RNA–Protein interactions for RNA: ENST00000409828.7

PAX3-208, Transcript of paired box 3, humanhuman

TSL 1 (best) BASIC

Gene PAX3, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-208ENST00000409828 SERPINC1P01008 464 aa19.29■□□□□ 0.68
PAX3-208ENST00000409828 LRG1P02750 347 aa19.29■□□□□ 0.68
PAX3-208ENST00000409828 ALDH1A3P47895 512 aa19.29■□□□□ 0.68
PAX3-208ENST00000409828 ZNF132P52740 706 aa19.29■□□□□ 0.68
PAX3-208ENST00000409828 RPL10AP62906 217 aaKnown RBP19.29■□□□□ 0.68
PAX3-208ENST00000409828 FANCCQ00597 558 aa19.29■□□□□ 0.68
PAX3-208ENST00000409828 NR1I3Q14994 352 aa19.29■□□□□ 0.68
PAX3-208ENST00000409828 MDH1BQ5I0G3 518 aa19.29■□□□□ 0.68
PAX3-208ENST00000409828 ATAT1Q5SQI0 421 aa19.29■□□□□ 0.68
PAX3-208ENST00000409828 SLC4A11Q8NBS3 891 aa19.29■□□□□ 0.68
PAX3-208ENST00000409828 SHC3Q92529 594 aa19.29■□□□□ 0.68
PAX3-208ENST00000409828 SUSD6Q92537 303 aa19.29■□□□□ 0.68
PAX3-208ENST00000409828 KAT5Q92993 513 aa19.29■□□□□ 0.68
PAX3-208ENST00000409828 ZNF707Q96C28 371 aaPredicted RBP19.29■□□□□ 0.68
PAX3-208ENST00000409828 RIPOR3Q96MK2 946 aa19.29■□□□□ 0.68
PAX3-208ENST00000409828 HNRNPABQ99729 332 aaKnown RBP19.29■□□□□ 0.68
PAX3-208ENST00000409828 NAA15Q9BXJ9 866 aaKnown RBP19.29■□□□□ 0.68
PAX3-208ENST00000409828 ABI2Q9NYB9 513 aaPredicted RBP19.29■□□□□ 0.68
PAX3-208ENST00000409828 YIPF1Q9Y548 306 aa19.29■□□□□ 0.68
PAX3-208ENST00000409828 GREB1Q4ZG55 1949 aa19.29■□□□□ 0.68
PAX3-208ENST00000409828 DOCK6Q96HP0 2047 aa19.29■□□□□ 0.68
PAX3-208ENST00000409828 XIRP2A4UGR9 3374 aa19.28■□□□□ 0.68
PAX3-208ENST00000409828 H3BQ06 376 aaPredicted RBP19.28■□□□□ 0.68
PAX3-208ENST00000409828 UCHL3P15374 230 aa19.28■□□□□ 0.68
PAX3-208ENST00000409828 MTHFRP42898 656 aa19.28■□□□□ 0.68
PAX3-208ENST00000409828 EPHB3P54753 998 aa19.28■□□□□ 0.68
PAX3-208ENST00000409828 SYCP1Q15431 976 aa19.28■□□□□ 0.68
PAX3-208ENST00000409828 ARHGAP17Q68EM7 881 aa19.28■□□□□ 0.68
PAX3-208ENST00000409828 TMEM270Q6UE05 265 aa19.28■□□□□ 0.68
PAX3-208ENST00000409828 FUKQ8N0W3 1084 aa19.28■□□□□ 0.68
PAX3-208ENST00000409828 LEMD2Q8NC56 503 aa19.28■□□□□ 0.68
PAX3-208ENST00000409828 CYFIP2Q96F07 1278 aa19.28■□□□□ 0.68
PAX3-208ENST00000409828 B3GNT5Q9BYG0 378 aa19.28■□□□□ 0.68
PAX3-208ENST00000409828 AVENQ9NQS1 362 aaPredicted RBP19.28■□□□□ 0.68
PAX3-208ENST00000409828 DNAJC12Q9UKB3 198 aa19.28■□□□□ 0.68
PAX3-208ENST00000409828 PCDHB4Q9Y5E5 795 aa19.28■□□□□ 0.68
PAX3-208ENST00000409828 DENND4AQ7Z401 1863 aa19.28■□□□□ 0.68
PAX3-208ENST00000409828 NOTCH4Q99466 2003 aa19.27■□□□□ 0.68
PAX3-208ENST00000409828 TRIM66O15016 1216 aa19.27■□□□□ 0.68
PAX3-208ENST00000409828 MBTPS2O43462 519 aa19.27■□□□□ 0.68
PAX3-208ENST00000409828 VDRP11473 427 aa19.27■□□□□ 0.68
PAX3-208ENST00000409828 UBASH3AP57075 661 aa19.27■□□□□ 0.68
PAX3-208ENST00000409828 CYP27A1Q02318 531 aa19.27■□□□□ 0.68
PAX3-208ENST00000409828 STILQ15468 1287 aa19.27■□□□□ 0.68
PAX3-208ENST00000409828 MGAT5BQ3V5L5 792 aa19.27■□□□□ 0.68
PAX3-208ENST00000409828 RARS2Q5T160 578 aaKnown RBP19.27■□□□□ 0.68
PAX3-208ENST00000409828 TMC5Q6UXY8 1006 aa19.27■□□□□ 0.68
PAX3-208ENST00000409828 PAQR9Q6ZVX9 377 aa19.27■□□□□ 0.68
PAX3-208ENST00000409828 ITIH5Q86UX2 942 aa19.27■□□□□ 0.68
PAX3-208ENST00000409828 ELMOD1Q8N336 334 aa19.27■□□□□ 0.68
PAX3-208ENST00000409828 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.27■□□□□ 0.68
PAX3-208ENST00000409828 SMARCD1Q96GM5 515 aa19.27■□□□□ 0.68
PAX3-208ENST00000409828 SPATA17Q96L03 361 aa19.27■□□□□ 0.68
PAX3-208ENST00000409828 C8orf48Q96LL4 319 aa19.27■□□□□ 0.68
PAX3-208ENST00000409828 NAP1L5Q96NT1 182 aaPredicted RBP19.27■□□□□ 0.68
PAX3-208ENST00000409828 LSM14BQ9BX40 385 aaKnown RBP19.27■□□□□ 0.68
PAX3-208ENST00000409828 STK33Q9BYT3 514 aa19.27■□□□□ 0.68
PAX3-208ENST00000409828 SLC27A5Q9Y2P5 690 aa19.27■□□□□ 0.68
PAX3-208ENST00000409828 TEX33O43247 280 aa19.26■□□□□ 0.67
PAX3-208ENST00000409828 NOL4O94818 638 aa19.26■□□□□ 0.67
PAX3-208ENST00000409828 TPM3P06753 285 aa19.26■□□□□ 0.67
PAX3-208ENST00000409828 CYP2F1P24903 491 aa19.26■□□□□ 0.67
PAX3-208ENST00000409828 EPHA5P54756 1037 aa19.26■□□□□ 0.67
PAX3-208ENST00000409828 TWF1Q12792 350 aa19.26■□□□□ 0.67
PAX3-208ENST00000409828 SMAD2Q15796 467 aaKnown RBP19.26■□□□□ 0.67
PAX3-208ENST00000409828 MEA1Q16626 185 aa19.26■□□□□ 0.67
PAX3-208ENST00000409828 ZNF394Q53GI3 561 aa19.26■□□□□ 0.67
PAX3-208ENST00000409828 IQCEQ6IPM2 695 aa19.26■□□□□ 0.67
PAX3-208ENST00000409828 GJB7Q6PEY0 223 aa19.26■□□□□ 0.67
PAX3-208ENST00000409828 C12orf76Q8N812 135 aaPredicted RBP19.26■□□□□ 0.67
PAX3-208ENST00000409828 C12orf29Q8N999 325 aa19.26■□□□□ 0.67
PAX3-208ENST00000409828 RBBP8NLQ8NC74 664 aaPredicted RBP19.26■□□□□ 0.67
PAX3-208ENST00000409828 SMG7Q92540 1137 aaKnown RBP19.26■□□□□ 0.67
PAX3-208ENST00000409828 PSMG2Q969U7 264 aa19.26■□□□□ 0.67
PAX3-208ENST00000409828 ZNF512Q96ME7 567 aaPredicted RBP19.26■□□□□ 0.67
PAX3-208ENST00000409828 HEXIM2Q96MH2 286 aaKnown RBP19.26■□□□□ 0.67
PAX3-208ENST00000409828 SEPT5Q99719 369 aaPredicted RBP19.26■□□□□ 0.67
PAX3-208ENST00000409828 GANQ9H2C0 597 aa19.26■□□□□ 0.67
PAX3-208ENST00000409828 CSNK1G1Q9HCP0 422 aa19.26■□□□□ 0.67
PAX3-208ENST00000409828 PNPLA8Q9NP80 782 aa19.26■□□□□ 0.67
PAX3-208ENST00000409828 NCOR1O75376 2440 aa19.26■□□□□ 0.67
PAX3-208ENST00000409828 ZNF638Q14966 1978 aaKnown RBP19.26■□□□□ 0.67
PAX3-208ENST00000409828 GRXCR2A6NFK2 248 aa19.25■□□□□ 0.67
PAX3-208ENST00000409828 PTPN2P17706 415 aa19.25■□□□□ 0.67
PAX3-208ENST00000409828 ATF6P18850 670 aa19.25■□□□□ 0.67
PAX3-208ENST00000409828 BDNFP23560 247 aa19.25■□□□□ 0.67
PAX3-208ENST00000409828 MRPS5P82675 430 aaKnown RBP19.25■□□□□ 0.67
PAX3-208ENST00000409828 CBX2Q14781 532 aaPredicted RBP19.25■□□□□ 0.67
PAX3-208ENST00000409828 VEPH1Q14D04 833 aa19.25■□□□□ 0.67
PAX3-208ENST00000409828 CCDC142Q17RM4 750 aa19.25■□□□□ 0.67
PAX3-208ENST00000409828 SGO2Q562F6 1265 aa19.25■□□□□ 0.67
PAX3-208ENST00000409828 FAM35AQ86V20 835 aa19.25■□□□□ 0.67
PAX3-208ENST00000409828 FAM71AQ8IYT1 594 aa19.25■□□□□ 0.67
PAX3-208ENST00000409828 TTC9BQ8N6N2 239 aa19.25■□□□□ 0.67
PAX3-208ENST00000409828 RNF214Q8ND24 703 aa19.25■□□□□ 0.67
PAX3-208ENST00000409828 NEK11Q8NG66 645 aa19.25■□□□□ 0.67
PAX3-208ENST00000409828 SLC2A14Q8TDB8 520 aa19.25■□□□□ 0.67
PAX3-208ENST00000409828 IQCDQ96DY2 449 aa19.25■□□□□ 0.67
PAX3-208ENST00000409828 EDEM3Q9BZQ6 932 aa19.25■□□□□ 0.67
PAX3-208ENST00000409828 ZNF518BQ9C0D4 1074 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms