1-210ENST00000473565 SLC2A14Q8TDB8 520 aa6.57□□□□□ -1.36
CLK1-210ENST00000473565 GLT1D1Q96MS3 346 aa6.57□□□□□ -1.36
CLK1-210ENST00000473565 PRDM10Q9NQV6 1147 aa6.57□□□□□ -1.36
CLK1-210ENST00000473565 HPCAL4Q9UM19 191 aa6.57□□□□□ -1.36
CLK1-210ENST00000473565 SNX24Q9Y343 169 aa6.57□□□□□ -1.36
CLK1-210ENST00000473565 TET1Q8NFU7 2136 aa6.57□□□□□ -1.36
CLK1-210ENST00000473565 GOLGA6L10A0A0M3HER8 536 aa6.57□□□□□ -1.36
CLK1-210ENST00000473565 CYB561D2O14569 222 aa6.57□□□□□ -1.36
CLK1-210ENST00000473565 KRT1P04264 644 aa6.57□□□□□ -1.36
CLK1-210ENST00000473565 MCM3P25205 808 aa6.57□□□□□ -1.36
CLK1-210ENST00000473565 GRK4P32298 578 aa6.57□□□□□ -1.36
CLK1-210ENST00000473565 SLC1A1P43005 524 aa6.57□□□□□ -1.36
CLK1-210ENST00000473565 PTGIRP43119 386 aa6.57□□□□□ -1.36
CLK1-210ENST00000473565 MAP9Q49MG5 647 aa6.57□□□□□ -1.36
CLK1-210ENST00000473565 KIAA0319Q5VV43 1072 aa6.57□□□□□ -1.36
CLK1-210ENST00000473565 JAMLQ86YT9 394 aa6.57□□□□□ -1.36
CLK1-210ENST00000473565 ZNF560Q96MR9 790 aa6.57□□□□□ -1.36
CLK1-210ENST00000473565 SNX25Q9H3E2 840 aa6.57□□□□□ -1.36
CLK1-210ENST00000473565 SLITRK6Q9H5Y7 841 aa6.57□□□□□ -1.36
CLK1-210ENST00000473565 HMX1Q9NP08 348 aaPredicted RBP6.57□□□□□ -1.36
CLK1-210ENST00000473565 LRRD1A4D1F6 860 aa6.56□□□□□ -1.36
CLK1-210ENST00000473565 SIGLEC16A6NMB1 481 aa6.56□□□□□ -1.36
CLK1-210ENST00000473565 GPR182O15218 404 aa6.56□□□□□ -1.36
CLK1-210ENST00000473565 HUS1O60921 280 aa6.56□□□□□ -1.36
CLK1-210ENST00000473565 FKTNO75072 461 aa6.56□□□□□ -1.36
CLK1-210ENST00000473565 LRCH4O75427 683 aa6.56□□□□□ -1.36
CLK1-210ENST00000473565 TUBBP07437 444 aa6.56□□□□□ -1.36
CLK1-210ENST00000473565 CD48P09326 243 aa6.56□□□□□ -1.36
CLK1-210ENST00000473565 CKBP12277 381 aa6.56□□□□□ -1.36
CLK1-210ENST00000473565 LCP1P13796 627 aa6.56□□□□□ -1.36
CLK1-210ENST00000473565 TFE3P19532 575 aaPredicted RBP6.56□□□□□ -1.36
CLK1-210ENST00000473565 YY1P25490 414 aa6.56□□□□□ -1.36
CLK1-210ENST00000473565 VPS41P49754 854 aa6.56□□□□□ -1.36
CLK1-210ENST00000473565 DYNLT1P63172 113 aa6.56□□□□□ -1.36
CLK1-210ENST00000473565 ATP11AP98196 1134 aa6.56□□□□□ -1.36
CLK1-210ENST00000473565 MTFR1Q15390 333 aa6.56□□□□□ -1.36
CLK1-210ENST00000473565 CTU1Q7Z7A3 348 aaKnown RBP6.56□□□□□ -1.36
CLK1-210ENST00000473565 CCDC105Q8IYK2 499 aa6.56□□□□□ -1.36
CLK1-210ENST00000473565 CCDC26Q8TAB7 109 aa6.56□□□□□ -1.36
CLK1-210ENST00000473565 SENP8Q96LD8 212 aa6.56□□□□□ -1.36
CLK1-210ENST00000473565 NAP1L3Q99457 506 aaPredicted RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms