RNA–Protein interactions for RNA: ENST00000330452.7

PRKCD-201, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-201ENST00000330452 TNIP1Q15025 636 aa17.97■□□□□ 0.47
PRKCD-201ENST00000330452 LLGL1Q15334 1064 aa17.97■□□□□ 0.47
PRKCD-201ENST00000330452 UBAP2Q5T6F2 1119 aaKnown RBP17.97■□□□□ 0.47
PRKCD-201ENST00000330452 TTC27Q6P3X3 843 aa17.97■□□□□ 0.47
PRKCD-201ENST00000330452 ZDHHC24Q6UX98 284 aa17.97■□□□□ 0.47
PRKCD-201ENST00000330452 C4orf50Q6ZRC1 276 aa17.97■□□□□ 0.47
PRKCD-201ENST00000330452 PPP1R10Q96QC0 940 aaKnown RBP17.97■□□□□ 0.47
PRKCD-201ENST00000330452 LBHD1Q9BQE6 289 aaPredicted RBP17.97■□□□□ 0.47
PRKCD-201ENST00000330452 ZSWIM1Q9BR11 485 aa17.97■□□□□ 0.47
PRKCD-201ENST00000330452 SLC7A5P2Q9GIP4 190 aa17.97■□□□□ 0.47
PRKCD-201ENST00000330452 NDEL1Q9GZM8 345 aa17.97■□□□□ 0.47
PRKCD-201ENST00000330452 EPB41L1Q9H4G0 881 aa17.97■□□□□ 0.47
PRKCD-201ENST00000330452 TRPC7Q9HCX4 862 aa17.97■□□□□ 0.47
PRKCD-201ENST00000330452 TLDC2A0PJX2 215 aa17.96■□□□□ 0.47
PRKCD-201ENST00000330452 E9PBE3 544 aa17.96■□□□□ 0.47
PRKCD-201ENST00000330452 MATN2O00339 956 aa17.96■□□□□ 0.47
PRKCD-201ENST00000330452 ACADVLP49748 655 aa17.96■□□□□ 0.47
PRKCD-201ENST00000330452 TGFB2P61812 414 aa17.96■□□□□ 0.47
PRKCD-201ENST00000330452 MTMR1Q13613 665 aa17.96■□□□□ 0.47
PRKCD-201ENST00000330452 SPIDRQ14159 915 aa17.96■□□□□ 0.47
PRKCD-201ENST00000330452 LRRC14Q15048 493 aa17.96■□□□□ 0.47
PRKCD-201ENST00000330452 ADRM1Q16186 407 aa17.96■□□□□ 0.47
PRKCD-201ENST00000330452 C11orf63Q6NUN7 778 aa17.96■□□□□ 0.47
PRKCD-201ENST00000330452 RFWD3Q6PCD5 774 aa17.96■□□□□ 0.47
PRKCD-201ENST00000330452 PATL1Q86TB9 770 aaKnown RBP17.96■□□□□ 0.47
PRKCD-201ENST00000330452 BPHLQ86WA6 291 aaPredicted RBP17.96■□□□□ 0.47
PRKCD-201ENST00000330452 NUP93Q8N1F7 819 aa17.96■□□□□ 0.47
PRKCD-201ENST00000330452 BBS5Q8N3I7 341 aa17.96■□□□□ 0.47
PRKCD-201ENST00000330452 UBL4BQ8N7F7 174 aa17.96■□□□□ 0.47
PRKCD-201ENST00000330452 DGCR14Q96DF8 476 aaKnown RBP17.96■□□□□ 0.47
PRKCD-201ENST00000330452 CEP295NLQ96MC4 621 aa17.96■□□□□ 0.47
PRKCD-201ENST00000330452 KIAA1683Q9H0B3 1180 aa17.96■□□□□ 0.47
PRKCD-201ENST00000330452 NOCTQ9UK39 431 aaKnown RBP17.96■□□□□ 0.47
PRKCD-201ENST00000330452 DBR1Q9UK59 544 aaKnown RBP17.96■□□□□ 0.47
PRKCD-201ENST00000330452 NOX1Q9Y5S8 564 aa17.96■□□□□ 0.47
PRKCD-201ENST00000330452 ANKRD63C9JTQ0 380 aa17.96■□□□□ 0.47
PRKCD-201ENST00000330452 KDM1AO60341 852 aa17.96■□□□□ 0.47
PRKCD-201ENST00000330452 PTGIRP43119 386 aa17.96■□□□□ 0.47
PRKCD-201ENST00000330452 TMED10P49755 219 aaKnown RBP17.96■□□□□ 0.47
PRKCD-201ENST00000330452 HADHBP55084 474 aaKnown RBP17.96■□□□□ 0.47
PRKCD-201ENST00000330452 GTF2BQ00403 316 aa17.96■□□□□ 0.47
PRKCD-201ENST00000330452 FXNQ16595 210 aa17.96■□□□□ 0.47
PRKCD-201ENST00000330452 FAM102BQ5T8I3 360 aa17.96■□□□□ 0.47
PRKCD-201ENST00000330452 DEPDC1Q5TB30 811 aa17.96■□□□□ 0.47
PRKCD-201ENST00000330452 CGB2Q6NT52 195 aa17.96■□□□□ 0.47
PRKCD-201ENST00000330452 TAAR1Q96RJ0 339 aa17.96■□□□□ 0.47
PRKCD-201ENST00000330452 HEPHQ9BQS7 1158 aa17.96■□□□□ 0.47
PRKCD-201ENST00000330452 UBIAD1Q9Y5Z9 338 aa17.96■□□□□ 0.47
PRKCD-201ENST00000330452 RNASEH1O60930 286 aaKnown RBP17.95■□□□□ 0.46
PRKCD-201ENST00000330452 MYCLP12524 364 aaPredicted RBP17.95■□□□□ 0.46
PRKCD-201ENST00000330452 ADSSP30520 456 aa17.95■□□□□ 0.46
PRKCD-201ENST00000330452 FAM209AQ5JX71 171 aa17.95■□□□□ 0.46
PRKCD-201ENST00000330452 C12orf56Q8IXR9 622 aa17.95■□□□□ 0.46
PRKCD-201ENST00000330452 ZBED3Q96IU2 234 aaPredicted RBP17.95■□□□□ 0.46
PRKCD-201ENST00000330452 USP29Q9HBJ7 922 aa17.95■□□□□ 0.46
PRKCD-201ENST00000330452 RGPD3A6NKT7 1758 aaPredicted RBP17.95■□□□□ 0.46
PRKCD-201ENST00000330452 RGPD4Q7Z3J3 1758 aa17.95■□□□□ 0.46
PRKCD-201ENST00000330452 SYNGAP1Q96PV0 1343 aa17.95■□□□□ 0.46
PRKCD-201ENST00000330452 BRCA2P51587 3418 aa17.95■□□□□ 0.46
PRKCD-201ENST00000330452 FAM187AA6NFU0 413 aa17.95■□□□□ 0.46
PRKCD-201ENST00000330452 VILLO15195 856 aa17.95■□□□□ 0.46
PRKCD-201ENST00000330452 RGS16O15492 202 aaPredicted RBP17.95■□□□□ 0.46
PRKCD-201ENST00000330452 MGEA5O60502 916 aa17.95■□□□□ 0.46
PRKCD-201ENST00000330452 PHF2O75151 1096 aa17.95■□□□□ 0.46
PRKCD-201ENST00000330452 CALCAP01258 141 aa17.95■□□□□ 0.46
PRKCD-201ENST00000330452 MAPTP10636 758 aaKnown RBP17.95■□□□□ 0.46
PRKCD-201ENST00000330452 ALCAMQ13740 583 aa17.95■□□□□ 0.46
PRKCD-201ENST00000330452 LRP8Q14114 963 aa17.95■□□□□ 0.46
PRKCD-201ENST00000330452 DHX34Q14147 1143 aaKnown RBP17.95■□□□□ 0.46
PRKCD-201ENST00000330452 NSMFQ6X4W1 530 aa17.95■□□□□ 0.46
PRKCD-201ENST00000330452 FAM71AQ8IYT1 594 aa17.95■□□□□ 0.46
PRKCD-201ENST00000330452 SYTL5Q8TDW5 730 aaPredicted RBP17.95■□□□□ 0.46
PRKCD-201ENST00000330452 GFM2Q969S9 779 aaKnown RBP17.95■□□□□ 0.46
PRKCD-201ENST00000330452 FAM84AQ96KN4 292 aa17.95■□□□□ 0.46
PRKCD-201ENST00000330452 TOPORSQ9NS56 1045 aaPredicted RBP17.95■□□□□ 0.46
PRKCD-201ENST00000330452 GRHL1Q9NZI5 618 aa17.95■□□□□ 0.46
PRKCD-201ENST00000330452 NDUFA13Q9P0J0 144 aa17.95■□□□□ 0.46
PRKCD-201ENST00000330452 CCDC169A6NNP5 214 aa17.95■□□□□ 0.46
PRKCD-201ENST00000330452 MIF4GDA9UHW6 222 aaKnown RBP17.95■□□□□ 0.46
PRKCD-201ENST00000330452 ASNSP08243 561 aa17.95■□□□□ 0.46
PRKCD-201ENST00000330452 MARK3P27448 753 aa17.95■□□□□ 0.46
PRKCD-201ENST00000330452 RPL21P46778 160 aaKnown RBP17.95■□□□□ 0.46
PRKCD-201ENST00000330452 SOX10P56693 466 aa17.95■□□□□ 0.46
PRKCD-201ENST00000330452 FMO1Q01740 532 aa17.95■□□□□ 0.46
PRKCD-201ENST00000330452 PPP2R5EQ16537 467 aa17.95■□□□□ 0.46
PRKCD-201ENST00000330452 ERP27Q96DN0 273 aa17.95■□□□□ 0.46
PRKCD-201ENST00000330452 MAK16Q9BXY0 300 aaKnown RBP17.95■□□□□ 0.46
PRKCD-201ENST00000330452 TRIM17Q9Y577 477 aa17.95■□□□□ 0.46
PRKCD-201ENST00000330452 PFASO15067 1338 aa17.94■□□□□ 0.46
PRKCD-201ENST00000330452 UMODL1Q5DID0 1318 aa17.94■□□□□ 0.46
PRKCD-201ENST00000330452 CEP350Q5VT06 3117 aa17.94■□□□□ 0.46
PRKCD-201ENST00000330452 A0A1W2PQ67 120 aa17.94■□□□□ 0.46
PRKCD-201ENST00000330452 ADCY3O60266 1144 aa17.94■□□□□ 0.46
PRKCD-201ENST00000330452 MSLNQ13421 630 aaPredicted RBP17.94■□□□□ 0.46
PRKCD-201ENST00000330452 SNRNP35Q16560 246 aaKnown RBP17.94■□□□□ 0.46
PRKCD-201ENST00000330452 XKR9Q5GH70 373 aa17.94■□□□□ 0.46
PRKCD-201ENST00000330452 RIN3Q8TB24 985 aa17.94■□□□□ 0.46
PRKCD-201ENST00000330452 DTX3LQ8TDB6 740 aa17.94■□□□□ 0.46
PRKCD-201ENST00000330452 NUP85Q9BW27 656 aa17.94■□□□□ 0.46
PRKCD-201ENST00000330452 HBS1LQ9Y450 684 aaKnown RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms