RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 PLCB3Q01970 1234 aa11.6□□□□□ -0.55
BRCC3-204ENST00000369462 SLC39A12Q504Y0 691 aa11.6□□□□□ -0.55
BRCC3-204ENST00000369462 FAM171BQ6P995 826 aa11.6□□□□□ -0.55
BRCC3-204ENST00000369462 TRIM72Q6ZMU5 477 aa11.6□□□□□ -0.55
BRCC3-204ENST00000369462 C17orf53Q8N3J3 647 aaPredicted RBP11.6□□□□□ -0.55
BRCC3-204ENST00000369462 TMEM35BQ8NCS4 154 aa11.6□□□□□ -0.55
BRCC3-204ENST00000369462 MED10Q9BTT4 135 aa11.6□□□□□ -0.55
BRCC3-204ENST00000369462 ALG13Q9NP73 1137 aaKnown RBP11.6□□□□□ -0.55
BRCC3-204ENST00000369462 TMLHEQ9NVH6 421 aa11.6□□□□□ -0.55
BRCC3-204ENST00000369462 PPP2R2CQ9Y2T4 447 aa11.6□□□□□ -0.55
BRCC3-204ENST00000369462 YBX2Q9Y2T7 364 aaKnown RBP11.6□□□□□ -0.55
BRCC3-204ENST00000369462 PCDHA13Q9Y5I0 950 aa11.6□□□□□ -0.55
BRCC3-204ENST00000369462 H7C4K7 107 aa11.6□□□□□ -0.55
BRCC3-204ENST00000369462 RPL17P18621 184 aaKnown RBP11.6□□□□□ -0.55
BRCC3-204ENST00000369462 GLUD2P49448 558 aa11.6□□□□□ -0.55
BRCC3-204ENST00000369462 NOMO3P69849 1222 aa11.6□□□□□ -0.55
BRCC3-204ENST00000369462 PSMD5Q16401 504 aa11.6□□□□□ -0.55
BRCC3-204ENST00000369462 RSPO2Q6UXX9 243 aaPredicted RBP11.6□□□□□ -0.55
BRCC3-204ENST00000369462 PAQR9Q6ZVX9 377 aa11.6□□□□□ -0.55
BRCC3-204ENST00000369462 TTC30AQ86WT1 665 aa11.6□□□□□ -0.55
BRCC3-204ENST00000369462 WDTC1Q8N5D0 677 aa11.6□□□□□ -0.55
BRCC3-204ENST00000369462 C1orf131Q8NDD1 294 aaKnown RBP11.6□□□□□ -0.55
BRCC3-204ENST00000369462 AUTS2Q8WXX7 1259 aa11.6□□□□□ -0.55
BRCC3-204ENST00000369462 PIK3R5Q8WYR1 880 aa11.6□□□□□ -0.55
BRCC3-204ENST00000369462 HNRNPABQ99729 332 aaKnown RBP11.6□□□□□ -0.55
BRCC3-204ENST00000369462 PACSIN1Q9BY11 444 aa11.6□□□□□ -0.55
BRCC3-204ENST00000369462 B3GNT5Q9BYG0 378 aa11.6□□□□□ -0.55
BRCC3-204ENST00000369462 PBX4Q9BYU1 374 aa11.6□□□□□ -0.55
BRCC3-204ENST00000369462 LHX5Q9H2C1 402 aa11.6□□□□□ -0.55
BRCC3-204ENST00000369462 NENFQ9UMX5 172 aa11.6□□□□□ -0.55
BRCC3-204ENST00000369462 RWDD3Q9Y3V2 267 aa11.6□□□□□ -0.55
BRCC3-204ENST00000369462 TSC2P49815 1807 aa11.6□□□□□ -0.55
BRCC3-204ENST00000369462 A0A0U1RQJ8 604 aa11.59□□□□□ -0.55
BRCC3-204ENST00000369462 OR6C75A6NL08 312 aa11.59□□□□□ -0.55
BRCC3-204ENST00000369462 LSM8O95777 96 aaKnown RBP11.59□□□□□ -0.55
BRCC3-204ENST00000369462 URODP06132 367 aa11.59□□□□□ -0.55
BRCC3-204ENST00000369462 BMP8BP34820 402 aa11.59□□□□□ -0.55
BRCC3-204ENST00000369462 GPD2P43304 727 aa11.59□□□□□ -0.55
BRCC3-204ENST00000369462 NSFP46459 744 aaKnown RBP11.59□□□□□ -0.55
BRCC3-204ENST00000369462 DSG1Q02413 1049 aa11.59□□□□□ -0.55
BRCC3-204ENST00000369462 MAPRE1Q15691 268 aaKnown RBP11.59□□□□□ -0.55
BRCC3-204ENST00000369462 KIAA1328Q86T90 577 aa11.59□□□□□ -0.55
BRCC3-204ENST00000369462 DCP1BQ8IZD4 617 aaKnown RBP11.59□□□□□ -0.55
BRCC3-204ENST00000369462 TDHQ8IZJ6 230 aa11.59□□□□□ -0.55
BRCC3-204ENST00000369462 ANKRD52Q8NB46 1076 aa11.59□□□□□ -0.55
BRCC3-204ENST00000369462 ATRIPQ8WXE1 791 aa11.59□□□□□ -0.55
BRCC3-204ENST00000369462 MYLPFQ96A32 169 aa11.59□□□□□ -0.55
BRCC3-204ENST00000369462 PKMYT1Q99640 499 aa11.59□□□□□ -0.55
BRCC3-204ENST00000369462 ZCWPW1Q9H0M4 648 aa11.59□□□□□ -0.55
BRCC3-204ENST00000369462 CDY1Q9Y6F8 540 aa11.59□□□□□ -0.55
