RNA–Protein interactions for RNA: YOR217W

RFC1, Transcript of Subunit of heteropentameric Replication factor C (RF-C), yeast

Gene RFC1, Length 2,586 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RFC1	YOR217W	SPL2	P38839	148 aa		7.16	□□□□□ -1.26
RFC1	YOR217W	YND1	P40009	630 aa		7.16	□□□□□ -1.26
RFC1	YOR217W	SWM2	P40342	146 aa		7.16	□□□□□ -1.26
RFC1	YOR217W	EMC5	P40540	141 aa		7.16	□□□□□ -1.26
RFC1	YOR217W	SCS22	Q6Q595	175 aa		7.16	□□□□□ -1.26
RFC1	YOR217W	MED6	P38782	295 aa		7.15	□□□□□ -1.26
RFC1	YOR217W	YNL046W	P53956	172 aa		7.15	□□□□□ -1.26
RFC1	YOR217W	SMD1	Q02260	146 aa	Predicted RBP	7.15	□□□□□ -1.26
RFC1	YOR217W	AIR2	Q12476	344 aa	Known RBP	7.15	□□□□□ -1.26
RFC1	YOR217W	MYO1	P08964	1928 aa		7.15	□□□□□ -1.27
RFC1	YOR217W	POR1	P04840	283 aa	Known RBP	7.14	□□□□□ -1.27
RFC1	YOR217W	YAR066W	P0CX18	203 aa		7.14	□□□□□ -1.27
RFC1	YOR217W	YHR214W	P0CX19	203 aa		7.14	□□□□□ -1.27
RFC1	YOR217W	SIM1	P40472	476 aa		7.14	□□□□□ -1.27
RFC1	YOR217W	GPI2	P46961	280 aa		7.14	□□□□□ -1.27
RFC1	YOR217W	YLR012C	Q07927	99 aa		7.14	□□□□□ -1.27
RFC1	YOR217W	TIM18	Q08749	192 aa		7.14	□□□□□ -1.27
RFC1	YOR217W	DFM1	Q12743	341 aa	Known RBP	7.14	□□□□□ -1.27
RFC1	YOR217W	MIC10	Q96VH5	97 aa		7.14	□□□□□ -1.27
RFC1	YOR217W	HEM2	P05373	342 aa		7.14	□□□□□ -1.27
RFC1	YOR217W	MID2	P36027	376 aa		7.14	□□□□□ -1.27
RFC1	YOR217W	YNL234W	P53857	426 aa		7.14	□□□□□ -1.27
RFC1	YOR217W	YBR255C-A	Q3E776	120 aa		7.14	□□□□□ -1.27
RFC1	YOR217W	MTR2	P34232	184 aa	Known RBP	7.13	□□□□□ -1.27
RFC1	YOR217W	YGR050C	P53231	118 aa		7.13	□□□□□ -1.27
RFC1	YOR217W	MAK31	P23059	88 aa		7.13	□□□□□ -1.27
RFC1	YOR217W	ENV10	Q99382	181 aa		7.13	□□□□□ -1.27
RFC1	YOR217W	HTA2	P04912	132 aa		7.12	□□□□□ -1.27
RFC1	YOR217W	CNE1	P27825	502 aa		7.12	□□□□□ -1.27
RFC1	YOR217W	CAX4	P53223	239 aa		7.12	□□□□□ -1.27
RFC1	YOR217W	HKR1	P41809	1802 aa		7.12	□□□□□ -1.27
RFC1	YOR217W	RAD6	P06104	172 aa		7.12	□□□□□ -1.27
RFC1	YOR217W	GGC1	P38988	300 aa		7.12	□□□□□ -1.27
RFC1	YOR217W	WWM1	P43582	211 aa	Known RBP	7.12	□□□□□ -1.27
RFC1	YOR217W	PHS1	P40857	217 aa		7.11	□□□□□ -1.27
RFC1	YOR217W	JJJ3	P47138	172 aa		7.11	□□□□□ -1.27
RFC1	YOR217W	YNR064C	P53750	290 aa		7.11	□□□□□ -1.27
RFC1	YOR217W	AVO2	Q04749	426 aa		7.11	□□□□□ -1.27
RFC1	YOR217W	YDR119W-A	Q2V2P9	66 aa		7.11	□□□□□ -1.27
RFC1	YOR217W	NDD1	Q08887	554 aa		7.11	□□□□□ -1.27
RFC1	YOR217W	APS1	P35181	156 aa		7.1	□□□□□ -1.27
RFC1	YOR217W	EST3	Q03096	181 aa		7.1	□□□□□ -1.27
RFC1	YOR217W	FIT1	Q04433	528 aa		7.1	□□□□□ -1.27
RFC1	YOR217W	ANT1	Q06497	328 aa		7.1	□□□□□ -1.27
RFC1	YOR217W	CYC1	P00044	109 aa	Predicted RBP	7.1	□□□□□ -1.27
RFC1	YOR217W	HTA1	P04911	132 aa	Known RBP	7.1	□□□□□ -1.27
RFC1	YOR217W	PEX2	P32800	271 aa		7.1	□□□□□ -1.27
RFC1	YOR217W	SPG4	Q04438	115 aa		7.1	□□□□□ -1.27
RFC1	YOR217W	ATG40	Q99325	256 aa		7.1	□□□□□ -1.27
RFC1	YOR217W	RPL15A	P05748	204 aa	Known RBP	7.09	□□□□□ -1.27
RFC1	YOR217W	RPL15B	P54780	204 aa	Predicted RBP	7.09	□□□□□ -1.27
RFC1	YOR217W	NSA2	P40078	261 aa	Known RBP	7.09	□□□□□ -1.28
RFC1	YOR217W	YDR042C	Q03205	200 aa		7.09	□□□□□ -1.28
RFC1	YOR217W	SLH1	P53327	1967 aa	Known RBP	7.08	□□□□□ -1.28
RFC1	YOR217W	RPL32	P38061	130 aa	Known RBP	7.08	□□□□□ -1.28
RFC1	YOR217W	ALG9	P53868	555 aa	Known RBP	7.08	□□□□□ -1.28
RFC1	YOR217W	YMR090W	Q04304	227 aa	Known RBP	7.08	□□□□□ -1.28
RFC1	YOR217W	CUZ1	P53899	274 aa		7.08	□□□□□ -1.28
RFC1	YOR217W	SDS23	P53172	527 aa		7.07	□□□□□ -1.28
RFC1	YOR217W	TIM9	O74700	87 aa		7.07	□□□□□ -1.28
RFC1	YOR217W	MRP10	O75012	95 aa		7.07	□□□□□ -1.28
RFC1	YOR217W	ARF1	P11076	181 aa	Known RBP	7.07	□□□□□ -1.28
RFC1	YOR217W	GPI18	P38211	433 aa		7.07	□□□□□ -1.28
RFC1	YOR217W	GCV3	P39726	170 aa	Predicted RBP	7.07	□□□□□ -1.28
RFC1	YOR217W	YGL088W	P53151	121 aa		7.07	□□□□□ -1.28
RFC1	YOR217W	TSC3	Q3E790	80 aa		7.07	□□□□□ -1.28
RFC1	YOR217W	RPL40A	P0CH08	128 aa	Known RBP	7.06	□□□□□ -1.28
RFC1	YOR217W	RPL40B	P0CH09	128 aa	Known RBP	7.06	□□□□□ -1.28
RFC1	YOR217W	PHO88	P38264	188 aa	Predicted RBP	7.06	□□□□□ -1.28
RFC1	YOR217W	ANS1	P38832	159 aa		7.06	□□□□□ -1.28
RFC1	YOR217W	KEG1	P43614	200 aa		7.06	□□□□□ -1.28
RFC1	YOR217W	MSB2	P32334	1306 aa		7.06	□□□□□ -1.28
RFC1	YOR217W	RPA12	P32529	125 aa	Known RBP	7.06	□□□□□ -1.28
RFC1	YOR217W	SDH3	P33421	198 aa		7.06	□□□□□ -1.28
RFC1	YOR217W	ADD37	Q03233	198 aa		7.06	□□□□□ -1.28
RFC1	YOR217W	YOR186W	Q08560	144 aa		7.06	□□□□□ -1.28
RFC1	YOR217W	YCL021W-A	Q96VH3	125 aa		7.06	□□□□□ -1.28
RFC1	YOR217W	POP8	P38208	133 aa		7.05	□□□□□ -1.28
RFC1	YOR217W	PAU15	P40585	124 aa		7.05	□□□□□ -1.28
RFC1	YOR217W	UBC4	P15731	148 aa		7.05	□□□□□ -1.28
RFC1	YOR217W	OST1	P41543	476 aa	Known RBP	7.05	□□□□□ -1.28
RFC1	YOR217W	SUS1	Q6WNK7	96 aa		7.05	□□□□□ -1.28
RFC1	YOR217W	RPS13	P05756	151 aa	Known RBP	7.04	□□□□□ -1.28
RFC1	YOR217W	AHT1	P29589	182 aa		7.04	□□□□□ -1.28
RFC1	YOR217W	AHP1	P38013	176 aa	Known RBP	7.04	□□□□□ -1.28
RFC1	YOR217W	YBR292C	P38357	123 aa		7.04	□□□□□ -1.28
RFC1	YOR217W	YOR268C	Q08734	132 aa		7.04	□□□□□ -1.28
RFC1	YOR217W	RPL16A	P26784	199 aa	Known RBP	7.04	□□□□□ -1.28
RFC1	YOR217W	SFT2	P38166	215 aa		7.03	□□□□□ -1.28
RFC1	YOR217W	YHL018W	P38744	120 aa	Predicted RBP	7.03	□□□□□ -1.28
RFC1	YOR217W	YAL064W	P39711	94 aa		7.03	□□□□□ -1.28
RFC1	YOR217W	BNS1	P50084	137 aa		7.03	□□□□□ -1.28
RFC1	YOR217W	YDL057W	Q07379	328 aa		7.03	□□□□□ -1.28
RFC1	YOR217W	YDL211C	Q12121	372 aa		7.03	□□□□□ -1.28
RFC1	YOR217W	YLR112W	Q12130	139 aa		7.03	□□□□□ -1.28
RFC1	YOR217W	RPL16B	P26785	198 aa	Known RBP	7.03	□□□□□ -1.28
RFC1	YOR217W	DSS4	P32601	143 aa		7.03	□□□□□ -1.28
RFC1	YOR217W	PET8	P38921	284 aa		7.03	□□□□□ -1.28
RFC1	YOR217W	ASP1	P38986	381 aa	Predicted RBP	7.03	□□□□□ -1.28
RFC1	YOR217W	ERG4	P25340	473 aa		7.02	□□□□□ -1.29

Retrieved 100 of 5,963 RNA–protein pairs in 29.9 ms