RNA–Protein interactions for RNA: ENST00000443896.5

PIKFYVE-206, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best)

Gene PIKFYVE, Length 3,282 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-206ENST00000443896 MFSD7Q6UXD7 560 aa17.12■□□□□ 0.33
PIKFYVE-206ENST00000443896 YTHDF3Q7Z739 585 aaKnown RBP17.12■□□□□ 0.33
PIKFYVE-206ENST00000443896 STMN4Q9H169 189 aaPredicted RBP17.12■□□□□ 0.33
PIKFYVE-206ENST00000443896 SPON1Q9HCB6 807 aa17.12■□□□□ 0.33
PIKFYVE-206ENST00000443896 PNMA3Q9UL41 463 aa17.12■□□□□ 0.33
PIKFYVE-206ENST00000443896 STK38LQ9Y2H1 464 aa17.12■□□□□ 0.33
PIKFYVE-206ENST00000443896 EVPLQ92817 2033 aa17.11■□□□□ 0.33
PIKFYVE-206ENST00000443896 A8MUI8 341 aa17.11■□□□□ 0.33
PIKFYVE-206ENST00000443896 LACTBL1A8MY62 500 aa17.11■□□□□ 0.33
PIKFYVE-206ENST00000443896 MED7O43513 233 aa17.11■□□□□ 0.33
PIKFYVE-206ENST00000443896 KRT19P08727 400 aa17.11■□□□□ 0.33
PIKFYVE-206ENST00000443896 RAP1GAPP47736 663 aa17.11■□□□□ 0.33
PIKFYVE-206ENST00000443896 GJC2Q5T442 439 aaPredicted RBP17.11■□□□□ 0.33
PIKFYVE-206ENST00000443896 CYP4A22Q5TCH4 519 aa17.11■□□□□ 0.33
PIKFYVE-206ENST00000443896 MAMDC4Q6UXC1 1216 aa17.11■□□□□ 0.33
PIKFYVE-206ENST00000443896 CACNA2D3Q8IZS8 1091 aa17.11■□□□□ 0.33
PIKFYVE-206ENST00000443896 CXorf38Q8TB03 319 aa17.11■□□□□ 0.33
PIKFYVE-206ENST00000443896 GGA2Q9UJY4 613 aa17.11■□□□□ 0.33
PIKFYVE-206ENST00000443896 MAGEB2O15479 319 aa17.11■□□□□ 0.33
PIKFYVE-206ENST00000443896 LIASO43766 372 aa17.11■□□□□ 0.33
PIKFYVE-206ENST00000443896 TJP3O95049 919 aa17.11■□□□□ 0.33
PIKFYVE-206ENST00000443896 STAG3L1P0CL83 205 aa17.11■□□□□ 0.33
PIKFYVE-206ENST00000443896 KRT10P13645 584 aa17.11■□□□□ 0.33
PIKFYVE-206ENST00000443896 TNFAIP2Q03169 654 aa17.11■□□□□ 0.33
PIKFYVE-206ENST00000443896 LMNB2Q03252 620 aa17.11■□□□□ 0.33
PIKFYVE-206ENST00000443896 PTPN20Q4JDL3 420 aa17.11■□□□□ 0.33
PIKFYVE-206ENST00000443896 ERMARDQ5T6L9 678 aa17.11■□□□□ 0.33
PIKFYVE-206ENST00000443896 TTC4O95801 387 aa17.11■□□□□ 0.33
PIKFYVE-206ENST00000443896 RAD23BP54727 409 aa17.11■□□□□ 0.33
PIKFYVE-206ENST00000443896 WDR72Q3MJ13 1102 aa17.11■□□□□ 0.33
PIKFYVE-206ENST00000443896 SPOCD1Q6ZMY3 1216 aa17.11■□□□□ 0.33
PIKFYVE-206ENST00000443896 GPRC5AQ8NFJ5 357 aa17.11■□□□□ 0.33
PIKFYVE-206ENST00000443896 PPTC7Q8NI37 304 aa17.11■□□□□ 0.33
PIKFYVE-206ENST00000443896 AGAP11Q8TF27 550 aa17.11■□□□□ 0.33
PIKFYVE-206ENST00000443896 SDCBP2Q9H190 292 aa17.11■□□□□ 0.33
PIKFYVE-206ENST00000443896 PDZD7Q9H5P4 517 aa17.11■□□□□ 0.33
PIKFYVE-206ENST00000443896 VTA1Q9NP79 307 aa17.11■□□□□ 0.33
PIKFYVE-206ENST00000443896 DDX56Q9NY93 547 aaKnown RBP17.11■□□□□ 0.33
PIKFYVE-206ENST00000443896 CYTH4Q9UIA0 394 aa17.11■□□□□ 0.33
PIKFYVE-206ENST00000443896 A0A087WZ62 844 aa17.1■□□□□ 0.33
PIKFYVE-206ENST00000443896 ACSL3O95573 720 aa17.1■□□□□ 0.33
PIKFYVE-206ENST00000443896 GH1P01241 217 aa17.1■□□□□ 0.33
PIKFYVE-206ENST00000443896 CD19P15391 556 aa17.1■□□□□ 0.33
PIKFYVE-206ENST00000443896 PECAM1P16284 738 aaPredicted RBP17.1■□□□□ 0.33
PIKFYVE-206ENST00000443896 POLR2BP30876 1174 aaKnown RBP17.1■□□□□ 0.33
PIKFYVE-206ENST00000443896 SLCO1A2P46721 670 aa17.1■□□□□ 0.33
PIKFYVE-206ENST00000443896 VPS41P49754 854 aa17.1■□□□□ 0.33
PIKFYVE-206ENST00000443896 KAZNQ674X7 775 aa17.1■□□□□ 0.33
PIKFYVE-206ENST00000443896 TXNRD3NBQ6F5E7 133 aa17.1■□□□□ 0.33
PIKFYVE-206ENST00000443896 JADE1Q6IE81 842 aa17.1■□□□□ 0.33
PIKFYVE-206ENST00000443896 EMID1Q96A84 441 aaPredicted RBP17.1■□□□□ 0.33
PIKFYVE-206ENST00000443896 FDXACB1Q9BRP7 624 aaPredicted RBP17.1■□□□□ 0.33
PIKFYVE-206ENST00000443896 RBM47A0AV96 593 aaKnown RBP17.1■□□□□ 0.33
PIKFYVE-206ENST00000443896 RAB27AP51159 221 aa17.1■□□□□ 0.33
PIKFYVE-206ENST00000443896 CDH8P55286 799 aa17.1■□□□□ 0.33
PIKFYVE-206ENST00000443896 ZFYVE27Q5T4F4 411 aa17.1■□□□□ 0.33
PIKFYVE-206ENST00000443896 DPY19L2Q6NUT2 758 aa17.1■□□□□ 0.33
PIKFYVE-206ENST00000443896 RELL1Q8IUW5 271 aa17.1■□□□□ 0.33
PIKFYVE-206ENST00000443896 XPO6Q96QU8 1125 aaKnown RBP17.1■□□□□ 0.33
PIKFYVE-206ENST00000443896 VRTNQ9H8Y1 702 aa17.1■□□□□ 0.33
PIKFYVE-206ENST00000443896 PIDD1Q9HB75 910 aa17.1■□□□□ 0.33
PIKFYVE-206ENST00000443896 C5orf60A6NFR6 353 aa17.09■□□□□ 0.33
PIKFYVE-206ENST00000443896 SIGLEC16A6NMB1 481 aa17.09■□□□□ 0.33
PIKFYVE-206ENST00000443896 CSDE1O75534 798 aaKnown RBP17.09■□□□□ 0.33
PIKFYVE-206ENST00000443896 CHN1P15882 459 aa17.09■□□□□ 0.33
PIKFYVE-206ENST00000443896 ATF7P17544 494 aaPredicted RBP17.09■□□□□ 0.33
PIKFYVE-206ENST00000443896 CCNA1P78396 465 aa17.09■□□□□ 0.33
PIKFYVE-206ENST00000443896 IZUMO3Q5VZ72 239 aa17.09■□□□□ 0.33
PIKFYVE-206ENST00000443896 POLNQ7Z5Q5 900 aa17.09■□□□□ 0.33
PIKFYVE-206ENST00000443896 SERPINB12Q96P63 405 aa17.09■□□□□ 0.33
PIKFYVE-206ENST00000443896 ASB7Q9H672 318 aa17.09■□□□□ 0.33
PIKFYVE-206ENST00000443896 ACTR5Q9H9F9 607 aaPredicted RBP17.09■□□□□ 0.33
PIKFYVE-206ENST00000443896 DNPEPQ9ULA0 475 aa17.09■□□□□ 0.33
PIKFYVE-206ENST00000443896 C15orf41Q9Y2V0 281 aa17.09■□□□□ 0.33
PIKFYVE-206ENST00000443896 COL1A2P08123 1366 aa17.09■□□□□ 0.33
PIKFYVE-206ENST00000443896 hCG_1818297A0A087WSY0 165 aa17.09■□□□□ 0.33
PIKFYVE-206ENST00000443896 MAP3K13O43283 966 aa17.09■□□□□ 0.33
PIKFYVE-206ENST00000443896 ITGB3P05106 788 aa17.09■□□□□ 0.33
PIKFYVE-206ENST00000443896 YBX3P16989 372 aaKnown RBP eCLIP17.09■□□□□ 0.33
PIKFYVE-206ENST00000443896 ADORA2AP29274 412 aa17.09■□□□□ 0.33
PIKFYVE-206ENST00000443896 TFDP3Q5H9I0 405 aa17.09■□□□□ 0.33
PIKFYVE-206ENST00000443896 TMEM130Q8N3G9 435 aa17.09■□□□□ 0.33
PIKFYVE-206ENST00000443896 KIF2BQ8N4N8 673 aa17.09■□□□□ 0.33
PIKFYVE-206ENST00000443896 CCHCR1Q8TD31 782 aa17.09■□□□□ 0.33
PIKFYVE-206ENST00000443896 SMYD3Q9H7B4 428 aa17.09■□□□□ 0.33
PIKFYVE-206ENST00000443896 PLXNA1Q9UIW2 1896 aa17.09■□□□□ 0.33
PIKFYVE-206ENST00000443896 ATICP31939 592 aa17.09■□□□□ 0.33
PIKFYVE-206ENST00000443896 RFC1P35251 1148 aaPredicted RBP17.09■□□□□ 0.33
PIKFYVE-206ENST00000443896 CDKN2BP42772 138 aa17.09■□□□□ 0.33
PIKFYVE-206ENST00000443896 EAPPQ56P03 285 aaPredicted RBP17.09■□□□□ 0.33
PIKFYVE-206ENST00000443896 GSTA5Q7RTV2 222 aa17.09■□□□□ 0.33
PIKFYVE-206ENST00000443896 SLC4A11Q8NBS3 891 aa17.09■□□□□ 0.33
PIKFYVE-206ENST00000443896 FNIP1Q8TF40 1166 aa17.09■□□□□ 0.33
PIKFYVE-206ENST00000443896 AFG1LQ8WV93 481 aa17.09■□□□□ 0.33
PIKFYVE-206ENST00000443896 ATXN2LQ8WWM7 1075 aaKnown RBP17.09■□□□□ 0.33
PIKFYVE-206ENST00000443896 SELENOSQ9BQE4 189 aa17.09■□□□□ 0.33
PIKFYVE-206ENST00000443896 AKT3Q9Y243 479 aa17.09■□□□□ 0.33
PIKFYVE-206ENST00000443896 SMIM24O75264 130 aa17.08■□□□□ 0.33
PIKFYVE-206ENST00000443896 KRT3P12035 628 aa17.08■□□□□ 0.33
PIKFYVE-206ENST00000443896 LONRF1Q17RB8 773 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 164.7 ms