RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 CCT5P48643 541 aa10.15□□□□□ -0.78
GABPA-201ENST00000354828 SH3BP5LQ7L8J4 393 aa10.15□□□□□ -0.78
GABPA-201ENST00000354828 SPATA24Q86W54 205 aa10.15□□□□□ -0.78
GABPA-201ENST00000354828 CACUL1Q86Y37 369 aa10.15□□□□□ -0.78
GABPA-201ENST00000354828 KBTBD4Q9NVX7 518 aa10.15□□□□□ -0.78
GABPA-201ENST00000354828 PKP3Q9Y446 797 aa10.15□□□□□ -0.78
GABPA-201ENST00000354828 MOXD2PA6NHM9 499 aa10.15□□□□□ -0.78
GABPA-201ENST00000354828 AP3B1O00203 1094 aa10.15□□□□□ -0.78
GABPA-201ENST00000354828 PRPF4O43172 522 aaKnown RBP eCLIP10.15□□□□□ -0.78
GABPA-201ENST00000354828 MAFO75444 373 aaPredicted RBP10.15□□□□□ -0.78
GABPA-201ENST00000354828 PTGER2P43116 358 aa10.15□□□□□ -0.78
GABPA-201ENST00000354828 LAMB3Q13751 1172 aa10.15□□□□□ -0.78
GABPA-201ENST00000354828 LBRQ14739 615 aaKnown RBP10.15□□□□□ -0.78
GABPA-201ENST00000354828 HSDL1Q3SXM5 330 aa10.15□□□□□ -0.78
GABPA-201ENST00000354828 CCDC137Q6PK04 289 aaKnown RBP10.15□□□□□ -0.78
GABPA-201ENST00000354828 NT5DC4Q86YG4 428 aa10.15□□□□□ -0.78
GABPA-201ENST00000354828 LRRC43Q8N309 656 aa10.15□□□□□ -0.78
GABPA-201ENST00000354828 IL17RAQ96F46 866 aa10.15□□□□□ -0.78
GABPA-201ENST00000354828 CCDC160A6NGH7 325 aa10.15□□□□□ -0.78
GABPA-201ENST00000354828 PNMA6AP0CW24 399 aaPredicted RBP10.15□□□□□ -0.78
GABPA-201ENST00000354828 SYN1P17600 705 aa10.15□□□□□ -0.78
GABPA-201ENST00000354828 BDNFP23560 247 aa10.15□□□□□ -0.78
GABPA-201ENST00000354828 OCRLQ01968 901 aa10.15□□□□□ -0.78
GABPA-201ENST00000354828 APBA1Q02410 837 aa10.15□□□□□ -0.78
GABPA-201ENST00000354828 EARS2Q5JPH6 523 aaKnown RBP10.15□□□□□ -0.78
GABPA-201ENST00000354828 MFN1Q8IWA4 741 aa10.15□□□□□ -0.78
GABPA-201ENST00000354828 ATXN7L3BQ96GX2 97 aa10.15□□□□□ -0.78
GABPA-201ENST00000354828 UROC1Q96N76 676 aa10.15□□□□□ -0.78
GABPA-201ENST00000354828 NUF2Q9BZD4 464 aa10.15□□□□□ -0.78
GABPA-201ENST00000354828 DDX47Q9H0S4 455 aaKnown RBP10.15□□□□□ -0.78
GABPA-201ENST00000354828 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.15□□□□□ -0.78
GABPA-201ENST00000354828 AIPL1Q9NZN9 384 aa10.15□□□□□ -0.78
GABPA-201ENST00000354828 CHORDC1Q9UHD1 332 aaPredicted RBP10.15□□□□□ -0.78
GABPA-201ENST00000354828 TBC1D3BA6NDS4 549 aa10.15□□□□□ -0.79
GABPA-201ENST00000354828 TMEM247A6NEH6 219 aa10.15□□□□□ -0.79
GABPA-201ENST00000354828 FOXN3O00409 490 aaPredicted RBP10.15□□□□□ -0.79
GABPA-201ENST00000354828 COPEO14579 308 aa10.15□□□□□ -0.79
GABPA-201ENST00000354828 PARNO95453 639 aaKnown RBP10.15□□□□□ -0.79
GABPA-201ENST00000354828 SETSIPP0DME0 302 aa10.15□□□□□ -0.79
GABPA-201ENST00000354828 GLRA2P23416 452 aa10.15□□□□□ -0.79
GABPA-201ENST00000354828 RHOAP61586 193 aa10.15□□□□□ -0.79
GABPA-201ENST00000354828 MKRN4PQ13434 485 aaPredicted RBP10.15□□□□□ -0.79
GABPA-201ENST00000354828 TRIM65Q6PJ69 517 aa10.15□□□□□ -0.79
GABPA-201ENST00000354828 OOSP2Q86WS3 158 aa10.15□□□□□ -0.79
GABPA-201ENST00000354828 BRSK2Q8IWQ3 736 aa10.15□□□□□ -0.79
GABPA-201ENST00000354828 CCNYL1Q8N7R7 359 aa10.15□□□□□ -0.79
GABPA-201ENST00000354828 USP13Q92995 863 aaPredicted RBP10.15□□□□□ -0.79
GABPA-201ENST00000354828 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.15□□□□□ -0.79
GABPA-201ENST00000354828 CRLS1Q9UJA2 301 aa10.15□□□□□ -0.79
GABPA-201ENST00000354828 PSMD10O75832 226 aa10.14□□□□□ -0.79
GABPA-201ENST00000354828 DDHD2O94830 711 aa10.14□□□□□ -0.79
GABPA-201ENST00000354828 HSPA4LO95757 839 aa10.14□□□□□ -0.79
GABPA-201ENST00000354828 PTK2BQ14289 1009 aa10.14□□□□□ -0.79
GABPA-201ENST00000354828 PTRHD1Q6GMV3 140 aaKnown RBP10.14□□□□□ -0.79
GABPA-201ENST00000354828 ANKS3Q6ZW76 656 aa10.14□□□□□ -0.79
GABPA-201ENST00000354828 ZBED8Q8IZ13 594 aa10.14□□□□□ -0.79
GABPA-201ENST00000354828 RGL4Q8IZJ4 473 aa10.14□□□□□ -0.79
GABPA-201ENST00000354828 ARNTL2Q8WYA1 636 aa10.14□□□□□ -0.79
GABPA-201ENST00000354828 SRPK1Q96SB4 655 aaKnown RBP10.14□□□□□ -0.79
GABPA-201ENST00000354828 RAB6BQ9NRW1 208 aa10.14□□□□□ -0.79
GABPA-201ENST00000354828 STX7O15400 261 aaKnown RBP10.14□□□□□ -0.79
GABPA-201ENST00000354828 CCL5P13501 91 aa10.14□□□□□ -0.79
GABPA-201ENST00000354828 ITGB5P18084 799 aa10.14□□□□□ -0.79
GABPA-201ENST00000354828 TBX4P57082 545 aa10.14□□□□□ -0.79
GABPA-201ENST00000354828 CAV1Q03135 178 aa10.14□□□□□ -0.79
GABPA-201ENST00000354828 C2CD6Q53TS8 623 aa10.14□□□□□ -0.79
GABPA-201ENST00000354828 ZRANB3Q5FWF4 1079 aa10.14□□□□□ -0.79
GABPA-201ENST00000354828 FAM131BQ86XD5 332 aa10.14□□□□□ -0.79
GABPA-201ENST00000354828 SPATA18Q8TC71 538 aa10.14□□□□□ -0.79
GABPA-201ENST00000354828 ZBTB18Q99592 522 aa10.14□□□□□ -0.79
GABPA-201ENST00000354828 FRMPD4Q14CM0 1322 aa10.14□□□□□ -0.79
GABPA-201ENST00000354828 SGPL1O95470 568 aa10.14□□□□□ -0.79
GABPA-201ENST00000354828 ACRP10323 421 aa10.14□□□□□ -0.79
GABPA-201ENST00000354828 LBX1P52954 281 aa10.14□□□□□ -0.79
GABPA-201ENST00000354828 CUL1Q13616 776 aa10.14□□□□□ -0.79
GABPA-201ENST00000354828 PCBP1Q15365 356 aaKnown RBP eCLIP10.14□□□□□ -0.79
GABPA-201ENST00000354828 PSMD5Q16401 504 aa10.14□□□□□ -0.79
GABPA-201ENST00000354828 NOL9Q5SY16 702 aaKnown RBP10.14□□□□□ -0.79
GABPA-201ENST00000354828 IZUMO3Q5VZ72 239 aa10.14□□□□□ -0.79
GABPA-201ENST00000354828 TMEM86AQ8N2M4 240 aa10.14□□□□□ -0.79
GABPA-201ENST00000354828 ERLEC1Q96DZ1 483 aa10.14□□□□□ -0.79
GABPA-201ENST00000354828 RMDN2Q96LZ7 410 aa10.14□□□□□ -0.79
GABPA-201ENST00000354828 PPP1R2P1Q96PQ5 205 aa10.14□□□□□ -0.79
GABPA-201ENST00000354828 SPG21Q9NZD8 308 aa10.14□□□□□ -0.79
GABPA-201ENST00000354828 ZFATQ9P243 1243 aa10.14□□□□□ -0.79
GABPA-201ENST00000354828 ZMYM2Q9UBW7 1377 aa10.14□□□□□ -0.79
GABPA-201ENST00000354828 A0A1B0GTH6 734 aa10.14□□□□□ -0.79
GABPA-201ENST00000354828 PPP1R3GB7ZBB8 358 aa10.14□□□□□ -0.79
GABPA-201ENST00000354828 MTSS1O43312 755 aa10.14□□□□□ -0.79
GABPA-201ENST00000354828 CST8O60676 142 aa10.14□□□□□ -0.79
GABPA-201ENST00000354828 PMPCBO75439 489 aa10.14□□□□□ -0.79
GABPA-201ENST00000354828 LAG3P18627 525 aa10.14□□□□□ -0.79
GABPA-201ENST00000354828 KLK7P49862 253 aa10.14□□□□□ -0.79
GABPA-201ENST00000354828 ZKSCAN8Q15776 578 aaPredicted RBP10.14□□□□□ -0.79
GABPA-201ENST00000354828 SLFN11Q7Z7L1 901 aa10.14□□□□□ -0.79
GABPA-201ENST00000354828 FBXO22Q8NEZ5 403 aa10.14□□□□□ -0.79
GABPA-201ENST00000354828 SKA1Q96BD8 255 aa10.14□□□□□ -0.79
GABPA-201ENST00000354828 NFU1Q9UMS0 254 aa10.14□□□□□ -0.79
GABPA-201ENST00000354828 GLUD1P00367 558 aa10.13□□□□□ -0.79
GABPA-201ENST00000354828 OAS2P29728 719 aaKnown RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms