RNA–Protein interactions for RNA: YPR103W

PRE2, Transcript of Beta 5 subunit of the 20S proteasome, yeastyeast

Gene PRE2, Length 864 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE2YPR103W DAD4P69851 72 aa2.6□□□□□ -1.99
PRE2YPR103W DIG2Q03373 323 aaKnown RBP2.6□□□□□ -1.99
PRE2YPR103W GPI17Q04080 534 aa2.6□□□□□ -1.99
PRE2YPR103W SPC2Q04969 178 aa2.6□□□□□ -1.99
PRE2YPR103W YHR007C-AQ07074 71 aa2.6□□□□□ -1.99
PRE2YPR103W YLR422WQ06409 1932 aa2.6□□□□□ -1.99
PRE2YPR103W NSP1P14907 823 aaKnown RBP2.59□□□□□ -1.99
PRE2YPR103W HSP30P25619 332 aa2.59□□□□□ -1.99
PRE2YPR103W NSG1P38837 291 aa2.59□□□□□ -1.99
PRE2YPR103W CUP9P41817 306 aa2.59□□□□□ -1.99
PRE2YPR103W VMA10P48836 114 aaKnown RBP2.59□□□□□ -1.99
PRE2YPR103W YKR005CQ02203 525 aa2.59□□□□□ -1.99
PRE2YPR103W PRP11Q07350 266 aaPredicted RBP2.59□□□□□ -1.99
PRE2YPR103W YPR013CQ12145 317 aa2.59□□□□□ -1.99
PRE2YPR103W DGK1Q12382 290 aa2.59□□□□□ -1.99
PRE2YPR103W YLR412C-AQ3E742 68 aa2.59□□□□□ -1.99
PRE2YPR103W YNL146C-AQ3E7Z1 64 aa2.59□□□□□ -1.99
PRE2YPR103W RPL35AP0CX84 120 aaKnown RBP2.58□□□□□ -2
PRE2YPR103W RPL35BP0CX85 120 aaKnown RBP2.58□□□□□ -2
PRE2YPR103W IDP1P21954 428 aaKnown RBP2.58□□□□□ -2
PRE2YPR103W TRR1P29509 319 aaKnown RBP2.58□□□□□ -2
PRE2YPR103W EDC3P39998 551 aaKnown RBP2.58□□□□□ -2
PRE2YPR103W YER137CP40083 148 aaKnown RBP2.58□□□□□ -2
PRE2YPR103W FLX1P40464 311 aa2.58□□□□□ -2
PRE2YPR103W YLR460CP54007 376 aa2.58□□□□□ -2
PRE2YPR103W FIT2Q08906 153 aa2.58□□□□□ -2
PRE2YPR103W TEL1P38110 2787 aa2.57□□□□□ -2
PRE2YPR103W COX8P04039 78 aa2.57□□□□□ -2
PRE2YPR103W SOL1P50278 321 aa2.57□□□□□ -2
PRE2YPR103W UBC7Q02159 165 aa2.57□□□□□ -2
PRE2YPR103W SPC24Q04477 213 aa2.57□□□□□ -2
PRE2YPR103W YPD1Q07688 167 aa2.57□□□□□ -2
PRE2YPR103W DAS2Q12084 232 aa2.57□□□□□ -2
PRE2YPR103W MAK31P23059 88 aa2.56□□□□□ -2
PRE2YPR103W PEX34P25584 144 aa2.56□□□□□ -2
PRE2YPR103W BUD23P25627 275 aaPredicted RBP2.56□□□□□ -2
PRE2YPR103W YAE1P47118 141 aaPredicted RBP2.56□□□□□ -2
PRE2YPR103W THG1P53215 237 aaKnown RBP2.56□□□□□ -2
PRE2YPR103W ATP20Q12233 115 aa2.56□□□□□ -2
PRE2YPR103W FAS1P07149 2051 aaKnown RBP2.56□□□□□ -2
PRE2YPR103W HAP2P06774 265 aa2.55□□□□□ -2
PRE2YPR103W YBL010CP32788 280 aa2.55□□□□□ -2
PRE2YPR103W SRP14P38985 146 aa2.55□□□□□ -2
PRE2YPR103W CIN5P40917 295 aa2.55□□□□□ -2
PRE2YPR103W PST2Q12335 198 aaKnown RBP2.55□□□□□ -2
PRE2YPR103W RTR2Q12378 196 aa2.55□□□□□ -2
PRE2YPR103W CMC2Q3E7A4 109 aa2.55□□□□□ -2
PRE2YPR103W IRA2P19158 3079 aa2.54□□□□□ -2
PRE2YPR103W FES1P38260 290 aa2.54□□□□□ -2
PRE2YPR103W YNL140CP53910 189 aa2.54□□□□□ -2
PRE2YPR103W HPT1Q04178 221 aaKnown RBP2.54□□□□□ -2
PRE2YPR103W LAA1P39526 2014 aa2.53□□□□□ -2
PRE2YPR103W GIM4P40005 111 aaKnown RBP2.53□□□□□ -2
PRE2YPR103W NSA2P40078 261 aaKnown RBP2.53□□□□□ -2
PRE2YPR103W RFC2P40348 353 aa2.53□□□□□ -2
PRE2YPR103W HPM1P40481 377 aa2.53□□□□□ -2
PRE2YPR103W HYR1P40581 163 aaKnown RBP2.53□□□□□ -2
PRE2YPR103W GIM5Q04493 163 aa2.53□□□□□ -2
PRE2YPR103W GAL83Q04739 417 aa2.53□□□□□ -2
PRE2YPR103W AQY2P0CD90 149 aa2.52□□□□□ -2.01
PRE2YPR103W YNL200CP40165 246 aaKnown RBP2.52□□□□□ -2.01
PRE2YPR103W LSM1P47017 172 aaKnown RBP2.52□□□□□ -2.01
PRE2YPR103W SBH1P52870 82 aa2.52□□□□□ -2.01
PRE2YPR103W COA4Q05809 96 aa2.52□□□□□ -2.01
PRE2YPR103W UIP4Q08926 304 aa2.52□□□□□ -2.01
PRE2YPR103W OCA6Q12454 224 aa2.52□□□□□ -2.01
PRE2YPR103W YCR101CP25607 182 aa2.51□□□□□ -2.01
PRE2YPR103W FYV4P38783 130 aaPredicted RBP2.51□□□□□ -2.01
PRE2YPR103W HPA3P39979 161 aa2.51□□□□□ -2.01
PRE2YPR103W CWC27Q02770 301 aa2.51□□□□□ -2.01
PRE2YPR103W RCE1Q03530 315 aa2.51□□□□□ -2.01
PRE2YPR103W YMR252CQ04814 134 aa2.51□□□□□ -2.01
PRE2YPR103W PEX11Q12462 236 aa2.51□□□□□ -2.01
PRE2YPR103W FMP27Q06179 2628 aa2.51□□□□□ -2.01
PRE2YPR103W CMD1P06787 147 aaKnown RBP2.5□□□□□ -2.01
PRE2YPR103W YGL041W-AP0C5N3 154 aa2.5□□□□□ -2.01
PRE2YPR103W ECM31P38122 312 aa2.5□□□□□ -2.01
PRE2YPR103W RRT1P38192 103 aa2.5□□□□□ -2.01
PRE2YPR103W YHL042WP38729 150 aa2.5□□□□□ -2.01
PRE2YPR103W LSM8P47093 109 aaKnown RBP2.5□□□□□ -2.01
PRE2YPR103W YCL001W-BQ96VH2 84 aa2.5□□□□□ -2.01
PRE2YPR103W ACC1Q00955 2233 aaKnown RBP2.49□□□□□ -2.01
PRE2YPR103W STF2P16965 84 aa2.49□□□□□ -2.01
PRE2YPR103W STP22P25604 385 aa2.49□□□□□ -2.01
PRE2YPR103W SOK1P40317 901 aa2.49□□□□□ -2.01
PRE2YPR103W YFL065CP43539 102 aa2.49□□□□□ -2.01
PRE2YPR103W TTI2P47168 421 aa2.49□□□□□ -2.01
PRE2YPR103W CCC1P47818 322 aa2.49□□□□□ -2.01
PRE2YPR103W YLR050CQ12155 161 aaKnown RBP2.49□□□□□ -2.01
PRE2YPR103W KIN28P06242 306 aa2.48□□□□□ -2.01
PRE2YPR103W GSP2P32836 220 aaKnown RBP2.48□□□□□ -2.01
PRE2YPR103W SUI1P32911 108 aaKnown RBP2.48□□□□□ -2.01
PRE2YPR103W SFK1P35735 353 aa2.48□□□□□ -2.01
PRE2YPR103W YEL008WP40001 126 aa2.48□□□□□ -2.01
PRE2YPR103W YGR042WP53227 271 aa2.48□□□□□ -2.01
PRE2YPR103W RCF2P53721 224 aa2.48□□□□□ -2.01
PRE2YPR103W NHP10Q03435 203 aa2.48□□□□□ -2.01
PRE2YPR103W IRA1P18963 3092 aa2.47□□□□□ -2.01
PRE2YPR103W RPB7P34087 171 aa2.47□□□□□ -2.01
PRE2YPR103W SRX1P36077 127 aa2.47□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 44 ms