RNA–Protein interactions for RNA: YPL178W

CBC2, Transcript of Small subunit of the heterodimeric cap binding complex with Sto1p, yeast

Gene CBC2, Length 627 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CBC2	YPL178W	YDL242W	Q07746	117 aa		4.2	□□□□□ -1.74
CBC2	YPL178W	USV1	Q12132	391 aa		4.2	□□□□□ -1.74
CBC2	YPL178W	CDC7	P06243	507 aa		4.19	□□□□□ -1.74
CBC2	YPL178W	YCR025C	P25352	136 aa		4.19	□□□□□ -1.74
CBC2	YPL178W	YCR022C	P25620	114 aa		4.19	□□□□□ -1.74
CBC2	YPL178W	ALK2	P32789	676 aa	Predicted RBP	4.19	□□□□□ -1.74
CBC2	YPL178W	SHB17	P36136	271 aa	Known RBP	4.19	□□□□□ -1.74
CBC2	YPL178W	YBR013C	P38215	129 aa		4.19	□□□□□ -1.74
CBC2	YPL178W	YGR269W	P40326	108 aa		4.19	□□□□□ -1.74
CBC2	YPL178W	YIL024C	P40543	189 aa		4.19	□□□□□ -1.74
CBC2	YPL178W	MRPL49	P40858	161 aa	Predicted RBP	4.19	□□□□□ -1.74
CBC2	YPL178W	SAS2	P40963	338 aa		4.19	□□□□□ -1.74
CBC2	YPL178W	YGR018C	P53211	109 aa		4.19	□□□□□ -1.74
CBC2	YPL178W	SHH3	Q04487	196 aa		4.19	□□□□□ -1.74
CBC2	YPL178W	ARR3	Q06598	404 aa		4.19	□□□□□ -1.74
CBC2	YPL178W	TIM18	Q08749	192 aa		4.19	□□□□□ -1.74
CBC2	YPL178W	POM34	Q12445	299 aa		4.19	□□□□□ -1.74
CBC2	YPL178W	LAS17	Q12446	633 aa		4.19	□□□□□ -1.74
CBC2	YPL178W	ERG27	Q12452	347 aa	Known RBP	4.19	□□□□□ -1.74
CBC2	YPL178W	TMA17	Q12513	150 aa		4.19	□□□□□ -1.74
CBC2	YPL178W	PCC1	Q3E833	88 aa		4.19	□□□□□ -1.74
CBC2	YPL178W	ELO2	P25358	347 aa		4.18	□□□□□ -1.74
CBC2	YPL178W	COQ3	P27680	312 aa		4.18	□□□□□ -1.74
CBC2	YPL178W	EMC5	P40540	141 aa		4.18	□□□□□ -1.74
CBC2	YPL178W	GLC8	P41818	229 aa		4.18	□□□□□ -1.74
CBC2	YPL178W	NSE4	P43124	402 aa		4.18	□□□□□ -1.74
CBC2	YPL178W	RIB4	P50861	169 aa	Predicted RBP	4.18	□□□□□ -1.74
CBC2	YPL178W	MSC3	Q05812	728 aa		4.18	□□□□□ -1.74
CBC2	YPL178W	CTR3	Q06686	241 aa		4.18	□□□□□ -1.74
CBC2	YPL178W	LDS2	Q08218	356 aa		4.18	□□□□□ -1.74
CBC2	YPL178W	YMR316C-A	I2HB70	103 aa		4.17	□□□□□ -1.74
CBC2	YPL178W	ATP5	P09457	212 aa		4.17	□□□□□ -1.74
CBC2	YPL178W	FUN14	P18411	198 aa		4.17	□□□□□ -1.74
CBC2	YPL178W	SPO13	P23624	291 aa		4.17	□□□□□ -1.74
CBC2	YPL178W	POP5	P28005	173 aa		4.17	□□□□□ -1.74
CBC2	YPL178W	YPT53	P36019	220 aa		4.17	□□□□□ -1.74
CBC2	YPL178W	DER1	P38307	211 aa		4.17	□□□□□ -1.74
CBC2	YPL178W	MPC2	P38857	129 aa		4.17	□□□□□ -1.74
CBC2	YPL178W	SNF11	P38956	169 aa		4.17	□□□□□ -1.74
CBC2	YPL178W	YNR071C	P53757	342 aa		4.17	□□□□□ -1.74
CBC2	YPL178W	UBC7	Q02159	165 aa		4.17	□□□□□ -1.74
CBC2	YPL178W	ATC1	Q04005	294 aa		4.17	□□□□□ -1.74
CBC2	YPL178W	YDL085C-A	Q3E7B7	68 aa	Known RBP	4.17	□□□□□ -1.74
CBC2	YPL178W	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.16	□□□□□ -1.74
CBC2	YPL178W	TY1A-DR6	P0CX70	440 aa		4.16	□□□□□ -1.74
CBC2	YPL178W	TY1A-ER1	P0CX71	440 aa		4.16	□□□□□ -1.74
CBC2	YPL178W	TY1A-LR2	P0CX72	440 aa		4.16	□□□□□ -1.74
CBC2	YPL178W	TY1A-PL	P0CX73	440 aa		4.16	□□□□□ -1.74
CBC2	YPL178W	TY1A-JR1	P0CX74	440 aa		4.16	□□□□□ -1.74
CBC2	YPL178W	TY1A-LR3	P0CX75	440 aa		4.16	□□□□□ -1.74
CBC2	YPL178W	TY1A-ML2	P0CX76	440 aa		4.16	□□□□□ -1.74
CBC2	YPL178W	CPR1	P14832	162 aa	Known RBP	4.16	□□□□□ -1.74
CBC2	YPL178W	ERS1	P17261	260 aa		4.16	□□□□□ -1.74
CBC2	YPL178W	ZRC1	P20107	442 aa		4.16	□□□□□ -1.74
CBC2	YPL178W	AHT1	P29589	182 aa		4.16	□□□□□ -1.74
CBC2	YPL178W	EMP24	P32803	203 aa	Known RBP	4.16	□□□□□ -1.74
CBC2	YPL178W	YBL059W	P34224	193 aa		4.16	□□□□□ -1.74
CBC2	YPL178W	SFT2	P38166	215 aa		4.16	□□□□□ -1.74
CBC2	YPL178W	SNU13	P39990	126 aa	Known RBP	4.16	□□□□□ -1.74
CBC2	YPL178W	YER085C	P40058	173 aa		4.16	□□□□□ -1.74
CBC2	YPL178W	ATG27	P46989	271 aa		4.16	□□□□□ -1.74
CBC2	YPL178W	PHO23	P50947	330 aa		4.16	□□□□□ -1.74
CBC2	YPL178W	DUO1	P53168	247 aa	Known RBP	4.16	□□□□□ -1.74
CBC2	YPL178W	CAX4	P53223	239 aa		4.16	□□□□□ -1.74
CBC2	YPL178W	HST4	P53688	370 aa		4.16	□□□□□ -1.74
CBC2	YPL178W	YMR007W	Q03675	126 aa		4.16	□□□□□ -1.74
CBC2	YPL178W	TRI1	Q05024	226 aa		4.16	□□□□□ -1.74
CBC2	YPL178W	TY1A-GR1	Q12085	440 aa		4.16	□□□□□ -1.74
CBC2	YPL178W	YOR015W	Q12169	119 aa		4.16	□□□□□ -1.74
CBC2	YPL178W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.16	□□□□□ -1.74
CBC2	YPL178W	TY1A-OL	Q92392	440 aa	Known RBP	4.16	□□□□□ -1.74
CBC2	YPL178W	DDI2	P0CH63	225 aa		4.15	□□□□□ -1.75
CBC2	YPL178W	DDI3	P0CH64	225 aa		4.15	□□□□□ -1.75
CBC2	YPL178W	HSP12	P22943	109 aa	Known RBP	4.15	□□□□□ -1.75
CBC2	YPL178W	PRE9	P23638	258 aa	Known RBP	4.15	□□□□□ -1.75
CBC2	YPL178W	CMC1	P36064	111 aa		4.15	□□□□□ -1.75
CBC2	YPL178W	SDH4	P37298	181 aa		4.15	□□□□□ -1.75
CBC2	YPL178W	ECM33	P38248	429 aa	Known RBP	4.15	□□□□□ -1.75
CBC2	YPL178W	RPF1	P38805	295 aa	Known RBP	4.15	□□□□□ -1.75
CBC2	YPL178W	SPC25	P40014	221 aa		4.15	□□□□□ -1.75
CBC2	YPL178W	SMD3	P43321	101 aa	Known RBP	4.15	□□□□□ -1.75
CBC2	YPL178W	YJL027C	P47063	138 aa	Predicted RBP	4.15	□□□□□ -1.75
CBC2	YPL178W	ALG13	P53178	202 aa		4.15	□□□□□ -1.75
CBC2	YPL178W	YDR366C	P87287	132 aa		4.15	□□□□□ -1.75
CBC2	YPL178W	ADD37	Q03233	198 aa		4.15	□□□□□ -1.75
CBC2	YPL178W	VPS71	Q03433	280 aa		4.15	□□□□□ -1.75
CBC2	YPL178W	ATG39	Q06159	398 aa		4.15	□□□□□ -1.75
CBC2	YPL178W	IZH3	Q07959	543 aa		4.15	□□□□□ -1.75
CBC2	YPL178W	COA6	Q3E846	104 aa		4.15	□□□□□ -1.75
CBC2	YPL178W	RPL27A	P0C2H6	136 aa	Known RBP	4.14	□□□□□ -1.75
CBC2	YPL178W	RPL27B	P0C2H7	136 aa	Known RBP	4.14	□□□□□ -1.75
CBC2	YPL178W	YHR213W	P0CI67	198 aa		4.14	□□□□□ -1.75
CBC2	YPL178W	RPS2	P25443	254 aa	Known RBP	4.14	□□□□□ -1.75
CBC2	YPL178W	TIR2	P33890	251 aa		4.14	□□□□□ -1.75
CBC2	YPL178W	GET2	P40056	285 aa		4.14	□□□□□ -1.75
CBC2	YPL178W	TMA23	Q03525	211 aa		4.14	□□□□□ -1.75
CBC2	YPL178W	CUE4	Q04201	117 aa	Predicted RBP	4.14	□□□□□ -1.75
CBC2	YPL178W	GRH1	Q04410	372 aa	Known RBP	4.14	□□□□□ -1.75
CBC2	YPL178W	AVO2	Q04749	426 aa		4.14	□□□□□ -1.75
CBC2	YPL178W	AYT1	Q12226	474 aa		4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 44.7 ms