BRCC3-204ENST00000369462 TBC1D4O60343 1298 aa11.59□□□□□ -0.55
BRCC3-204ENST00000369462 RTN2O75298 545 aa11.59□□□□□ -0.55
BRCC3-204ENST00000369462 CSPG5O95196 566 aa11.59□□□□□ -0.55
BRCC3-204ENST00000369462 CPB1P15086 417 aa11.59□□□□□ -0.55
BRCC3-204ENST00000369462 ABCB4P21439 1286 aa11.59□□□□□ -0.55
BRCC3-204ENST00000369462 C2CD6Q53TS8 623 aa11.59□□□□□ -0.55
BRCC3-204ENST00000369462 ACAD10Q6JQN1 1059 aa11.59□□□□□ -0.55
BRCC3-204ENST00000369462 ZSCAN30Q86W11 494 aa11.59□□□□□ -0.55
BRCC3-204ENST00000369462 FBXO22Q8NEZ5 403 aa11.59□□□□□ -0.55
BRCC3-204ENST00000369462 PGLYRP2Q96PD5 576 aa11.59□□□□□ -0.55
BRCC3-204ENST00000369462 HERC2P3Q9BVR0 1158 aa11.59□□□□□ -0.55
BRCC3-204ENST00000369462 PLVAPQ9BX97 442 aa11.59□□□□□ -0.55
BRCC3-204ENST00000369462 RHOBTB2Q9BYZ6 727 aa11.59□□□□□ -0.55
BRCC3-204ENST00000369462 ZNF518BQ9C0D4 1074 aa11.59□□□□□ -0.55
BRCC3-204ENST00000369462 ISCUQ9H1K1 167 aa11.59□□□□□ -0.55
BRCC3-204ENST00000369462 LUC7LQ9NQ29 371 aaKnown RBP11.59□□□□□ -0.55
BRCC3-204ENST00000369462 CYTH4Q9UIA0 394 aa11.59□□□□□ -0.55
BRCC3-204ENST00000369462 KIAA1671Q9BY89 1806 aa11.59□□□□□ -0.55
BRCC3-204ENST00000369462 MYO7AQ13402 2215 aa11.59□□□□□ -0.55
BRCC3-204ENST00000369462 RCCD1A6NED2 376 aa11.59□□□□□ -0.55
BRCC3-204ENST00000369462 USP27XA6NNY8 438 aa11.59□□□□□ -0.55
BRCC3-204ENST00000369462 TULP2O00295 520 aa11.59□□□□□ -0.55
BRCC3-204ENST00000369462 ADAM12O43184 909 aa11.59□□□□□ -0.55
BRCC3-204ENST00000369462 H2AFZP0C0S5 128 aa11.59□□□□□ -0.55
BRCC3-204ENST00000369462 OR1D2P34982 312 aa11.59□□□□□ -0.55
BRCC3-204ENST00000369462 CA8P35219 290 aa11.59□□□□□ -0.55
BRCC3-204ENST00000369462 GALCP54803 685 aa11.59□□□□□ -0.55
BRCC3-204ENST00000369462 CENPCQ03188 943 aa11.59□□□□□ -0.55
BRCC3-204ENST00000369462 TAP1Q03518 808 aa11.59□□□□□ -0.55
BRCC3-204ENST00000369462 PDE4CQ08493 712 aa11.59□□□□□ -0.55
BRCC3-204ENST00000369462 PKDCCQ504Y2 493 aa11.59□□□□□ -0.55
BRCC3-204ENST00000369462 C10orf76Q5T2E6 689 aa11.59□□□□□ -0.55
BRCC3-204ENST00000369462 CHRDL2Q6WN34 429 aa11.59□□□□□ -0.55
BRCC3-204ENST00000369462 H2AFVQ71UI9 128 aa11.59□□□□□ -0.55
BRCC3-204ENST00000369462 TMC7Q7Z402 723 aa11.59□□□□□ -0.55
BRCC3-204ENST00000369462 SECISBP2LQ93073 1101 aaKnown RBP11.59□□□□□ -0.55
BRCC3-204ENST00000369462 TGS1Q96RS0 853 aaKnown RBP11.59□□□□□ -0.55
BRCC3-204ENST00000369462 LACRTQ9GZZ8 138 aa11.59□□□□□ -0.55
BRCC3-204ENST00000369462 ST7Q9NRC1 585 aa11.59□□□□□ -0.55
BRCC3-204ENST00000369462 MRPL17Q9NRX2 175 aaKnown RBP11.59□□□□□ -0.55
BRCC3-204ENST00000369462 MTRRQ9UBK8 725 aa11.59□□□□□ -0.55
BRCC3-204ENST00000369462 ZSCAN12O43309 604 aa11.58□□□□□ -0.56
BRCC3-204ENST00000369462 BDNFP23560 247 aa11.58□□□□□ -0.56
BRCC3-204ENST00000369462 CDH5P33151 784 aaPredicted RBP11.58□□□□□ -0.56
BRCC3-204ENST00000369462 VAV2P52735 878 aa11.58□□□□□ -0.56
BRCC3-204ENST00000369462 BCAT1P54687 386 aa11.58□□□□□ -0.56
BRCC3-204ENST00000369462 FAM35AQ86V20 835 aa11.58□□□□□ -0.56
BRCC3-204ENST00000369462 SPATA2LQ8IUW3 424 aaPredicted RBP11.58□□□□□ -0.56
BRCC3-204ENST00000369462 CCAR2Q8N163 923 aaKnown RBP11.58□□□□□ -0.56
BRCC3-204ENST00000369462 CLSTN3Q9BQT9 956 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms