RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 COG8Q96MW5 612 aa4.84□□□□□ -1.63
HMGN3P1-201ENST00000453847 MED15Q96RN5 788 aa4.84□□□□□ -1.63
HMGN3P1-201ENST00000453847 TWNKQ96RR1 684 aa4.84□□□□□ -1.63
HMGN3P1-201ENST00000453847 GPR20Q99678 358 aa4.84□□□□□ -1.63
HMGN3P1-201ENST00000453847 RTKNQ9BST9 563 aa4.84□□□□□ -1.63
HMGN3P1-201ENST00000453847 CENPOQ9BU64 300 aa4.84□□□□□ -1.63
HMGN3P1-201ENST00000453847 TLR10Q9BXR5 811 aa4.84□□□□□ -1.63
HMGN3P1-201ENST00000453847 IMPG2Q9BZV3 1241 aa4.84□□□□□ -1.63
HMGN3P1-201ENST00000453847 NELFAQ9H3P2 528 aa4.84□□□□□ -1.63
HMGN3P1-201ENST00000453847 NSUN3Q9H649 340 aaKnown RBP4.84□□□□□ -1.63
HMGN3P1-201ENST00000453847 FSCN3Q9NQT6 498 aa4.84□□□□□ -1.63
HMGN3P1-201ENST00000453847 TBC1D22BQ9NU19 505 aa4.84□□□□□ -1.63
HMGN3P1-201ENST00000453847 POLG2Q9UHN1 485 aa4.84□□□□□ -1.63
HMGN3P1-201ENST00000453847 JAG2Q9Y219 1238 aa4.84□□□□□ -1.63
HMGN3P1-201ENST00000453847 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.84□□□□□ -1.63
HMGN3P1-201ENST00000453847 CCDC78A2IDD5 438 aa4.83□□□□□ -1.64
HMGN3P1-201ENST00000453847 EXOC5O00471 708 aa4.83□□□□□ -1.64
HMGN3P1-201ENST00000453847 CCP110O43303 1012 aa4.83□□□□□ -1.64
HMGN3P1-201ENST00000453847 RRP9O43818 475 aaKnown RBP4.83□□□□□ -1.64
HMGN3P1-201ENST00000453847 VPS4BO75351 444 aa4.83□□□□□ -1.64
HMGN3P1-201ENST00000453847 CHEK2O96017 543 aa4.83□□□□□ -1.64
HMGN3P1-201ENST00000453847 IGHA1P01876 353 aa4.83□□□□□ -1.64
HMGN3P1-201ENST00000453847 TPH1P17752 444 aa4.83□□□□□ -1.64
HMGN3P1-201ENST00000453847 ZNF134P52741 427 aa4.83□□□□□ -1.64
HMGN3P1-201ENST00000453847 GP2P55259 537 aaKnown RBP4.83□□□□□ -1.64
HMGN3P1-201ENST00000453847 NPEPPSP55786 919 aa4.83□□□□□ -1.64
HMGN3P1-201ENST00000453847 POLE2P56282 527 aa4.83□□□□□ -1.64
HMGN3P1-201ENST00000453847 CHRNDQ07001 517 aa4.83□□□□□ -1.64
HMGN3P1-201ENST00000453847 SCAPQ12770 1279 aa4.83□□□□□ -1.64
HMGN3P1-201ENST00000453847 GRM4Q14833 912 aa4.83□□□□□ -1.64
HMGN3P1-201ENST00000453847 PTCHD3Q3KNS1 767 aa4.83□□□□□ -1.64
HMGN3P1-201ENST00000453847 ADCK5Q3MIX3 580 aa4.83□□□□□ -1.64
HMGN3P1-201ENST00000453847 FAXCQ5TGI0 409 aa4.83□□□□□ -1.64
HMGN3P1-201ENST00000453847 METRNLQ641Q3 311 aa4.83□□□□□ -1.64
HMGN3P1-201ENST00000453847 MCTP2Q6DN12 878 aa4.83□□□□□ -1.64
HMGN3P1-201ENST00000453847 TMEM132EQ6IEE7 984 aa4.83□□□□□ -1.64
HMGN3P1-201ENST00000453847 BBS12Q6ZW61 710 aa4.83□□□□□ -1.64
HMGN3P1-201ENST00000453847 KRT73Q86Y46 540 aa4.83□□□□□ -1.64
HMGN3P1-201ENST00000453847 CCDC117Q8IWD4 279 aaPredicted RBP4.83□□□□□ -1.64
HMGN3P1-201ENST00000453847 GPR135Q8IZ08 494 aa4.83□□□□□ -1.64
HMGN3P1-201ENST00000453847 KLHL36Q8N4N3 616 aa4.83□□□□□ -1.64
HMGN3P1-201ENST00000453847 PDILTQ8N807 584 aa4.83□□□□□ -1.64
HMGN3P1-201ENST00000453847 RNF169Q8NCN4 708 aa4.83□□□□□ -1.64
HMGN3P1-201ENST00000453847 NSUN7Q8NE18 718 aaKnown RBP4.83□□□□□ -1.64
HMGN3P1-201ENST00000453847 CPT1CQ8TCG5 803 aa4.83□□□□□ -1.64
HMGN3P1-201ENST00000453847 CENPIQ92674 756 aaPredicted RBP4.83□□□□□ -1.64
HMGN3P1-201ENST00000453847 SDCCAG3Q96C92 435 aa4.83□□□□□ -1.64
HMGN3P1-201ENST00000453847 HVCN1Q96D96 273 aa4.83□□□□□ -1.64
HMGN3P1-201ENST00000453847 ZBTB10Q96DT7 871 aa4.83□□□□□ -1.64
HMGN3P1-201ENST00000453847 SLC46A1Q96NT5 459 aa4.83□□□□□ -1.64
HMGN3P1-201ENST00000453847 PPP1R9BQ96SB3 815 aa4.83□□□□□ -1.64
HMGN3P1-201ENST00000453847 BARD1Q99728 777 aaKnown RBP4.83□□□□□ -1.64
HMGN3P1-201ENST00000453847 CHCHD6Q9BRQ6 235 aa4.83□□□□□ -1.64
HMGN3P1-201ENST00000453847 TMEM168Q9H0V1 697 aa4.83□□□□□ -1.64
HMGN3P1-201ENST00000453847 VPS16Q9H269 839 aa4.83□□□□□ -1.64
HMGN3P1-201ENST00000453847 TAF1DQ9H5J8 278 aaPredicted RBP4.83□□□□□ -1.64
HMGN3P1-201ENST00000453847 ZBTB26Q9HCK0 441 aa4.83□□□□□ -1.64
HMGN3P1-201ENST00000453847 ZDHHC9Q9Y397 364 aa4.83□□□□□ -1.64
HMGN3P1-201ENST00000453847 OAS3Q9Y6K5 1087 aaKnown RBP4.83□□□□□ -1.64
HMGN3P1-201ENST00000453847 A0A1B0GTL3 188 aa4.82□□□□□ -1.64
HMGN3P1-201ENST00000453847 PMS2P1A4D2B8 440 aa4.82□□□□□ -1.64
HMGN3P1-201ENST00000453847 DRGXA6NNA5 263 aa4.82□□□□□ -1.64
HMGN3P1-201ENST00000453847 B5MCH6 92 aa4.82□□□□□ -1.64
HMGN3P1-201ENST00000453847 GFPT2O94808 682 aa4.82□□□□□ -1.64
HMGN3P1-201ENST00000453847 INMTO95050 263 aa4.82□□□□□ -1.64
HMGN3P1-201ENST00000453847 GLP2RO95838 553 aa4.82□□□□□ -1.64
HMGN3P1-201ENST00000453847 TK1P04183 234 aa4.82□□□□□ -1.64
