RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 RBM41Q96IZ5 413 aaKnown RBP16.21■□□□□ 0.19
CPSF7-202ENST00000394888 MLXIPLQ9NP71 852 aa16.21■□□□□ 0.19
CPSF7-202ENST00000394888 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.21■□□□□ 0.19
CPSF7-202ENST00000394888 E7ESA3 106 aa16.21■□□□□ 0.19
CPSF7-202ENST00000394888 MICAL2O94851 1124 aa16.21■□□□□ 0.19
CPSF7-202ENST00000394888 TMEM63AO94886 807 aa16.21■□□□□ 0.19
CPSF7-202ENST00000394888 IFNAR2P48551 515 aa16.21■□□□□ 0.19
CPSF7-202ENST00000394888 POU5F1BQ06416 359 aa16.21■□□□□ 0.19
CPSF7-202ENST00000394888 EFTUD2Q15029 972 aaKnown RBP eCLIP16.21■□□□□ 0.192e-7■■■■■ 31.2
CPSF7-202ENST00000394888 SCLT1Q96NL6 688 aa16.21■□□□□ 0.19
CPSF7-202ENST00000394888 DOCK3Q8IZD9 2030 aa16.21■□□□□ 0.19
CPSF7-202ENST00000394888 KAT6AQ92794 2004 aa16.21■□□□□ 0.19
CPSF7-202ENST00000394888 CCT8L1PA6NM43 557 aa16.21■□□□□ 0.18
CPSF7-202ENST00000394888 ALOX15BO15296 676 aa16.21■□□□□ 0.18
CPSF7-202ENST00000394888 ARF4P18085 180 aaPredicted RBP16.21■□□□□ 0.18
CPSF7-202ENST00000394888 KDELR1P24390 212 aa16.21■□□□□ 0.18
CPSF7-202ENST00000394888 CACNA2D3Q8IZS8 1091 aa16.21■□□□□ 0.18
CPSF7-202ENST00000394888 C2orf40Q9H1Z8 148 aa16.21■□□□□ 0.18
CPSF7-202ENST00000394888 SLC40A1Q9NP59 571 aa16.21■□□□□ 0.18
CPSF7-202ENST00000394888 TYROBPO43914 113 aa16.2■□□□□ 0.18
CPSF7-202ENST00000394888 STAG3L1P0CL83 205 aa16.2■□□□□ 0.18
CPSF7-202ENST00000394888 PPP1R2P3Q6NXS1 205 aa16.2■□□□□ 0.18
CPSF7-202ENST00000394888 IGDCC3Q8IVU1 814 aa16.2■□□□□ 0.18
CPSF7-202ENST00000394888 EFCC1Q9HA90 598 aa16.2■□□□□ 0.18
CPSF7-202ENST00000394888 EFR3BQ9Y2G0 817 aa16.2■□□□□ 0.18
CPSF7-202ENST00000394888 ASMTLO95671 621 aa16.2■□□□□ 0.18
CPSF7-202ENST00000394888 HOXD8P13378 290 aaPredicted RBP16.2■□□□□ 0.18
CPSF7-202ENST00000394888 TAC1P20366 129 aa16.2■□□□□ 0.18
CPSF7-202ENST00000394888 HIC1Q14526 733 aa16.2■□□□□ 0.18
CPSF7-202ENST00000394888 GKAP1Q5VSY0 366 aaPredicted RBP16.2■□□□□ 0.18
CPSF7-202ENST00000394888 BBS12Q6ZW61 710 aa16.2■□□□□ 0.18
CPSF7-202ENST00000394888 UNC45BQ8IWX7 931 aa16.2■□□□□ 0.18
CPSF7-202ENST00000394888 OPTNQ96CV9 577 aa16.2■□□□□ 0.18
CPSF7-202ENST00000394888 FAXDC2Q96IV6 333 aa16.2■□□□□ 0.18
CPSF7-202ENST00000394888 MMP19Q99542 508 aa16.2■□□□□ 0.18
CPSF7-202ENST00000394888 METTL5Q9NRN9 209 aaKnown RBP16.2■□□□□ 0.18
CPSF7-202ENST00000394888 A0A087WZ62 844 aa16.2■□□□□ 0.18
CPSF7-202ENST00000394888 ITGB3P05106 788 aa16.2■□□□□ 0.18
CPSF7-202ENST00000394888 LGALS2P05162 132 aa16.2■□□□□ 0.18
CPSF7-202ENST00000394888 INSRRP14616 1297 aa16.2■□□□□ 0.18
CPSF7-202ENST00000394888 SF3A3Q12874 501 aaKnown RBP eCLIP16.2■□□□□ 0.185e-6■■■□□ 15
CPSF7-202ENST00000394888 SH2D5Q6ZV89 423 aa16.2■□□□□ 0.18
CPSF7-202ENST00000394888 ERICH1Q86X53 443 aa16.2■□□□□ 0.18
CPSF7-202ENST00000394888 EMID1Q96A84 441 aaPredicted RBP16.2■□□□□ 0.18
CPSF7-202ENST00000394888 FDXACB1Q9BRP7 624 aaPredicted RBP16.2■□□□□ 0.18
CPSF7-202ENST00000394888 RABGEF1Q9UJ41 708 aa16.2■□□□□ 0.18
CPSF7-202ENST00000394888 DNAJC8O75937 253 aaPredicted RBP16.19■□□□□ 0.18
CPSF7-202ENST00000394888 SLC26A2P50443 739 aa16.19■□□□□ 0.18
CPSF7-202ENST00000394888 HP1BP3Q5SSJ5 553 aaPredicted RBP16.19■□□□□ 0.18
CPSF7-202ENST00000394888 C7orf31Q8N865 590 aa16.19■□□□□ 0.18
CPSF7-202ENST00000394888 RMDN2Q96LZ7 410 aa16.19■□□□□ 0.18
CPSF7-202ENST00000394888 PCDH9Q9HC56 1237 aa16.19■□□□□ 0.18
CPSF7-202ENST00000394888 FGFR1OP2Q9NVK5 253 aa16.19■□□□□ 0.18
CPSF7-202ENST00000394888 ACTL7BQ9Y614 415 aa16.19■□□□□ 0.18
CPSF7-202ENST00000394888 PPEF2O14830 753 aa16.19■□□□□ 0.18
CPSF7-202ENST00000394888 TSPAN1O60635 241 aa16.19■□□□□ 0.18
CPSF7-202ENST00000394888 TJP3O95049 919 aa16.19■□□□□ 0.18
CPSF7-202ENST00000394888 TXNP10599 105 aaKnown RBP16.19■□□□□ 0.18
CPSF7-202ENST00000394888 ATF7P17544 494 aaPredicted RBP16.19■□□□□ 0.18
CPSF7-202ENST00000394888 OTUD4Q01804 1114 aaKnown RBP16.19■□□□□ 0.18
CPSF7-202ENST00000394888 MORF4L2Q15014 288 aa16.19■□□□□ 0.18
CPSF7-202ENST00000394888 ARMCX2Q7L311 632 aa16.19■□□□□ 0.18
CPSF7-202ENST00000394888 FUKQ8N0W3 1084 aa16.19■□□□□ 0.18
CPSF7-202ENST00000394888 ACTL9Q8TC94 416 aa16.19■□□□□ 0.18
CPSF7-202ENST00000394888 SPOCK2Q92563 424 aa16.19■□□□□ 0.18
CPSF7-202ENST00000394888 ZMAT2Q96NC0 199 aaKnown RBP16.19■□□□□ 0.18
CPSF7-202ENST00000394888 SMARCAD1Q9H4L7 1026 aa16.19■□□□□ 0.18
CPSF7-202ENST00000394888 NXF1Q9UBU9 619 aaKnown RBP16.19■□□□□ 0.18
CPSF7-202ENST00000394888 TPX2Q9ULW0 747 aaKnown RBP16.19■□□□□ 0.18
CPSF7-202ENST00000394888 TCP11X1B4DZS4 312 aa16.18■□□□□ 0.18
CPSF7-202ENST00000394888 HBP1O60381 514 aa16.18■□□□□ 0.18
CPSF7-202ENST00000394888 CYP2C8P10632 490 aa16.18■□□□□ 0.18
CPSF7-202ENST00000394888 TAP1Q03518 808 aa16.18■□□□□ 0.18
CPSF7-202ENST00000394888 LDLRAD1Q5T700 205 aa16.18■□□□□ 0.18
CPSF7-202ENST00000394888 CROCCP2Q86T23 111 aa16.18■□□□□ 0.18
CPSF7-202ENST00000394888 DHX37Q8IY37 1157 aaKnown RBP16.18■□□□□ 0.18
CPSF7-202ENST00000394888 ELAC2Q9BQ52 826 aaKnown RBP16.18■□□□□ 0.18
CPSF7-202ENST00000394888 C11orf84Q9BUA3 381 aaPredicted RBP16.18■□□□□ 0.18
CPSF7-202ENST00000394888 TBK1Q9UHD2 729 aa16.18■□□□□ 0.18
CPSF7-202ENST00000394888 CSADQ9Y600 493 aa16.18■□□□□ 0.18
CPSF7-202ENST00000394888 PIAS1O75925 651 aa16.18■□□□□ 0.18
CPSF7-202ENST00000394888 SNAI1O95863 264 aaPredicted RBP16.18■□□□□ 0.18
CPSF7-202ENST00000394888 TRUB2O95900 331 aaKnown RBP16.18■□□□□ 0.18
CPSF7-202ENST00000394888 RPL22P35268 128 aaKnown RBP16.18■□□□□ 0.18
CPSF7-202ENST00000394888 PTPN11Q06124 597 aaPredicted RBP16.18■□□□□ 0.18
CPSF7-202ENST00000394888 GPS1Q13098 491 aa16.18■□□□□ 0.18
CPSF7-202ENST00000394888 MMRN1Q13201 1228 aa16.18■□□□□ 0.18
CPSF7-202ENST00000394888 ZBTB8OSQ8IWT0 167 aa16.18■□□□□ 0.18
CPSF7-202ENST00000394888 CABS1Q96KC9 395 aa16.18■□□□□ 0.18
CPSF7-202ENST00000394888 HAUS2Q9NVX0 235 aa16.18■□□□□ 0.18
CPSF7-202ENST00000394888 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.18■□□□□ 0.18
CPSF7-202ENST00000394888 MAGEB2O15479 319 aa16.18■□□□□ 0.18
CPSF7-202ENST00000394888 VTNP04004 478 aa16.18■□□□□ 0.18
CPSF7-202ENST00000394888 ZNF286BP0CG31 522 aa16.18■□□□□ 0.18
CPSF7-202ENST00000394888 YBX3P16989 372 aaKnown RBP eCLIP16.18■□□□□ 0.187e-7■□□□□ 11.1
CPSF7-202ENST00000394888 MIPP30301 263 aa16.18■□□□□ 0.18
CPSF7-202ENST00000394888 YWHAEP62258 255 aaKnown RBP16.18■□□□□ 0.18
CPSF7-202ENST00000394888 IRX3P78415 501 aaPredicted RBP16.18■□□□□ 0.18
CPSF7-202ENST00000394888 PKN2Q16513 984 aaKnown RBP16.18■□□□□ 0.18
CPSF7-202ENST00000394888 CYLDQ9NQC7 956 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms