RNA–Protein interactions for RNA: YOR054C

VHS3, Transcript of Negative regulatory subunit of protein phosphatase 1 Ppz1p, yeastyeast

Gene VHS3, Length 2,025 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VHS3YOR054C RPS14AP06367 137 aaKnown RBP3.46□□□□□ -1.86
VHS3YOR054C RPL27AP0C2H6 136 aaKnown RBP3.46□□□□□ -1.86
VHS3YOR054C RPL27BP0C2H7 136 aaKnown RBP3.46□□□□□ -1.86
VHS3YOR054C YER039C-AP0CD97 72 aa3.46□□□□□ -1.86
VHS3YOR054C NHP2P32495 156 aaPredicted RBP3.46□□□□□ -1.86
VHS3YOR054C YBL059WP34224 193 aa3.46□□□□□ -1.86
VHS3YOR054C RPS14BP39516 138 aaKnown RBP3.46□□□□□ -1.86
VHS3YOR054C CYB5P40312 120 aa3.46□□□□□ -1.86
VHS3YOR054C YGR269WP40326 108 aa3.46□□□□□ -1.86
VHS3YOR054C ATF1P40353 525 aa3.46□□□□□ -1.86
VHS3YOR054C YFR020WP43600 232 aa3.46□□□□□ -1.86
VHS3YOR054C YNR071CP53757 342 aa3.46□□□□□ -1.86
VHS3YOR054C MOT3P54785 490 aaKnown RBP3.46□□□□□ -1.86
VHS3YOR054C MRPL51Q06090 140 aaPredicted RBP3.46□□□□□ -1.86
VHS3YOR054C AYT1Q12226 474 aa3.46□□□□□ -1.86
VHS3YOR054C CWP2P43497 92 aa3.46□□□□□ -1.86
VHS3YOR054C BRP1P53194 125 aa3.46□□□□□ -1.86
VHS3YOR054C CPD1P53314 239 aa3.46□□□□□ -1.86
VHS3YOR054C PIR1Q03178 341 aa3.46□□□□□ -1.86
VHS3YOR054C USV1Q12132 391 aa3.46□□□□□ -1.86
VHS3YOR054C YKL023C-AQ2V2P3 75 aa3.46□□□□□ -1.86
VHS3YOR054C OPI3P05375 206 aa3.45□□□□□ -1.86
VHS3YOR054C YBR121C-AP0C5L4 52 aa3.45□□□□□ -1.86
VHS3YOR054C RPL1AP0CX43 217 aaKnown RBP3.45□□□□□ -1.86
VHS3YOR054C RPL1BP0CX44 217 aaKnown RBP3.45□□□□□ -1.86
VHS3YOR054C QRI5P32344 111 aa3.45□□□□□ -1.86
VHS3YOR054C REC114P32841 428 aa3.45□□□□□ -1.86
VHS3YOR054C PAD1P33751 242 aaKnown RBP RIP-Chip data3.45□□□□□ -1.86not detected
VHS3YOR054C YPT10P38146 199 aa3.45□□□□□ -1.86
VHS3YOR054C ERG28P40030 148 aa3.45□□□□□ -1.86
VHS3YOR054C EGT2P42835 1041 aa3.45□□□□□ -1.86
VHS3YOR054C YIP1P53039 248 aa3.45□□□□□ -1.86
VHS3YOR054C NCE103P53615 221 aa3.45□□□□□ -1.86
VHS3YOR054C MPP6P53725 186 aaPredicted RBP3.45□□□□□ -1.86
VHS3YOR054C PET191Q02772 108 aa3.45□□□□□ -1.86
VHS3YOR054C MRPL1Q04599 285 aa3.45□□□□□ -1.86
VHS3YOR054C YDL218WQ07629 317 aa3.45□□□□□ -1.86
VHS3YOR054C USB1Q12208 290 aaKnown RBP3.45□□□□□ -1.86
VHS3YOR054C YBR182C-AQ8TGU6 64 aa3.45□□□□□ -1.86
VHS3YOR054C PHO85P17157 305 aa3.44□□□□□ -1.86
VHS3YOR054C KRE1P17260 313 aa3.44□□□□□ -1.86
VHS3YOR054C RPB7P34087 171 aa3.44□□□□□ -1.86
VHS3YOR054C YIL059CP40520 121 aa3.44□□□□□ -1.86
VHS3YOR054C YDL186WP48568 277 aa3.44□□□□□ -1.86
VHS3YOR054C SDS23P53172 527 aa3.44□□□□□ -1.86
VHS3YOR054C GEP3Q08622 556 aa3.44□□□□□ -1.86
VHS3YOR054C YOR376WQ08900 122 aa3.44□□□□□ -1.86
VHS3YOR054C YOR387CQ08910 206 aa3.44□□□□□ -1.86
VHS3YOR054C POM34Q12445 299 aa3.44□□□□□ -1.86
VHS3YOR054C PRY1P47032 299 aa3.44□□□□□ -1.86
VHS3YOR054C MIX17Q03667 156 aa3.44□□□□□ -1.86
VHS3YOR054C HUG1Q6Q5K6 68 aa3.44□□□□□ -1.86
VHS3YOR054C RAD6P06104 172 aa3.43□□□□□ -1.86
VHS3YOR054C RPS28BP0C0X0 67 aaKnown RBP3.43□□□□□ -1.86
VHS3YOR054C MSI1P13712 422 aa3.43□□□□□ -1.86
VHS3YOR054C YSR3P23501 404 aa3.43□□□□□ -1.86
VHS3YOR054C VMA11P32842 164 aa3.43□□□□□ -1.86
VHS3YOR054C FRM2P37261 193 aa3.43□□□□□ -1.86
VHS3YOR054C UBS1P38290 277 aa3.43□□□□□ -1.86
VHS3YOR054C MST28P39552 234 aa3.43□□□□□ -1.86
VHS3YOR054C SUN4P53616 420 aa3.43□□□□□ -1.86
VHS3YOR054C HPA2Q06592 156 aa3.43□□□□□ -1.86
VHS3YOR054C MCH4Q08268 501 aa3.43□□□□□ -1.86
VHS3YOR054C YPQ1Q12010 308 aa3.43□□□□□ -1.86
VHS3YOR054C YDL180WQ12301 547 aa3.43□□□□□ -1.86
VHS3YOR054C YBR255C-AQ3E776 120 aa3.43□□□□□ -1.86
VHS3YOR054C RPS28AQ3E7X9 67 aaPredicted RBP3.43□□□□□ -1.86
VHS3YOR054C CDC39P25655 2108 aaKnown RBP3.43□□□□□ -1.86
VHS3YOR054C FLO9P39712 1322 aa3.43□□□□□ -1.86
VHS3YOR054C DIF1O13577 133 aa3.43□□□□□ -1.86
VHS3YOR054C RPL23AP0CX41 137 aaKnown RBP3.43□□□□□ -1.86
VHS3YOR054C RPL23BP0CX42 137 aaKnown RBP3.43□□□□□ -1.86
VHS3YOR054C PRS4P38063 326 aaPredicted RBP3.43□□□□□ -1.86
VHS3YOR054C YJL193WP39542 402 aa3.43□□□□□ -1.86
VHS3YOR054C CCS1P40202 249 aaKnown RBP3.43□□□□□ -1.86
VHS3YOR054C TIF34P40217 347 aaKnown RBP3.43□□□□□ -1.86
VHS3YOR054C DSK2P48510 373 aa3.43□□□□□ -1.86
VHS3YOR054C YLR365WQ7LIF2 110 aa3.43□□□□□ -1.86
VHS3YOR054C UBC5P15732 148 aa3.42□□□□□ -1.86
VHS3YOR054C YMR178WQ03219 274 aaKnown RBP3.42□□□□□ -1.86
VHS3YOR054C AIM34Q03673 198 aa3.42□□□□□ -1.86
VHS3YOR054C YDR215CQ12240 137 aa3.42□□□□□ -1.86
VHS3YOR054C DFM1Q12743 341 aaKnown RBP3.42□□□□□ -1.86
VHS3YOR054C YAL063C-AQ3E791 96 aa3.42□□□□□ -1.86
VHS3YOR054C BRR2P32639 2163 aaKnown RBP3.42□□□□□ -1.86
VHS3YOR054C YMR316C-AI2HB70 103 aa3.41□□□□□ -1.86
VHS3YOR054C ARF2P19146 181 aaKnown RBP3.41□□□□□ -1.86
VHS3YOR054C RPB8P20436 146 aa3.41□□□□□ -1.86
VHS3YOR054C RPA12P32529 125 aaKnown RBP3.41□□□□□ -1.86
VHS3YOR054C SRX1P36077 127 aa3.41□□□□□ -1.86
VHS3YOR054C YKL044WP36092 106 aa3.41□□□□□ -1.86
VHS3YOR054C MED6P38782 295 aa3.41□□□□□ -1.86
VHS3YOR054C GEP7P53171 287 aa3.41□□□□□ -1.86
VHS3YOR054C TPC1P53257 314 aa3.41□□□□□ -1.86
VHS3YOR054C WSC2P53832 503 aa3.41□□□□□ -1.86
VHS3YOR054C FCF1Q05498 189 aaPredicted RBP3.41□□□□□ -1.86
VHS3YOR054C MSA1Q08471 629 aa3.41□□□□□ -1.86
VHS3YOR054C YOR292CQ08743 309 aa3.41□□□□□ -1.86
VHS3YOR054C YRA1Q12159 226 aaKnown RBP3.41□□□□□ -1.86
VHS3YOR054C FCY1Q12178 158 aa3.41□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 109 ms