HMGN3P1-201ENST00000453847 HSP90AA1P07900 732 aaKnown RBP4.82□□□□□ -1.64
HMGN3P1-201ENST00000453847 CYP21A2P08686 494 aa4.82□□□□□ -1.64
HMGN3P1-201ENST00000453847 CYP2C9P11712 490 aa4.82□□□□□ -1.64
HMGN3P1-201ENST00000453847 FCER1AP12319 257 aa4.82□□□□□ -1.64
HMGN3P1-201ENST00000453847 BCAT1P54687 386 aa4.82□□□□□ -1.64
HMGN3P1-201ENST00000453847 ACTR2P61160 394 aa4.82□□□□□ -1.64
HMGN3P1-201ENST00000453847 DLG4P78352 724 aa4.82□□□□□ -1.64
HMGN3P1-201ENST00000453847 NSUN2Q08J23 767 aaKnown RBP eCLIP4.82□□□□□ -1.64
HMGN3P1-201ENST00000453847 TRIM60Q495X7 471 aa4.82□□□□□ -1.64
HMGN3P1-201ENST00000453847 MRNIPQ6NTE8 343 aa4.82□□□□□ -1.64
HMGN3P1-201ENST00000453847 MPZL3Q6UWV2 235 aa4.82□□□□□ -1.64
HMGN3P1-201ENST00000453847 MED25Q71SY5 747 aa4.82□□□□□ -1.64
HMGN3P1-201ENST00000453847 ANKS1BQ7Z6G8 1248 aa4.82□□□□□ -1.64
HMGN3P1-201ENST00000453847 SYT12Q8IV01 421 aa4.82□□□□□ -1.64
HMGN3P1-201ENST00000453847 CFAP52Q8N1V2 620 aa4.82□□□□□ -1.64
HMGN3P1-201ENST00000453847 FITM2Q8N6M3 262 aa4.82□□□□□ -1.64
HMGN3P1-201ENST00000453847 C1orf131Q8NDD1 294 aaKnown RBP4.82□□□□□ -1.64
HMGN3P1-201ENST00000453847 FAM168AQ92567 244 aa4.82□□□□□ -1.64
HMGN3P1-201ENST00000453847 RSC1A1Q92681 617 aa4.82□□□□□ -1.64
HMGN3P1-201ENST00000453847 FAM227BQ96M60 508 aa4.82□□□□□ -1.64
HMGN3P1-201ENST00000453847 TRAPPC9Q96Q05 1148 aa4.82□□□□□ -1.64
HMGN3P1-201ENST00000453847 RBM15Q96T37 977 aaKnown RBP eCLIP4.82□□□□□ -1.64
HMGN3P1-201ENST00000453847 SLC46A2Q9BY10 475 aa4.82□□□□□ -1.64
HMGN3P1-201ENST00000453847 EPB41L4BQ9H329 900 aa4.82□□□□□ -1.64
HMGN3P1-201ENST00000453847 RNPEPQ9H4A4 650 aa4.82□□□□□ -1.64
HMGN3P1-201ENST00000453847 CA14Q9ULX7 337 aa4.82□□□□□ -1.64
HMGN3P1-201ENST00000453847 HPSEQ9Y251 543 aa4.82□□□□□ -1.64
HMGN3P1-201ENST00000453847 CDY1Q9Y6F8 540 aa4.82□□□□□ -1.64
HMGN3P1-201ENST00000453847 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.82□□□□□ -1.64
HMGN3P1-201ENST00000453847 SH3D21A4FU49 640 aa4.81□□□□□ -1.64
HMGN3P1-201ENST00000453847 BTBD11A6QL63 1104 aa4.81□□□□□ -1.64
HMGN3P1-201ENST00000453847 FFAR3O14843 346 aa4.81□□□□□ -1.64
HMGN3P1-201ENST00000453847 COQ9O75208 318 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms