RNA–Protein interactions for RNA: snR43

snR43, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR43, Length 209 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR43snR43 SFT2P38166 215 aa1.75□□□□□ -2.13
snR43snR43 YPC1P38298 316 aa1.75□□□□□ -2.13
snR43snR43 YHR022CP38763 256 aa1.75□□□□□ -2.13
snR43snR43 RRF1P38771 230 aa1.75□□□□□ -2.13
snR43snR43 RPL13BP40212 199 aaKnown RBP1.75□□□□□ -2.13
snR43snR43 SPC1P46965 94 aa1.75□□□□□ -2.13
snR43snR43 TPN1P53099 579 aa1.75□□□□□ -2.13
snR43snR43 BOR1P53838 576 aa1.75□□□□□ -2.13
snR43snR43 PDR17P53844 350 aa1.75□□□□□ -2.13
snR43snR43 MGR3Q04472 501 aa1.75□□□□□ -2.13
snR43snR43 AIM45Q12480 344 aaKnown RBP1.75□□□□□ -2.13
snR43snR43 RPL13AQ12690 199 aaPredicted RBP1.75□□□□□ -2.13
snR43snR43 YPR145C-AQ2V2P0 78 aa1.75□□□□□ -2.13
snR43snR43 YGR240C-AQ3E786 66 aa1.75□□□□□ -2.13
snR43snR43 COA2Q3E823 68 aa1.75□□□□□ -2.13
snR43snR43 YLL066W-BQ8TGJ7 56 aa1.75□□□□□ -2.13
snR43snR43 TPI1P00942 248 aaKnown RBP1.74□□□□□ -2.13
snR43snR43 VAR1P02381 398 aa1.74□□□□□ -2.13
snR43snR43 PUT1P09368 476 aa1.74□□□□□ -2.13
snR43snR43 RPS25BP0C0T4 108 aaKnown RBP1.74□□□□□ -2.13
snR43snR43 NHP6BP11633 99 aaKnown RBP1.74□□□□□ -2.13
snR43snR43 EMP24P32803 203 aaKnown RBP1.74□□□□□ -2.13
snR43snR43 TIR2P33890 251 aa1.74□□□□□ -2.13
snR43snR43 SHB17P36136 271 aaKnown RBP1.74□□□□□ -2.13
snR43snR43 SLM6P38343 150 aa1.74□□□□□ -2.13
snR43snR43 PET100P38958 111 aa1.74□□□□□ -2.13
snR43snR43 SPI1P40092 148 aa1.74□□□□□ -2.13
snR43snR43 YGR269WP40326 108 aa1.74□□□□□ -2.13
snR43snR43 SWM2P40342 146 aa1.74□□□□□ -2.13
snR43snR43 SAS2P40963 338 aa1.74□□□□□ -2.13
snR43snR43 SER2P42941 309 aa1.74□□□□□ -2.13
snR43snR43 DSK2P48510 373 aa1.74□□□□□ -2.13
snR43snR43 MIC27P50945 234 aa1.74□□□□□ -2.13
snR43snR43 YPS5P53057 165 aa1.74□□□□□ -2.13
snR43snR43 YMR090WQ04304 227 aaKnown RBP1.74□□□□□ -2.13
snR43snR43 COA4Q05809 96 aa1.74□□□□□ -2.13
snR43snR43 PHO92Q06390 306 aa1.74□□□□□ -2.13
snR43snR43 ERV2Q12284 196 aa1.74□□□□□ -2.13
snR43snR43 HTZ1Q12692 134 aaKnown RBP1.74□□□□□ -2.13
snR43snR43 RPS25AQ3E792 108 aaPredicted RBP1.74□□□□□ -2.13
snR43snR43 YDR157WA0A023PZE8 133 aa1.73□□□□□ -2.13
snR43snR43 YMR316C-AI2HB70 103 aa1.73□□□□□ -2.13
snR43snR43 AGA1P32323 725 aa1.73□□□□□ -2.13
snR43snR43 SUA5P32579 426 aa1.73□□□□□ -2.13
snR43snR43 NPL6P32832 435 aa1.73□□□□□ -2.13
snR43snR43 LSM2P38203 95 aaKnown RBP1.73□□□□□ -2.13
snR43snR43 ASP1P38986 381 aaPredicted RBP1.73□□□□□ -2.13
snR43snR43 YCH1P42937 148 aa1.73□□□□□ -2.13
snR43snR43 CWC23P52868 283 aaPredicted RBP1.73□□□□□ -2.13
snR43snR43 TOM7P53507 60 aa1.73□□□□□ -2.13
snR43snR43 LSM7P53905 115 aaKnown RBP1.73□□□□□ -2.13
snR43snR43 ODC1Q03028 310 aa1.73□□□□□ -2.13
snR43snR43 TMA23Q03525 211 aa1.73□□□□□ -2.13
snR43snR43 YMR253CQ04835 414 aa1.73□□□□□ -2.13
snR43snR43 RDI1Q12434 202 aa1.73□□□□□ -2.13
snR43snR43 NKP1Q12493 238 aa1.73□□□□□ -2.13
snR43snR43 DFM1Q12743 341 aaKnown RBP1.73□□□□□ -2.13
snR43snR43 ISN1Q99312 450 aa1.73□□□□□ -2.13
snR43snR43 RTC6O14464 93 aa1.72□□□□□ -2.13
snR43snR43 DFR1P07807 211 aaKnown RBP RIP-Chip data1.72□□□□□ -2.13not detected
snR43snR43 YJL197C-AP0C5P0 93 aa1.72□□□□□ -2.13
snR43snR43 CPT1P17898 393 aa1.72□□□□□ -2.13
snR43snR43 RNA15P25299 296 aaPredicted RBP1.72□□□□□ -2.13
snR43snR43 SPT14P32363 452 aa1.72□□□□□ -2.13
snR43snR43 PPQ1P32945 549 aa1.72□□□□□ -2.13
snR43snR43 IPI1P38803 334 aaPredicted RBP1.72□□□□□ -2.13
snR43snR43 YJL028WP47062 111 aa1.72□□□□□ -2.13
snR43snR43 GPI15P53961 229 aa1.72□□□□□ -2.13
snR43snR43 YMR082CQ04276 118 aa1.72□□□□□ -2.13
snR43snR43 SHH3Q04487 196 aa1.72□□□□□ -2.13
snR43snR43 PBA1Q05778 276 aa1.72□□□□□ -2.13
snR43snR43 YLR042CQ07990 161 aa1.72□□□□□ -2.13
snR43snR43 YHR213W-AQ8TGT4 77 aa1.72□□□□□ -2.13
snR43snR43 RPB3P16370 318 aaKnown RBP1.71□□□□□ -2.14
snR43snR43 MRPL20P22354 195 aaPredicted RBP1.71□□□□□ -2.14
snR43snR43 MBB1P39534 108 aa1.71□□□□□ -2.14
snR43snR43 RRT13P40042 185 aa1.71□□□□□ -2.14
snR43snR43 CDC40P40968 455 aaPredicted RBP1.71□□□□□ -2.14
snR43snR43 YFL067WP43537 175 aa1.71□□□□□ -2.14
snR43snR43 YDR366CP87287 132 aa1.71□□□□□ -2.14
snR43snR43 MRX11Q03079 207 aa1.71□□□□□ -2.14
snR43snR43 PRR2Q12310 699 aa1.71□□□□□ -2.14
snR43snR43 TFB5Q3E7C1 72 aaPredicted RBP1.71□□□□□ -2.14
snR43snR43 YOL085CQ99345 113 aa1.71□□□□□ -2.14
snR43snR43 RPL33AP05744 107 aaKnown RBP1.7□□□□□ -2.14
snR43snR43 SPS2P08459 502 aa1.7□□□□□ -2.14
snR43snR43 YDR034C-AP0C289 58 aa1.7□□□□□ -2.14
snR43snR43 YBL059WP34224 193 aa1.7□□□□□ -2.14
snR43snR43 YEA6P39953 335 aa1.7□□□□□ -2.14
snR43snR43 RPL33BP41056 107 aaKnown RBP1.7□□□□□ -2.14
snR43snR43 BRP1P53194 125 aa1.7□□□□□ -2.14
snR43snR43 ERP1Q05359 219 aaKnown RBP1.7□□□□□ -2.14
snR43snR43 YLR179CQ06252 201 aaKnown RBP1.7□□□□□ -2.14
snR43snR43 FIT2Q08906 153 aa1.7□□□□□ -2.14
snR43snR43 IES3Q12345 250 aa1.7□□□□□ -2.14
snR43snR43 Q0255P03881 472 aa1.69□□□□□ -2.14
snR43snR43 MRS1P07266 363 aa1.69□□□□□ -2.14
snR43snR43 YNL217WP40152 326 aa1.69□□□□□ -2.14
snR43snR43 MRPS16Q02608 121 aa1.69□□□□□ -2.14
snR43snR43 YDR115WQ04598 105 aa1.69□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 62.5 ms