RNA–Protein interactions for RNA: YPR107C

YTH1, Transcript of Essential RNA-binding component of cleavage and polyadenylation factor, yeastyeast

Gene YTH1, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YTH1YPR107C FMN1Q03778 218 aa3.5□□□□□ -1.85
YTH1YPR107C CSN9Q03981 162 aa3.5□□□□□ -1.85
YTH1YPR107C SPC2Q04969 178 aa3.5□□□□□ -1.85
YTH1YPR107C TAR1Q8TGM6 124 aa3.5□□□□□ -1.85
YTH1YPR107C POP7P38291 140 aa3.49□□□□□ -1.85
YTH1YPR107C CYC2P38909 366 aa3.49□□□□□ -1.85
YTH1YPR107C GIM4P40005 111 aaKnown RBP3.49□□□□□ -1.85
YTH1YPR107C YGR042WP53227 271 aa3.49□□□□□ -1.85
YTH1YPR107C NMA1Q06178 401 aaKnown RBP3.49□□□□□ -1.85
YTH1YPR107C SCS22Q6Q595 175 aa3.49□□□□□ -1.85
YTH1YPR107C YGL041W-AP0C5N3 154 aa3.48□□□□□ -1.85
YTH1YPR107C YCL042WP25572 119 aa3.48□□□□□ -1.85
YTH1YPR107C YGL204CP53089 101 aa3.48□□□□□ -1.85
YTH1YPR107C RCF2P53721 224 aa3.48□□□□□ -1.85
YTH1YPR107C KEI1Q06346 221 aa3.48□□□□□ -1.85
YTH1YPR107C SUI1P32911 108 aaKnown RBP3.47□□□□□ -1.85
YTH1YPR107C PHB1P40961 287 aa3.47□□□□□ -1.85
YTH1YPR107C SHB17P36136 271 aaKnown RBP3.46□□□□□ -1.86
YTH1YPR107C UBR1P19812 1950 aa3.45□□□□□ -1.86
YTH1YPR107C YBR242WP38331 238 aa3.45□□□□□ -1.86
YTH1YPR107C IRC19Q07843 230 aa3.44□□□□□ -1.86
YTH1YPR107C PRE1P22141 198 aaKnown RBP3.43□□□□□ -1.86
YTH1YPR107C GLC8P41818 229 aa3.43□□□□□ -1.86
YTH1YPR107C RIB3Q99258 208 aa3.43□□□□□ -1.86
YTH1YPR107C YGL230CP53074 147 aa3.42□□□□□ -1.86
YTH1YPR107C AVO2Q04749 426 aa3.42□□□□□ -1.86
YTH1YPR107C SPC3Q12133 184 aa3.42□□□□□ -1.86
YTH1YPR107C MRPL15P36523 253 aa3.41□□□□□ -1.86
YTH1YPR107C VMA10P48836 114 aaKnown RBP3.41□□□□□ -1.86
YTH1YPR107C YEL014CP39999 101 aa3.4□□□□□ -1.87
YTH1YPR107C SPG1P50088 95 aa3.4□□□□□ -1.87
YTH1YPR107C ATP14Q12349 124 aa3.4□□□□□ -1.87
YTH1YPR107C RIF1P29539 1916 aa3.39□□□□□ -1.87
YTH1YPR107C ECM31P38122 312 aa3.39□□□□□ -1.87
YTH1YPR107C APS3P47064 194 aa3.39□□□□□ -1.87
YTH1YPR107C AQY2P0CD90 149 aa3.38□□□□□ -1.87
YTH1YPR107C SUA7P29055 345 aaPredicted RBP3.38□□□□□ -1.87
YTH1YPR107C YHR212W-AP0CX91 67 aa3.37□□□□□ -1.87
YTH1YPR107C VAR1P02381 398 aa3.36□□□□□ -1.87
YTH1YPR107C FIT1Q04433 528 aa3.36□□□□□ -1.87
YTH1YPR107C KIN28P06242 306 aa3.35□□□□□ -1.87
YTH1YPR107C YHR140WP38842 239 aa3.35□□□□□ -1.87
YTH1YPR107C LSM8P47093 109 aaKnown RBP3.35□□□□□ -1.87
YTH1YPR107C YNL019CP53975 284 aa3.35□□□□□ -1.87
YTH1YPR107C YPR153WQ06537 140 aa3.35□□□□□ -1.87
YTH1YPR107C CMC4Q3E7A9 73 aa3.35□□□□□ -1.87
YTH1YPR107C EMC4P53073 190 aa3.34□□□□□ -1.87
YTH1YPR107C YPR203WQ08994 102 aa3.34□□□□□ -1.87
YTH1YPR107C FCY1Q12178 158 aa3.34□□□□□ -1.87
YTH1YPR107C YLR361C-AQ3E795 98 aa3.34□□□□□ -1.87
YTH1YPR107C DIE2P50076 525 aa3.33□□□□□ -1.88
YTH1YPR107C HSP150P32478 413 aa3.32□□□□□ -1.88
YTH1YPR107C YKR070WP36151 352 aaKnown RBP3.31□□□□□ -1.88
YTH1YPR107C IPT1P38954 527 aa3.31□□□□□ -1.88
YTH1YPR107C YGR017WP53210 297 aa3.31□□□□□ -1.88
YTH1YPR107C YDR278CQ05612 105 aa3.31□□□□□ -1.88
YTH1YPR107C RPS1BP23248 255 aaKnown RBP3.3□□□□□ -1.88
YTH1YPR107C YCL001W-AP87012 153 aa3.3□□□□□ -1.88
YTH1YPR107C GPI11Q06636 219 aa3.3□□□□□ -1.88
YTH1YPR107C RAF1Q06891 181 aa3.3□□□□□ -1.88
YTH1YPR107C VAM10Q08474 114 aa3.3□□□□□ -1.88
YTH1YPR107C HUT1Q12520 339 aa3.3□□□□□ -1.88
YTH1YPR107C HYP2P23301 157 aaKnown RBP3.29□□□□□ -1.88
YTH1YPR107C PRS3P38689 320 aaKnown RBP3.29□□□□□ -1.88
YTH1YPR107C COX5BP00425 151 aa3.28□□□□□ -1.88
YTH1YPR107C NHP6AP11632 93 aaKnown RBP3.28□□□□□ -1.88
YTH1YPR107C RPL14AP36105 138 aaKnown RBP3.28□□□□□ -1.88
YTH1YPR107C RPL14BP38754 138 aaKnown RBP3.28□□□□□ -1.88
YTH1YPR107C DYN2Q02647 92 aa3.28□□□□□ -1.88
YTH1YPR107C SOM1Q05676 74 aa3.28□□□□□ -1.88
YTH1YPR107C CNL1Q06333 122 aa3.28□□□□□ -1.88
YTH1YPR107C FYV5P25585 152 aa3.27□□□□□ -1.89
YTH1YPR107C RPS20P38701 121 aaKnown RBP3.27□□□□□ -1.89
YTH1YPR107C HPM1P40481 377 aa3.27□□□□□ -1.89
YTH1YPR107C YNL277W-AQ3E7Z0 62 aa3.27□□□□□ -1.89
YTH1YPR107C DDP1Q99321 188 aaKnown RBP3.27□□□□□ -1.89
YTH1YPR107C FMP49A0A023PZB3 126 aa3.26□□□□□ -1.89
YTH1YPR107C YHL037CP38733 133 aa3.26□□□□□ -1.89
YTH1YPR107C ELC1Q03071 99 aa3.26□□□□□ -1.89
YTH1YPR107C YMR007WQ03675 126 aa3.26□□□□□ -1.89
YTH1YPR107C YFL051CP43552 160 aa3.25□□□□□ -1.89
YTH1YPR107C DCV1P43595 202 aa3.25□□□□□ -1.89
YTH1YPR107C CDC39P25655 2108 aaKnown RBP3.25□□□□□ -1.89
YTH1YPR107C YBR027CP38220 110 aa3.24□□□□□ -1.89
YTH1YPR107C TIM8P57744 87 aa3.24□□□□□ -1.89
YTH1YPR107C YOR385WQ08909 290 aa3.24□□□□□ -1.89
YTH1YPR107C NAT5Q08689 176 aa3.22□□□□□ -1.89
YTH1YPR107C MRPL44P19956 98 aa3.21□□□□□ -1.9
YTH1YPR107C RPS1AP33442 255 aaKnown RBP3.21□□□□□ -1.9
YTH1YPR107C NKP2Q06162 153 aa3.21□□□□□ -1.9
YTH1YPR107C MHF1Q3E835 90 aa3.21□□□□□ -1.9
YTH1YPR107C YCR050CP25630 102 aa3.2□□□□□ -1.9
YTH1YPR107C HYM1P32464 399 aa3.2□□□□□ -1.9
YTH1YPR107C TMA23Q03525 211 aa3.19□□□□□ -1.9
YTH1YPR107C Q0144Q9ZZW2 109 aa3.19□□□□□ -1.9
YTH1YPR107C ATG8P38182 117 aaRIP-Chip data3.18□□□□□ -1.9not detected
YTH1YPR107C TVP18Q04767 167 aa3.18□□□□□ -1.9
YTH1YPR107C RAD50P12753 1312 aa3.18□□□□□ -1.9
YTH1YPR107C PHS1P40857 217 aa3.16□□□□□ -1.9
YTH1YPR107C MPC1P53157 130 aaKnown RBP3.16□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms