RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 ZNF132P52740 706 aa32.52■■■□□ 2.8
CSNK1E-206ENST00000413574 MAPRE1Q15691 268 aaKnown RBP32.52■■■□□ 2.8
CSNK1E-206ENST00000413574 ANKRD54Q6NXT1 300 aa32.52■■■□□ 2.8
CSNK1E-206ENST00000413574 PAQR9Q6ZVX9 377 aa32.52■■■□□ 2.8
CSNK1E-206ENST00000413574 SPPL2BQ8TCT7 592 aa32.52■■■□□ 2.8
CSNK1E-206ENST00000413574 SEPT5Q99719 369 aaPredicted RBP32.52■■■□□ 2.8
CSNK1E-206ENST00000413574 ACP6Q9NPH0 428 aa32.52■■■□□ 2.8
CSNK1E-206ENST00000413574 BDNFP23560 247 aa32.51■■■□□ 2.8
CSNK1E-206ENST00000413574 SMARCB1Q12824 385 aa32.51■■■□□ 2.8
CSNK1E-206ENST00000413574 C4orf50Q6ZRC1 276 aa32.51■■■□□ 2.8
CSNK1E-206ENST00000413574 FUKQ8N0W3 1084 aa32.51■■■□□ 2.8
CSNK1E-206ENST00000413574 SLC2A14Q8TDB8 520 aa32.51■■■□□ 2.8
CSNK1E-206ENST00000413574 C2orf15Q8WU43 125 aaKnown RBP32.51■■■□□ 2.8
CSNK1E-206ENST00000413574 ZNF518BQ9C0D4 1074 aa32.51■■■□□ 2.8
CSNK1E-206ENST00000413574 INSL5Q9Y5Q6 135 aa32.51■■■□□ 2.8
CSNK1E-206ENST00000413574 SRGAP2BP0DMP2 458 aa32.51■■■□□ 2.79
CSNK1E-206ENST00000413574 RFX1P22670 979 aa32.51■■■□□ 2.79
CSNK1E-206ENST00000413574 CLUL1Q15846 466 aa32.51■■■□□ 2.79
CSNK1E-206ENST00000413574 MGAT5BQ3V5L5 792 aa32.51■■■□□ 2.79
CSNK1E-206ENST00000413574 SYCE2Q6PIF2 218 aa32.51■■■□□ 2.79
CSNK1E-206ENST00000413574 HDAC7Q8WUI4 952 aa32.51■■■□□ 2.79
CSNK1E-206ENST00000413574 CYFIP2Q96F07 1278 aa32.51■■■□□ 2.79
CSNK1E-206ENST00000413574 MED10Q9BTT4 135 aa32.51■■■□□ 2.79
CSNK1E-206ENST00000413574 STK33Q9BYT3 514 aa32.51■■■□□ 2.79
CSNK1E-206ENST00000413574 PRDM6Q9NQX0 595 aa32.51■■■□□ 2.79
CSNK1E-206ENST00000413574 ZMYND10O75800 440 aa32.5■■■□□ 2.79
CSNK1E-206ENST00000413574 GPR15P49685 360 aa32.5■■■□□ 2.79
CSNK1E-206ENST00000413574 CFAP221Q4G0U5 840 aa32.5■■■□□ 2.79
CSNK1E-206ENST00000413574 PPP1R26Q5T8A7 1209 aaPredicted RBP32.5■■■□□ 2.79
CSNK1E-206ENST00000413574 SARM1Q6SZW1 724 aa32.5■■■□□ 2.79
CSNK1E-206ENST00000413574 GPIHBP1Q8IV16 184 aa32.5■■■□□ 2.79
CSNK1E-206ENST00000413574 UBE2ZQ9H832 354 aaPredicted RBP32.5■■■□□ 2.79
CSNK1E-206ENST00000413574 DZANK1Q9NVP4 752 aa32.5■■■□□ 2.79
CSNK1E-206ENST00000413574 DPP7Q9UHL4 492 aa32.5■■■□□ 2.79
CSNK1E-206ENST00000413574 YIPF1Q9Y548 306 aa32.5■■■□□ 2.79
CSNK1E-206ENST00000413574 DOCK6Q96HP0 2047 aa32.49■■■□□ 2.79
CSNK1E-206ENST00000413574 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP32.49■■■□□ 2.79
CSNK1E-206ENST00000413574 H3BQ06 376 aaPredicted RBP32.49■■■□□ 2.79
CSNK1E-206ENST00000413574 CBFA2T2O43439 604 aa32.49■■■□□ 2.79
CSNK1E-206ENST00000413574 HAPLN1P10915 354 aaPredicted RBP32.49■■■□□ 2.79
CSNK1E-206ENST00000413574 CD19P15391 556 aa32.49■■■□□ 2.79
CSNK1E-206ENST00000413574 ADORA2BP29275 332 aa32.49■■■□□ 2.79
CSNK1E-206ENST00000413574 CACNA2D1P54289 1103 aa32.49■■■□□ 2.79
CSNK1E-206ENST00000413574 PPM1LQ5SGD2 360 aa32.49■■■□□ 2.79
CSNK1E-206ENST00000413574 TMC5Q6UXY8 1006 aa32.49■■■□□ 2.79
CSNK1E-206ENST00000413574 CCDC149Q6ZUS6 474 aa32.49■■■□□ 2.79
CSNK1E-206ENST00000413574 TMEM30AQ9NV96 361 aa32.49■■■□□ 2.79
CSNK1E-206ENST00000413574 MAFFQ9ULX9 164 aa32.49■■■□□ 2.79
CSNK1E-206ENST00000413574 C2orf16Q68DN1 1984 aa32.49■■■□□ 2.79
CSNK1E-206ENST00000413574 CCDC195A0A1B0GUA6 201 aa32.48■■■□□ 2.79
CSNK1E-206ENST00000413574 CYP26A1O43174 497 aa32.48■■■□□ 2.79
CSNK1E-206ENST00000413574 TRIM21P19474 475 aaKnown RBP32.48■■■□□ 2.79
CSNK1E-206ENST00000413574 KCNA5P22460 613 aa32.48■■■□□ 2.79
CSNK1E-206ENST00000413574 TWF1Q12792 350 aa32.48■■■□□ 2.79
CSNK1E-206ENST00000413574 UVSSAQ2YD98 709 aa32.48■■■□□ 2.79
CSNK1E-206ENST00000413574 RARS2Q5T160 578 aaKnown RBP32.48■■■□□ 2.79
CSNK1E-206ENST00000413574 FAM35AQ86V20 835 aa32.48■■■□□ 2.79
CSNK1E-206ENST00000413574 TFAP2BQ92481 460 aa32.48■■■□□ 2.79
CSNK1E-206ENST00000413574 FUBP3Q96I24 572 aaKnown RBP eCLIP32.48■■■□□ 2.79
CSNK1E-206ENST00000413574 ZSWIM1Q9BR11 485 aa32.48■■■□□ 2.79
CSNK1E-206ENST00000413574 TRIM5Q9C035 493 aa32.48■■■□□ 2.79
CSNK1E-206ENST00000413574 ABCB6Q9NP58 842 aa32.48■■■□□ 2.79
CSNK1E-206ENST00000413574 CDH22Q9UJ99 828 aa32.48■■■□□ 2.79
CSNK1E-206ENST00000413574 F8VZ95 297 aa32.48■■■□□ 2.79
CSNK1E-206ENST00000413574 CCL16O15467 120 aa32.48■■■□□ 2.79
CSNK1E-206ENST00000413574 TPM3P06753 285 aa32.48■■■□□ 2.79
CSNK1E-206ENST00000413574 PAEPP09466 180 aa32.48■■■□□ 2.79
CSNK1E-206ENST00000413574 JAM2P57087 298 aa32.48■■■□□ 2.79
CSNK1E-206ENST00000413574 SDHAF4Q5VUM1 108 aa32.48■■■□□ 2.79
CSNK1E-206ENST00000413574 GPR152Q8TDT2 470 aa32.48■■■□□ 2.79
CSNK1E-206ENST00000413574 MSLNLQ96KJ4 702 aa32.48■■■□□ 2.79
CSNK1E-206ENST00000413574 DNAI2Q9GZS0 605 aa32.48■■■□□ 2.79
CSNK1E-206ENST00000413574 SFXN1Q9H9B4 322 aa32.48■■■□□ 2.79
CSNK1E-206ENST00000413574 BRD2P25440 801 aaKnown RBP32.47■■■□□ 2.79
CSNK1E-206ENST00000413574 DDR2Q16832 855 aa32.47■■■□□ 2.79
CSNK1E-206ENST00000413574 ELMSAN1Q6PJG2 1045 aa32.47■■■□□ 2.79
CSNK1E-206ENST00000413574 SCN4BQ8IWT1 228 aa32.47■■■□□ 2.79
CSNK1E-206ENST00000413574 FAM71AQ8IYT1 594 aa32.47■■■□□ 2.79
CSNK1E-206ENST00000413574 STKLD1Q8NE28 680 aa32.47■■■□□ 2.79
CSNK1E-206ENST00000413574 HLA-CQ95604 372 aa32.47■■■□□ 2.79
CSNK1E-206ENST00000413574 HNRNPABQ99729 332 aaKnown RBP32.47■■■□□ 2.79
CSNK1E-206ENST00000413574 CEP72Q9P209 647 aa32.47■■■□□ 2.79
CSNK1E-206ENST00000413574 HSFX1Q9UBD0 423 aa32.47■■■□□ 2.79
CSNK1E-206ENST00000413574 ATF6P18850 670 aa32.46■■■□□ 2.79
CSNK1E-206ENST00000413574 SSTR3P32745 418 aaPredicted RBP32.46■■■□□ 2.79
CSNK1E-206ENST00000413574 CLCN1P35523 988 aa32.46■■■□□ 2.79
CSNK1E-206ENST00000413574 TUFMP49411 452 aaKnown RBP32.46■■■□□ 2.79
CSNK1E-206ENST00000413574 SGO2Q562F6 1265 aa32.46■■■□□ 2.79
CSNK1E-206ENST00000413574 CACNA2D4Q7Z3S7 1137 aa32.46■■■□□ 2.79
CSNK1E-206ENST00000413574 KRT82Q9NSB4 513 aa32.46■■■□□ 2.79
CSNK1E-206ENST00000413574 LRG1P02750 347 aa32.45■■■□□ 2.79
CSNK1E-206ENST00000413574 VDRP11473 427 aa32.45■■■□□ 2.79
CSNK1E-206ENST00000413574 GRIK1P39086 918 aa32.45■■■□□ 2.79
CSNK1E-206ENST00000413574 ZNF707Q96C28 371 aaPredicted RBP32.45■■■□□ 2.79
CSNK1E-206ENST00000413574 SPAG5Q96R06 1193 aa32.45■■■□□ 2.79
CSNK1E-206ENST00000413574 TTYH3Q9C0H2 523 aa32.45■■■□□ 2.79
CSNK1E-206ENST00000413574 ZDHHC7Q9NXF8 308 aa32.45■■■□□ 2.79
CSNK1E-206ENST00000413574 MAGEA11P43364 429 aa32.44■■■□□ 2.78
CSNK1E-206ENST00000413574 ALDH1A3P47895 512 aa32.44■■■□□ 2.78
CSNK1E-206ENST00000413574 ARHGAP17Q68EM7 881 aa32.44■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms