RNA–Protein interactions for RNA: ENST00000396914.3

CHCHD4-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD4, Length 1,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-202ENST00000396914 FUBP3Q96I24 572 aaKnown RBP eCLIP31.28■■■□□ 2.6
CHCHD4-202ENST00000396914 TWNKQ96RR1 684 aa31.28■■■□□ 2.6
CHCHD4-202ENST00000396914 TCF20Q9UGU0 1960 aaKnown RBP31.28■■■□□ 2.6
CHCHD4-202ENST00000396914 GTPBP10A4D1E9 387 aaKnown RBP31.27■■■□□ 2.6
CHCHD4-202ENST00000396914 CFAP221Q4G0U5 840 aa31.27■■■□□ 2.6
CHCHD4-202ENST00000396914 TRIM65Q6PJ69 517 aa31.27■■■□□ 2.6
CHCHD4-202ENST00000396914 GPR152Q8TDT2 470 aa31.27■■■□□ 2.6
CHCHD4-202ENST00000396914 RPGRIP1Q96KN7 1286 aa31.27■■■□□ 2.6
CHCHD4-202ENST00000396914 PHF7Q9BWX1 381 aaPredicted RBP31.27■■■□□ 2.6
CHCHD4-202ENST00000396914 WDR6Q9NNW5 1121 aaKnown RBP31.27■■■□□ 2.6
CHCHD4-202ENST00000396914 UBE2TQ9NPD8 197 aaPredicted RBP31.27■■■□□ 2.6
CHCHD4-202ENST00000396914 FAM49BQ9NUQ9 324 aa31.27■■■□□ 2.6
CHCHD4-202ENST00000396914 CEP72Q9P209 647 aa31.27■■■□□ 2.6
CHCHD4-202ENST00000396914 DNMT3BQ9UBC3 853 aaKnown RBP31.27■■■□□ 2.6
CHCHD4-202ENST00000396914 ATP8B3O60423 1300 aa31.27■■■□□ 2.6
CHCHD4-202ENST00000396914 CLUHO75153 1309 aa31.27■■■□□ 2.6
CHCHD4-202ENST00000396914 POU2F2P09086 479 aa31.26■■■□□ 2.6
CHCHD4-202ENST00000396914 GRIK1P39086 918 aa31.26■■■□□ 2.6
CHCHD4-202ENST00000396914 RPL10AP62906 217 aaKnown RBP31.26■■■□□ 2.6
CHCHD4-202ENST00000396914 TPM4P67936 248 aa31.26■■■□□ 2.6
CHCHD4-202ENST00000396914 PABPC1LQ4VXU2 614 aaKnown RBP31.26■■■□□ 2.6
CHCHD4-202ENST00000396914 CRYBG2Q8N1P7 616 aa31.26■■■□□ 2.6
CHCHD4-202ENST00000396914 HEXIM2Q96MH2 286 aaKnown RBP31.26■■■□□ 2.6
CHCHD4-202ENST00000396914 B3GNT5Q9BYG0 378 aa31.26■■■□□ 2.6
CHCHD4-202ENST00000396914 ELOVL4Q9GZR5 314 aa31.26■■■□□ 2.6
CHCHD4-202ENST00000396914 CBX8Q9HC52 389 aa31.26■■■□□ 2.6
CHCHD4-202ENST00000396914 CLDN5O00501 218 aa31.25■■■□□ 2.59
CHCHD4-202ENST00000396914 GPR15P49685 360 aa31.25■■■□□ 2.59
CHCHD4-202ENST00000396914 DDR2Q16832 855 aa31.25■■■□□ 2.59
CHCHD4-202ENST00000396914 FKBP15Q5T1M5 1219 aa31.25■■■□□ 2.59
CHCHD4-202ENST00000396914 SDHAF4Q5VUM1 108 aa31.25■■■□□ 2.59
CHCHD4-202ENST00000396914 ITIH5Q86UX2 942 aa31.25■■■□□ 2.59
CHCHD4-202ENST00000396914 C12orf29Q8N999 325 aa31.25■■■□□ 2.59
CHCHD4-202ENST00000396914 ADAMTS19Q8TE59 1207 aa31.25■■■□□ 2.59
CHCHD4-202ENST00000396914 WHAMMQ8TF30 809 aa31.25■■■□□ 2.59
CHCHD4-202ENST00000396914 KAT5Q92993 513 aa31.25■■■□□ 2.59
CHCHD4-202ENST00000396914 LIMA1Q9UHB6 759 aaKnown RBP31.25■■■□□ 2.59
CHCHD4-202ENST00000396914 PCDHB4Q9Y5E5 795 aa31.25■■■□□ 2.59
CHCHD4-202ENST00000396914 PAPLNO95428 1278 aa31.24■■■□□ 2.59
CHCHD4-202ENST00000396914 CAVIN2O95810 425 aa31.24■■■□□ 2.59
CHCHD4-202ENST00000396914 CCDC130P13994 396 aa31.24■■■□□ 2.59
CHCHD4-202ENST00000396914 ZNF18P17022 549 aa31.24■■■□□ 2.59
CHCHD4-202ENST00000396914 ATF6P18850 670 aa31.24■■■□□ 2.59
CHCHD4-202ENST00000396914 FSHRP23945 695 aa31.24■■■□□ 2.59
CHCHD4-202ENST00000396914 PON1P27169 355 aa31.24■■■□□ 2.59
CHCHD4-202ENST00000396914 ANXA13P27216 316 aa31.24■■■□□ 2.59
CHCHD4-202ENST00000396914 COPB1P53618 953 aaKnown RBP31.24■■■□□ 2.59
CHCHD4-202ENST00000396914 PHLDB3Q6NSJ2 640 aa31.24■■■□□ 2.59
CHCHD4-202ENST00000396914 GET4Q7L5D6 327 aaPredicted RBP31.24■■■□□ 2.59
CHCHD4-202ENST00000396914 TMEM176AQ96HP8 235 aa31.24■■■□□ 2.59
CHCHD4-202ENST00000396914 ZNF518BQ9C0D4 1074 aa31.24■■■□□ 2.59
CHCHD4-202ENST00000396914 FAM124BQ9H5Z6 455 aaPredicted RBP31.24■■■□□ 2.59
CHCHD4-202ENST00000396914 ASAH2Q9NR71 780 aa31.24■■■□□ 2.59
CHCHD4-202ENST00000396914 ASB3Q9Y575 518 aa31.24■■■□□ 2.59
CHCHD4-202ENST00000396914 RHOP08100 348 aa31.24■■■□□ 2.59
CHCHD4-202ENST00000396914 MYL4P12829 197 aa31.24■■■□□ 2.59
CHCHD4-202ENST00000396914 ATP1A3P13637 1013 aa31.24■■■□□ 2.59
CHCHD4-202ENST00000396914 ADORA2BP29275 332 aa31.24■■■□□ 2.59
CHCHD4-202ENST00000396914 MAGEA11P43364 429 aa31.24■■■□□ 2.59
CHCHD4-202ENST00000396914 IQCB1Q15051 598 aa31.24■■■□□ 2.59
CHCHD4-202ENST00000396914 CYP4A22Q5TCH4 519 aa31.24■■■□□ 2.59
CHCHD4-202ENST00000396914 LUZP1Q86V48 1076 aa31.24■■■□□ 2.59
CHCHD4-202ENST00000396914 HS6ST3Q8IZP7 471 aa31.24■■■□□ 2.59
CHCHD4-202ENST00000396914 HSD3B7Q9H2F3 369 aa31.24■■■□□ 2.59
CHCHD4-202ENST00000396914 PRKAG3Q9UGI9 489 aa31.24■■■□□ 2.59
CHCHD4-202ENST00000396914 NR2E1Q9Y466 385 aa31.24■■■□□ 2.59
CHCHD4-202ENST00000396914 C5orf42Q9H799 3197 aa31.23■■■□□ 2.59
CHCHD4-202ENST00000396914 GOLGA6L19H0YKK7 550 aa31.23■■■□□ 2.59
CHCHD4-202ENST00000396914 MFAP3P55082 362 aa31.23■■■□□ 2.59
CHCHD4-202ENST00000396914 APBA1Q02410 837 aa31.23■■■□□ 2.59
CHCHD4-202ENST00000396914 GCNT1Q02742 428 aa31.23■■■□□ 2.59
CHCHD4-202ENST00000396914 GJB7Q6PEY0 223 aa31.23■■■□□ 2.59
CHCHD4-202ENST00000396914 TMEM270Q6UE05 265 aa31.23■■■□□ 2.59
CHCHD4-202ENST00000396914 VSTM1Q6UX27 236 aa31.23■■■□□ 2.59
CHCHD4-202ENST00000396914 PDZD4Q76G19 769 aaPredicted RBP31.23■■■□□ 2.59
CHCHD4-202ENST00000396914 ADHFE1Q8IWW8 467 aa31.23■■■□□ 2.59
CHCHD4-202ENST00000396914 SLC2A14Q8TDB8 520 aa31.23■■■□□ 2.59
CHCHD4-202ENST00000396914 NECAB3Q96P71 396 aaPredicted RBP31.23■■■□□ 2.59
CHCHD4-202ENST00000396914 TSPY26PQ9H489 355 aa31.23■■■□□ 2.59
CHCHD4-202ENST00000396914 APEX2Q9UBZ4 518 aa31.23■■■□□ 2.59
CHCHD4-202ENST00000396914 GBP2P32456 591 aaPredicted RBP31.22■■■□□ 2.59
CHCHD4-202ENST00000396914 SSTR3P32745 418 aaPredicted RBP31.22■■■□□ 2.59
CHCHD4-202ENST00000396914 RAD23BP54727 409 aa31.22■■■□□ 2.59
CHCHD4-202ENST00000396914 DNAJB7Q7Z6W7 309 aaPredicted RBP31.22■■■□□ 2.59
CHCHD4-202ENST00000396914 FAM35AQ86V20 835 aa31.22■■■□□ 2.59
CHCHD4-202ENST00000396914 STKLD1Q8NE28 680 aa31.22■■■□□ 2.59
CHCHD4-202ENST00000396914 PSMG2Q969U7 264 aa31.22■■■□□ 2.59
CHCHD4-202ENST00000396914 CYFIP2Q96F07 1278 aa31.22■■■□□ 2.59
CHCHD4-202ENST00000396914 MAGED2Q9UNF1 606 aaPredicted RBP31.22■■■□□ 2.59
CHCHD4-202ENST00000396914 MRPS23Q9Y3D9 190 aaKnown RBP31.22■■■□□ 2.59
CHCHD4-202ENST00000396914 TRIM66O15016 1216 aa31.21■■■□□ 2.59
CHCHD4-202ENST00000396914 KRT5P13647 590 aa31.21■■■□□ 2.59
CHCHD4-202ENST00000396914 ARHGAP44Q17R89 818 aa31.21■■■□□ 2.59
CHCHD4-202ENST00000396914 LRSAM1Q6UWE0 723 aa31.21■■■□□ 2.59
CHCHD4-202ENST00000396914 SLC4A11Q8NBS3 891 aa31.21■■■□□ 2.59
CHCHD4-202ENST00000396914 SMARCD1Q96GM5 515 aa31.21■■■□□ 2.59
CHCHD4-202ENST00000396914 FAM81BQ96LP2 452 aa31.21■■■□□ 2.59
CHCHD4-202ENST00000396914 PCMTD1Q96MG8 357 aaPredicted RBP31.21■■■□□ 2.59
CHCHD4-202ENST00000396914 KRT82Q9NSB4 513 aa31.21■■■□□ 2.59
CHCHD4-202ENST00000396914 CD19P15391 556 aa31.2■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms