RNA–Protein interactions for RNA: snR55

snR55, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR55, Length 98 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR55snR55 SRL3P36167 246 aa-1.77□□□□□ -2.69
snR55snR55 KTI11Q3E840 82 aa-1.77□□□□□ -2.69
snR55snR55 UTP20P35194 2493 aaKnown RBP-1.77□□□□□ -2.69
snR55snR55 ARG80P07249 177 aa-1.78□□□□□ -2.69
snR55snR55 TRX3P25372 127 aa-1.78□□□□□ -2.69
snR55snR55 LST8P41318 303 aa-1.78□□□□□ -2.69
snR55snR55 FMP32P43557 207 aa-1.78□□□□□ -2.69
snR55snR55 GIS3Q12418 502 aa-1.78□□□□□ -2.69
snR55snR55 MDN1Q12019 4910 aaKnown RBP-1.79□□□□□ -2.7
snR55snR55 TY4B-JP47024 1803 aa-1.79□□□□□ -2.7
snR55snR55 QCR7P00128 127 aa-1.79□□□□□ -2.7
snR55snR55 NUF2P33895 451 aa-1.79□□□□□ -2.7
snR55snR55 FES1P38260 290 aa-1.79□□□□□ -2.7
snR55snR55 YNR064CP53750 290 aa-1.79□□□□□ -2.7
snR55snR55 IRC19Q07843 230 aa-1.79□□□□□ -2.7
snR55snR55 RFU1Q08003 200 aa-1.79□□□□□ -2.7
snR55snR55 SAC3P46674 1301 aa-1.8□□□□□ -2.7
snR55snR55 AIM4P38305 123 aaPredicted RBP-1.8□□□□□ -2.7
snR55snR55 RCF2P53721 224 aa-1.8□□□□□ -2.7
snR55snR55 NOC4Q06512 552 aaPredicted RBP-1.8□□□□□ -2.7
snR55snR55 BRX1Q08235 291 aaKnown RBP-1.8□□□□□ -2.7
snR55snR55 YGL041W-AP0C5N3 154 aa-1.81□□□□□ -2.7
snR55snR55 RAD51P25454 400 aa-1.81□□□□□ -2.7
snR55snR55 YDR102CQ03864 110 aa-1.81□□□□□ -2.7
snR55snR55 YPR153WQ06537 140 aa-1.81□□□□□ -2.7
snR55snR55 NHP6AP11632 93 aaKnown RBP-1.82□□□□□ -2.7
snR55snR55 CBF1P17106 351 aa-1.82□□□□□ -2.7
snR55snR55 MRS4P23500 304 aa-1.82□□□□□ -2.7
snR55snR55 YRF1-3P0CX14 1859 aa-1.82□□□□□ -2.7
snR55snR55 YRF1-7P0CX15 1859 aa-1.82□□□□□ -2.7
snR55snR55 SPA2P23201 1466 aaKnown RBP-1.82□□□□□ -2.7
snR55snR55 SRP102P36057 244 aaPredicted RBP-1.83□□□□□ -2.7
snR55snR55 YEA6P39953 335 aa-1.83□□□□□ -2.7
snR55snR55 MRPL31P14063 131 aaPredicted RBP-1.84□□□□□ -2.7
snR55snR55 YKR041WP36134 250 aa-1.84□□□□□ -2.7
snR55snR55 SRP14P38985 146 aa-1.84□□□□□ -2.7
snR55snR55 XPT1P47165 209 aa-1.84□□□□□ -2.7
snR55snR55 YNL190WP53872 204 aa-1.84□□□□□ -2.7
snR55snR55 YNL019CP53975 284 aa-1.84□□□□□ -2.7
snR55snR55 HPT1Q04178 221 aaKnown RBP-1.84□□□□□ -2.7
snR55snR55 GRX8Q05926 109 aa-1.84□□□□□ -2.7
snR55snR55 SRP21P32342 167 aa-1.85□□□□□ -2.71
snR55snR55 NVJ1P38881 321 aa-1.85□□□□□ -2.71
snR55snR55 YGL101WP53144 215 aa-1.85□□□□□ -2.71
snR55snR55 FUN14P18411 198 aa-1.86□□□□□ -2.71
snR55snR55 MRPS17Q03246 237 aaPredicted RBP-1.86□□□□□ -2.71
snR55snR55 RPL40AP0CH08 128 aaKnown RBP-1.87□□□□□ -2.71
snR55snR55 RPL40BP0CH09 128 aaKnown RBP-1.87□□□□□ -2.71
snR55snR55 NMT1P14743 455 aa-1.87□□□□□ -2.71
snR55snR55 BUB2P26448 306 aaPredicted RBP-1.87□□□□□ -2.71
snR55snR55 ARL3Q02804 198 aa-1.87□□□□□ -2.71
snR55snR55 GAT4P40569 121 aa-1.88□□□□□ -2.71
snR55snR55 PGA2P53903 129 aa-1.88□□□□□ -2.71
snR55snR55 RPA12P32529 125 aaKnown RBP-1.89□□□□□ -2.71
snR55snR55 YHR213WP0CI67 198 aa-1.9□□□□□ -2.71
snR55snR55 UTP11P34247 250 aaPredicted RBP-1.9□□□□□ -2.71
snR55snR55 SRX1P36077 127 aa-1.9□□□□□ -2.71
snR55snR55 GPI2P46961 280 aa-1.9□□□□□ -2.71
snR55snR55 THI74Q04083 370 aa-1.9□□□□□ -2.71
snR55snR55 YPR117WQ06116 2489 aa-1.9□□□□□ -2.71
snR55snR55 YSF3P0C074 85 aaPredicted RBP-1.91□□□□□ -2.72
snR55snR55 DYN1P36022 4092 aa-1.91□□□□□ -2.72
snR55snR55 COX5BP00425 151 aa-1.92□□□□□ -2.72
snR55snR55 MRPL11P36521 249 aaPredicted RBP-1.92□□□□□ -2.72
snR55snR55 VMA10P48836 114 aaKnown RBP-1.93□□□□□ -2.72
snR55snR55 EMP24P32803 203 aaKnown RBP-1.94□□□□□ -2.72
snR55snR55 HUT1Q12520 339 aa-1.94□□□□□ -2.72
snR55snR55 TEL1P38110 2787 aa-1.94□□□□□ -2.72
snR55snR55 YHR173CP38864 112 aa-1.95□□□□□ -2.72
snR55snR55 LCL1Q02786 101 aa-1.95□□□□□ -2.72
snR55snR55 COF1Q03048 143 aaKnown RBP-1.95□□□□□ -2.72
snR55snR55 ANB1P19211 157 aa-1.96□□□□□ -2.72
snR55snR55 ATP5P09457 212 aa-1.97□□□□□ -2.72
snR55snR55 SNO1Q03144 224 aa-1.97□□□□□ -2.72
snR55snR55 PLP1Q04004 230 aa-1.97□□□□□ -2.72
snR55snR55 SHG1P38337 142 aa-1.98□□□□□ -2.73
snR55snR55 JAC1P53193 184 aa-1.98□□□□□ -2.73
snR55snR55 YCL001W-AP87012 153 aa-1.98□□□□□ -2.73
snR55snR55 SCS22Q6Q595 175 aa-1.99□□□□□ -2.73
snR55snR55 RSF2P46974 1380 aa-1.99□□□□□ -2.73
snR55snR55 FYV5P25585 152 aa-2□□□□□ -2.73
snR55snR55 SGF11Q03067 99 aa-2□□□□□ -2.73
snR55snR55 YLR046CQ12253 270 aa-2□□□□□ -2.73
snR55snR55 VPS55P47111 140 aa-2.01□□□□□ -2.73
snR55snR55 ATP19P81451 68 aa-2.01□□□□□ -2.73
snR55snR55 PEX11Q12462 236 aa-2.01□□□□□ -2.73
snR55snR55 MED11Q99278 115 aa-2.01□□□□□ -2.73
snR55snR55 TY4B-HP0C2J7 1802 aa-2.02□□□□□ -2.73
snR55snR55 PFY1P07274 126 aa-2.02□□□□□ -2.73
snR55snR55 YER121WP40076 114 aa-2.02□□□□□ -2.73
snR55snR55 HSK3P69852 69 aa-2.02□□□□□ -2.73
snR55snR55 SUA7P29055 345 aaPredicted RBP-2.03□□□□□ -2.73
snR55snR55 YBR072C-AQ3E794 53 aa-2.03□□□□□ -2.73
snR55snR55 ATX1P38636 73 aa-2.04□□□□□ -2.74
snR55snR55 YPL067CQ02754 198 aa-2.04□□□□□ -2.74
snR55snR55 SNT2P53127 1403 aa-2.05□□□□□ -2.74
snR55snR55 YGL193CP53097 103 aa-2.05□□□□□ -2.74
snR55snR55 ORM1P53224 222 aa-2.05□□□□□ -2.74
snR55snR55 YNL140CP53910 189 aa-2.06□□□□□ -2.74
snR55snR55 JIP3O13555 125 aa-2.07□□□□□ -2.74
Retrieved 100 of 5,963 RNA–protein pairs in 87.8 ms