RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	HEBP1	Q9NRV9	189 aa		13.62	□□□□□ -0.23
FDPS-204	ENST00000461507	LMBRD1	Q9NUN5	540 aa		13.62	□□□□□ -0.23
FDPS-204	ENST00000461507	DMAC2	Q9NW81	257 aa		13.62	□□□□□ -0.23
FDPS-204	ENST00000461507	SIX4	Q9UIU6	781 aa		13.62	□□□□□ -0.23
FDPS-204	ENST00000461507	MRPS17	Q9Y2R5	130 aa	Known RBP	13.62	□□□□□ -0.23
FDPS-204	ENST00000461507	CACNA1A	O00555	2505 aa		13.61	□□□□□ -0.23
FDPS-204	ENST00000461507		A0A1W2PRU2	124 aa		13.61	□□□□□ -0.23
FDPS-204	ENST00000461507	FAM170B	A6NMN3	283 aa		13.61	□□□□□ -0.23
FDPS-204	ENST00000461507	MAN2B1	O00754	1011 aa		13.61	□□□□□ -0.23
FDPS-204	ENST00000461507	AKAP3	O75969	853 aa		13.61	□□□□□ -0.23
FDPS-204	ENST00000461507	ATF6	P18850	670 aa		13.61	□□□□□ -0.23
FDPS-204	ENST00000461507	VIPR2	P41587	438 aa		13.61	□□□□□ -0.23
FDPS-204	ENST00000461507	TUFM	P49411	452 aa	Known RBP	13.61	□□□□□ -0.23
FDPS-204	ENST00000461507	VAMP7	P51809	220 aa		13.61	□□□□□ -0.23
FDPS-204	ENST00000461507	DLG4	P78352	724 aa		13.61	□□□□□ -0.23
FDPS-204	ENST00000461507	ZNF699	Q32M78	642 aa		13.61	□□□□□ -0.23
FDPS-204	ENST00000461507	EDRF1	Q3B7T1	1238 aa		13.61	□□□□□ -0.23
FDPS-204	ENST00000461507	CCDC40	Q4G0X9	1142 aa		13.61	□□□□□ -0.23
FDPS-204	ENST00000461507	SCARA5	Q6ZMJ2	495 aa		13.61	□□□□□ -0.23
FDPS-204	ENST00000461507	ZNF852	Q6ZMS4	543 aa		13.61	□□□□□ -0.23
FDPS-204	ENST00000461507	MAMSTR	Q6ZN01	415 aa		13.61	□□□□□ -0.23
FDPS-204	ENST00000461507	INTS8	Q75QN2	995 aa	Known RBP	13.61	□□□□□ -0.23
FDPS-204	ENST00000461507	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	13.61	□□□□□ -0.23
FDPS-204	ENST00000461507	ITIH5	Q86UX2	942 aa		13.61	□□□□□ -0.23
FDPS-204	ENST00000461507	CREBRF	Q8IUR6	639 aa		13.61	□□□□□ -0.23
FDPS-204	ENST00000461507	ADGRF2	Q8IZF7	708 aa		13.61	□□□□□ -0.23
FDPS-204	ENST00000461507	ADSSL1	Q8N142	457 aa		13.61	□□□□□ -0.23
FDPS-204	ENST00000461507	SPATA20	Q8TB22	786 aa		13.61	□□□□□ -0.23
FDPS-204	ENST00000461507	SPATA18	Q8TC71	538 aa		13.61	□□□□□ -0.23
FDPS-204	ENST00000461507	SPPL2B	Q8TCT7	592 aa		13.61	□□□□□ -0.23
FDPS-204	ENST00000461507	PLEKHO2	Q8TD55	490 aa		13.61	□□□□□ -0.23
FDPS-204	ENST00000461507	PARD3B	Q8TEW8	1205 aa		13.61	□□□□□ -0.23
FDPS-204	ENST00000461507	RSPRY1	Q96DX4	576 aa		13.61	□□□□□ -0.23
FDPS-204	ENST00000461507	MSANTD3	Q96H12	275 aa		13.61	□□□□□ -0.23
FDPS-204	ENST00000461507	IER2	Q9BTL4	223 aa		13.61	□□□□□ -0.23
FDPS-204	ENST00000461507	IL21	Q9HBE4	155 aa		13.61	□□□□□ -0.23
FDPS-204	ENST00000461507	PRMT8	Q9NR22	394 aa	Predicted RBP	13.61	□□□□□ -0.23
FDPS-204	ENST00000461507	OBP2A	Q9NY56	170 aa		13.61	□□□□□ -0.23
FDPS-204	ENST00000461507	KIAA1468	Q9P260	1216 aa		13.61	□□□□□ -0.23
FDPS-204	ENST00000461507	NXF1	Q9UBU9	619 aa	Known RBP	13.61	□□□□□ -0.23
FDPS-204	ENST00000461507		R4GN57	208 aa		13.61	□□□□□ -0.23
FDPS-204	ENST00000461507	PTPRD	P23468	1912 aa		13.6	□□□□□ -0.23
FDPS-204	ENST00000461507	BICDL2	A1A5D9	508 aa		13.6	□□□□□ -0.23
FDPS-204	ENST00000461507	HEPACAM2	A8MVW5	462 aa		13.6	□□□□□ -0.23
FDPS-204	ENST00000461507	NCAM2	O15394	837 aa		13.6	□□□□□ -0.23
FDPS-204	ENST00000461507	LMNA	P02545	664 aa	Known RBP	13.6	□□□□□ -0.23
FDPS-204	ENST00000461507	CD44	P16070	742 aa	Known RBP	13.6	□□□□□ -0.23
FDPS-204	ENST00000461507	CD72	P21854	359 aa		13.6	□□□□□ -0.23
FDPS-204	ENST00000461507	CCNE1	P24864	410 aa		13.6	□□□□□ -0.23
FDPS-204	ENST00000461507	GDI1	P31150	447 aa		13.6	□□□□□ -0.23
FDPS-204	ENST00000461507	AP3M2	P53677	418 aa		13.6	□□□□□ -0.23
FDPS-204	ENST00000461507	PMS1	P54277	932 aa	Known RBP	13.6	□□□□□ -0.23
FDPS-204	ENST00000461507	MYL7	Q01449	175 aa		13.6	□□□□□ -0.23
FDPS-204	ENST00000461507	TSPY1	Q01534	308 aa		13.6	□□□□□ -0.23
FDPS-204	ENST00000461507	LRRC63	Q05C16	580 aa		13.6	□□□□□ -0.23
FDPS-204	ENST00000461507	PAK1	Q13153	545 aa		13.6	□□□□□ -0.23
FDPS-204	ENST00000461507	MORC3	Q14149	939 aa		13.6	□□□□□ -0.23
FDPS-204	ENST00000461507	SLC39A12	Q504Y0	691 aa		13.6	□□□□□ -0.23
FDPS-204	ENST00000461507	STXBP5	Q5T5C0	1151 aa		13.6	□□□□□ -0.23
FDPS-204	ENST00000461507	ANKRD40	Q6AI12	368 aa		13.6	□□□□□ -0.23
FDPS-204	ENST00000461507	SCARA3	Q6AZY7	606 aa		13.6	□□□□□ -0.23
FDPS-204	ENST00000461507	DHTKD1	Q96HY7	919 aa	Predicted RBP	13.6	□□□□□ -0.23
FDPS-204	ENST00000461507	IMPG2	Q9BZV3	1241 aa		13.6	□□□□□ -0.23
FDPS-204	ENST00000461507	CHRD	Q9H2X0	955 aa		13.6	□□□□□ -0.23
FDPS-204	ENST00000461507	DDX43	Q9NXZ2	648 aa	Known RBP	13.6	□□□□□ -0.23
FDPS-204	ENST00000461507	SLC27A5	Q9Y2P5	690 aa		13.6	□□□□□ -0.23
FDPS-204	ENST00000461507	CEP250	Q9BV73	2442 aa		13.59	□□□□□ -0.23
FDPS-204	ENST00000461507	GREB1	Q4ZG55	1949 aa		13.59	□□□□□ -0.23
FDPS-204	ENST00000461507	CHAD	O15335	359 aa		13.59	□□□□□ -0.23
FDPS-204	ENST00000461507	LAMTOR5	O43504	91 aa		13.59	□□□□□ -0.23
FDPS-204	ENST00000461507	SOAT2	O75908	522 aa		13.59	□□□□□ -0.23
FDPS-204	ENST00000461507	HAPLN1	P10915	354 aa	Predicted RBP	13.59	□□□□□ -0.23
FDPS-204	ENST00000461507	ACAT1	P24752	427 aa	Known RBP	13.59	□□□□□ -0.23
FDPS-204	ENST00000461507	GCLM	P48507	274 aa		13.59	□□□□□ -0.23
FDPS-204	ENST00000461507	MYL6	P60660	151 aa		13.59	□□□□□ -0.23
FDPS-204	ENST00000461507	FKBP3	Q00688	224 aa	Known RBP	13.59	□□□□□ -0.23
FDPS-204	ENST00000461507	NCOA4	Q13772	614 aa		13.59	□□□□□ -0.23
FDPS-204	ENST00000461507	NFIL3	Q16649	462 aa		13.59	□□□□□ -0.23
FDPS-204	ENST00000461507	TPD52L1	Q16890	204 aa	Predicted RBP	13.59	□□□□□ -0.23
FDPS-204	ENST00000461507	WDR72	Q3MJ13	1102 aa		13.59	□□□□□ -0.23
FDPS-204	ENST00000461507	ZCWPW2	Q504Y3	356 aa		13.59	□□□□□ -0.23
FDPS-204	ENST00000461507	COBLL1	Q53SF7	1204 aa		13.59	□□□□□ -0.23
FDPS-204	ENST00000461507	TDRD10	Q5VZ19	366 aa	Known RBP	13.59	□□□□□ -0.23
FDPS-204	ENST00000461507	CLEC17A	Q6ZS10	378 aa		13.59	□□□□□ -0.23
FDPS-204	ENST00000461507	LIMS2	Q7Z4I7	341 aa		13.59	□□□□□ -0.23
FDPS-204	ENST00000461507	LRRTM3	Q86VH5	581 aa		13.59	□□□□□ -0.23
FDPS-204	ENST00000461507	PDCL2	Q8N4E4	241 aa		13.59	□□□□□ -0.23
FDPS-204	ENST00000461507	TRIML1	Q8N9V2	468 aa		13.59	□□□□□ -0.23
FDPS-204	ENST00000461507	ZBTB44	Q8NCP5	570 aa		13.59	□□□□□ -0.23
FDPS-204	ENST00000461507	CCDC150	Q8NCX0	1101 aa		13.59	□□□□□ -0.23
FDPS-204	ENST00000461507	FAM200A	Q8TCP9	573 aa		13.59	□□□□□ -0.23
FDPS-204	ENST00000461507	TMC2	Q8TDI7	906 aa		13.59	□□□□□ -0.23
FDPS-204	ENST00000461507	ZNF516	Q92618	1163 aa		13.59	□□□□□ -0.23
FDPS-204	ENST00000461507	SYAP1	Q96A49	352 aa	Predicted RBP	13.59	□□□□□ -0.23
FDPS-204	ENST00000461507	ELMO3	Q96BJ8	720 aa		13.59	□□□□□ -0.23
FDPS-204	ENST00000461507	PKMYT1	Q99640	499 aa		13.59	□□□□□ -0.23
FDPS-204	ENST00000461507	SEPT5	Q99719	369 aa	Predicted RBP	13.59	□□□□□ -0.23
FDPS-204	ENST00000461507	LPIN3	Q9BQK8	851 aa		13.59	□□□□□ -0.23
FDPS-204	ENST00000461507	SNX25	Q9H3E2	840 aa		13.59	□□□□□ -0.23
FDPS-204	ENST00000461507	SPATA6	Q9NWH7	488 aa	Predicted RBP	13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms