RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 TIGD7Q6NT04 549 aaPredicted RBP5.46□□□□□ -1.54
GABPB1-204ENST00000396464 NFRKBQ6P4R8 1299 aa5.46□□□□□ -1.54
GABPB1-204ENST00000396464 BBS12Q6ZW61 710 aa5.46□□□□□ -1.54
GABPB1-204ENST00000396464 SZRD1Q7Z422 152 aa5.46□□□□□ -1.54
GABPB1-204ENST00000396464 KCNG4Q8TDN1 519 aa5.46□□□□□ -1.54
GABPB1-204ENST00000396464 CPA5Q8WXQ8 436 aa5.46□□□□□ -1.54
GABPB1-204ENST00000396464 EID2BQ96D98 161 aa5.46□□□□□ -1.54
GABPB1-204ENST00000396464 NEIL1Q96FI4 390 aaPredicted RBP5.46□□□□□ -1.54
GABPB1-204ENST00000396464 TWNKQ96RR1 684 aa5.46□□□□□ -1.54
GABPB1-204ENST00000396464 PIGSQ96S52 555 aa5.46□□□□□ -1.54
GABPB1-204ENST00000396464 SLX1AQ9BQ83 275 aa5.46□□□□□ -1.54
GABPB1-204ENST00000396464 ITPAQ9BY32 194 aa5.46□□□□□ -1.54
GABPB1-204ENST00000396464 SEPSECSQ9HD40 501 aaKnown RBP5.46□□□□□ -1.54
GABPB1-204ENST00000396464 SERHLQ9NQF3 203 aa5.46□□□□□ -1.54
GABPB1-204ENST00000396464 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.46□□□□□ -1.547e-7■■□□□ 14.1
GABPB1-204ENST00000396464 HPF1Q9NWY4 346 aa5.46□□□□□ -1.54
GABPB1-204ENST00000396464 COMMD8Q9NX08 183 aa5.46□□□□□ -1.54
GABPB1-204ENST00000396464 SMPD4Q9NXE4 827 aa5.46□□□□□ -1.54
GABPB1-204ENST00000396464 GULP1Q9UBP9 304 aa5.46□□□□□ -1.54
GABPB1-204ENST00000396464 CPA4Q9UI42 421 aa5.46□□□□□ -1.54
GABPB1-204ENST00000396464 TMEM5Q9Y2B1 443 aa5.46□□□□□ -1.54
GABPB1-204ENST00000396464 KIAA0355O15063 1070 aa5.45□□□□□ -1.54
GABPB1-204ENST00000396464 NPHS1O60500 1241 aa5.45□□□□□ -1.54
GABPB1-204ENST00000396464 SRGAP2O75044 1071 aa5.45□□□□□ -1.54
GABPB1-204ENST00000396464 BEST1O76090 585 aa5.45□□□□□ -1.54
GABPB1-204ENST00000396464 ANXA2P07355 339 aaKnown RBP5.45□□□□□ -1.54
GABPB1-204ENST00000396464 ITGA2BP08514 1039 aa5.45□□□□□ -1.54
GABPB1-204ENST00000396464 CSH1P0DML2 217 aa5.45□□□□□ -1.54
GABPB1-204ENST00000396464 CSH2P0DML3 217 aa5.45□□□□□ -1.54
GABPB1-204ENST00000396464 HDCP19113 662 aa5.45□□□□□ -1.54
GABPB1-204ENST00000396464 EN2P19622 333 aaPredicted RBP5.45□□□□□ -1.54
GABPB1-204ENST00000396464 RXRAP19793 462 aa5.45□□□□□ -1.54
GABPB1-204ENST00000396464 NNMTP40261 264 aa5.45□□□□□ -1.54
GABPB1-204ENST00000396464 DPP6P42658 865 aa5.45□□□□□ -1.54
GABPB1-204ENST00000396464 LIMK1P53667 647 aa5.45□□□□□ -1.54
GABPB1-204ENST00000396464 RCAN1P53805 252 aa5.45□□□□□ -1.54
GABPB1-204ENST00000396464 RBP5P82980 135 aa5.45□□□□□ -1.54
GABPB1-204ENST00000396464 CHAF1BQ13112 559 aa5.45□□□□□ -1.54
GABPB1-204ENST00000396464 ADAM9Q13443 819 aa5.45□□□□□ -1.54
GABPB1-204ENST00000396464 SEMA3AQ14563 771 aa5.45□□□□□ -1.54
GABPB1-204ENST00000396464 MYBPC3Q14896 1274 aa5.45□□□□□ -1.54
GABPB1-204ENST00000396464 TMEM132BQ14DG7 1078 aa5.45□□□□□ -1.54
GABPB1-204ENST00000396464 ODF2Q5BJF6 829 aa5.45□□□□□ -1.54
GABPB1-204ENST00000396464 CATSPERGQ6ZRH7 1159 aa5.45□□□□□ -1.54
GABPB1-204ENST00000396464 MIGA2Q7L4E1 593 aa5.45□□□□□ -1.54
GABPB1-204ENST00000396464 NUP54Q7Z3B4 507 aa5.45□□□□□ -1.54
GABPB1-204ENST00000396464 TTC7BQ86TV6 843 aa5.45□□□□□ -1.54
GABPB1-204ENST00000396464 SLC9B2Q86UD5 537 aa5.45□□□□□ -1.54
GABPB1-204ENST00000396464 FAM124AQ86V42 546 aa5.45□□□□□ -1.54
GABPB1-204ENST00000396464 CPNE8Q86YQ8 564 aa5.45□□□□□ -1.54
GABPB1-204ENST00000396464 SRBD1Q8N5C6 995 aaKnown RBP5.45□□□□□ -1.54
GABPB1-204ENST00000396464 TRIML1Q8N9V2 468 aa5.45□□□□□ -1.54
GABPB1-204ENST00000396464 GLIS1Q8NBF1 620 aa5.45□□□□□ -1.54
GABPB1-204ENST00000396464 OR1N1Q8NGS0 311 aa5.45□□□□□ -1.54
GABPB1-204ENST00000396464 MOSPD2Q8NHP6 518 aa5.45□□□□□ -1.54
GABPB1-204ENST00000396464 UTP15Q8TED0 518 aaKnown RBP5.45□□□□□ -1.54
GABPB1-204ENST00000396464 TBC1D22AQ8WUA7 517 aa5.45□□□□□ -1.54
GABPB1-204ENST00000396464 RNF125Q96EQ8 232 aa5.45□□□□□ -1.54
GABPB1-204ENST00000396464 CHAMP1Q96JM3 812 aa5.45□□□□□ -1.54
GABPB1-204ENST00000396464 SNX22Q96L94 193 aa5.45□□□□□ -1.54
GABPB1-204ENST00000396464 FNBP1Q96RU3 617 aa5.45□□□□□ -1.54
GABPB1-204ENST00000396464 JAM3Q9BX67 310 aa5.45□□□□□ -1.54
GABPB1-204ENST00000396464 EIF2AQ9BY44 585 aaKnown RBP5.45□□□□□ -1.54
GABPB1-204ENST00000396464 SYNCQ9H7C4 482 aa5.45□□□□□ -1.54
GABPB1-204ENST00000396464 PCDH18Q9HCL0 1135 aa5.45□□□□□ -1.54
GABPB1-204ENST00000396464 SACM1LQ9NTJ5 587 aa5.45□□□□□ -1.54
GABPB1-204ENST00000396464 RABL2AQ9UBK7 228 aaPredicted RBP5.45□□□□□ -1.54
GABPB1-204ENST00000396464 TMPRSS11EQ9UL52 423 aa5.45□□□□□ -1.54
GABPB1-204ENST00000396464 TBX20Q9UMR3 447 aa5.45□□□□□ -1.54
GABPB1-204ENST00000396464 PCDHA13Q9Y5I0 950 aa5.45□□□□□ -1.54
GABPB1-204ENST00000396464 CCDC69A6NI79 296 aa5.44□□□□□ -1.54
GABPB1-204ENST00000396464 GOLGA6L22H0YM25 854 aa5.44□□□□□ -1.54
GABPB1-204ENST00000396464 H3BNC9 293 aa5.44□□□□□ -1.54
GABPB1-204ENST00000396464 PLOD2O00469 737 aa5.44□□□□□ -1.54
GABPB1-204ENST00000396464 FYB1O15117 783 aa5.44□□□□□ -1.54
GABPB1-204ENST00000396464 IPO8O15397 1037 aaKnown RBP5.44□□□□□ -1.54
GABPB1-204ENST00000396464 GUCA1CO95843 209 aa5.44□□□□□ -1.54
GABPB1-204ENST00000396464 PLATP00750 562 aa5.44□□□□□ -1.54
GABPB1-204ENST00000396464 TK1P04183 234 aa5.44□□□□□ -1.54
GABPB1-204ENST00000396464 GNAT1P11488 350 aa5.44□□□□□ -1.54
GABPB1-204ENST00000396464 TGM1P22735 817 aa5.44□□□□□ -1.54
GABPB1-204ENST00000396464 ADSLP30566 484 aaPredicted RBP5.44□□□□□ -1.54
GABPB1-204ENST00000396464 TNNT2P45379 298 aaPredicted RBP5.44□□□□□ -1.54
GABPB1-204ENST00000396464 ACTR2P61160 394 aa5.44□□□□□ -1.54
GABPB1-204ENST00000396464 IL1RL1Q01638 556 aa5.44□□□□□ -1.54
GABPB1-204ENST00000396464 TFCP2Q12800 502 aa5.44□□□□□ -1.54
GABPB1-204ENST00000396464 SMAD4Q13485 552 aaKnown RBP5.44□□□□□ -1.54
GABPB1-204ENST00000396464 TNIP1Q15025 636 aa5.44□□□□□ -1.54
GABPB1-204ENST00000396464 ADRM1Q16186 407 aa5.44□□□□□ -1.54
GABPB1-204ENST00000396464 ZNF674Q2M3X9 581 aa5.44□□□□□ -1.54
GABPB1-204ENST00000396464 FLYWCH1Q4VC44 716 aa5.44□□□□□ -1.54
GABPB1-204ENST00000396464 FIGNQ5HY92 759 aa5.44□□□□□ -1.54
GABPB1-204ENST00000396464 RAB12Q6IQ22 244 aa5.44□□□□□ -1.54
GABPB1-204ENST00000396464 HEATR3Q7Z4Q2 680 aa5.44□□□□□ -1.54
GABPB1-204ENST00000396464 PXKQ7Z7A4 578 aa5.44□□□□□ -1.54
GABPB1-204ENST00000396464 SLFN11Q7Z7L1 901 aa5.44□□□□□ -1.54
GABPB1-204ENST00000396464 LYSMD2Q8IV50 215 aa5.44□□□□□ -1.54
GABPB1-204ENST00000396464 SLC44A2Q8IWA5 706 aaPredicted RBP5.44□□□□□ -1.54
GABPB1-204ENST00000396464 ZFPM1Q8IX07 1006 aa5.44□□□□□ -1.54
GABPB1-204ENST00000396464 LRRC71Q8N4P6 559 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms