RNA–Protein interactions for RNA: YOL112W

MSB4, Transcript of GTPase-activating protein of the Ras superfamily, yeast

Gene MSB4, Length 1,479 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSB4	YOL112W	MCM22	P47167	239 aa		7.24	□□□□□ -1.25
MSB4	YOL112W	YIP3	P53633	176 aa		7.24	□□□□□ -1.25
MSB4	YOL112W	RAV2	Q03956	351 aa		7.24	□□□□□ -1.25
MSB4	YOL112W	YLR281C	Q05863	155 aa		7.24	□□□□□ -1.25
MSB4	YOL112W	LOA1	Q06508	300 aa		7.24	□□□□□ -1.25
MSB4	YOL112W	PRE9	P23638	258 aa	Known RBP	7.23	□□□□□ -1.25
MSB4	YOL112W	RNA15	P25299	296 aa	Predicted RBP	7.23	□□□□□ -1.25
MSB4	YOL112W	GET2	P40056	285 aa		7.23	□□□□□ -1.25
MSB4	YOL112W	RPB3	P16370	318 aa	Known RBP	7.22	□□□□□ -1.25
MSB4	YOL112W	NNK1	P36003	928 aa		7.22	□□□□□ -1.25
MSB4	YOL112W	ATX2	Q12067	313 aa		7.22	□□□□□ -1.25
MSB4	YOL112W	YNL146C-A	Q3E7Z1	64 aa		7.22	□□□□□ -1.25
MSB4	YOL112W	Q0142	Q9ZZW4	58 aa		7.22	□□□□□ -1.25
MSB4	YOL112W	HMX1	P32339	317 aa		7.21	□□□□□ -1.26
MSB4	YOL112W	AUA1	P32450	94 aa		7.21	□□□□□ -1.26
MSB4	YOL112W	PHD1	P36093	366 aa		7.21	□□□□□ -1.26
MSB4	YOL112W	YHR173C	P38864	112 aa		7.21	□□□□□ -1.26
MSB4	YOL112W	YIL163C	P40448	117 aa		7.21	□□□□□ -1.26
MSB4	YOL112W	YMR244W	Q04018	355 aa		7.21	□□□□□ -1.26
MSB4	YOL112W	TY1A-DR3	Q12441	440 aa		7.21	□□□□□ -1.26
MSB4	YOL112W	MRS1	P07266	363 aa		7.2	□□□□□ -1.26
MSB4	YOL112W	PRE5	P40302	234 aa	Known RBP	7.2	□□□□□ -1.26
MSB4	YOL112W	GEP3	Q08622	556 aa		7.2	□□□□□ -1.26
MSB4	YOL112W	MDN1	Q12019	4910 aa	Known RBP	7.2	□□□□□ -1.26
MSB4	YOL112W	YER135C	P40082	130 aa		7.19	□□□□□ -1.26
MSB4	YOL112W	YLR302C	O13544	120 aa		7.18	□□□□□ -1.26
MSB4	YOL112W	HTB2	P02294	131 aa		7.18	□□□□□ -1.26
MSB4	YOL112W	NRG2	P38082	220 aa		7.18	□□□□□ -1.26
MSB4	YOL112W	YMR141C	P40211	102 aa		7.18	□□□□□ -1.26
MSB4	YOL112W	YMR253C	Q04835	414 aa		7.18	□□□□□ -1.26
MSB4	YOL112W	YPR145C-A	Q2V2P0	78 aa		7.18	□□□□□ -1.26
MSB4	YOL112W	MIG3	P39943	394 aa		7.17	□□□□□ -1.26
MSB4	YOL112W	SIT1	P39980	628 aa		7.17	□□□□□ -1.26
MSB4	YOL112W	MRPS8	Q03799	155 aa		7.17	□□□□□ -1.26
MSB4	YOL112W	RPS22A	P0C0W1	130 aa	Known RBP	7.17	□□□□□ -1.26
MSB4	YOL112W	LDS1	P31379	325 aa		7.17	□□□□□ -1.26
MSB4	YOL112W	SRB6	P32570	121 aa		7.17	□□□□□ -1.26
MSB4	YOL112W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	7.17	□□□□□ -1.26	not detected
MSB4	YOL112W	COQ3	P27680	312 aa		7.16	□□□□□ -1.26
MSB4	YOL112W	AFR1	P33304	620 aa		7.16	□□□□□ -1.26
MSB4	YOL112W	YBR090C	P38253	122 aa		7.16	□□□□□ -1.26
MSB4	YOL112W	YHR022C	P38763	256 aa		7.16	□□□□□ -1.26
MSB4	YOL112W	ISU1	Q03020	165 aa		7.16	□□□□□ -1.26
MSB4	YOL112W	YPL162C	Q12042	273 aa		7.16	□□□□□ -1.26
MSB4	YOL112W	TY1A-DR4	O74302	440 aa		7.15	□□□□□ -1.27
MSB4	YOL112W	TY1A-A	P0CX57	440 aa		7.15	□□□□□ -1.27
MSB4	YOL112W	TY1A-PR1	P0CX58	440 aa		7.15	□□□□□ -1.27
MSB4	YOL112W	TY1A-OR	P0CX59	440 aa		7.15	□□□□□ -1.27
MSB4	YOL112W	TY1A-PR2	P0CX60	440 aa		7.15	□□□□□ -1.27
MSB4	YOL112W	TY1A-DR5	P0CX65	440 aa		7.15	□□□□□ -1.27
MSB4	YOL112W	TY1A-ER2	P0CX66	440 aa		7.15	□□□□□ -1.27
MSB4	YOL112W	TY1A-GR3	P0CX67	440 aa		7.15	□□□□□ -1.27
MSB4	YOL112W	TY1A-LR1	P0CX68	440 aa		7.15	□□□□□ -1.27
MSB4	YOL112W	TY1A-MR2	P0CX69	440 aa		7.15	□□□□□ -1.27
MSB4	YOL112W	MRPL20	P22354	195 aa	Predicted RBP	7.15	□□□□□ -1.27
MSB4	YOL112W	ECM25	P32525	599 aa		7.15	□□□□□ -1.27
MSB4	YOL112W	HIT1	P46973	164 aa		7.15	□□□□□ -1.27
MSB4	YOL112W	TY1A-JR2	P47099	440 aa		7.15	□□□□□ -1.27
MSB4	YOL112W	TY1A-DR1	Q03856	440 aa		7.15	□□□□□ -1.27
MSB4	YOL112W	TY1A-ML1	Q04706	440 aa	Known RBP	7.15	□□□□□ -1.27
MSB4	YOL112W	TY1A-NL2	Q12470	440 aa		7.15	□□□□□ -1.27
MSB4	YOL112W	TY1A-GR2	Q12485	440 aa		7.15	□□□□□ -1.27
MSB4	YOL112W	YOL085C	Q99345	113 aa		7.15	□□□□□ -1.27
MSB4	YOL112W	MLF3	P32047	452 aa		7.14	□□□□□ -1.27
MSB4	YOL112W	CYB5	P40312	120 aa		7.14	□□□□□ -1.27
MSB4	YOL112W	PHS1	P40857	217 aa		7.14	□□□□□ -1.27
MSB4	YOL112W	YFR035C	P43608	114 aa		7.14	□□□□□ -1.27
MSB4	YOL112W	COX12	Q01519	83 aa		7.14	□□□□□ -1.27
MSB4	YOL112W	SNO1	Q03144	224 aa		7.14	□□□□□ -1.27
MSB4	YOL112W	CCW12	Q12127	133 aa		7.14	□□□□□ -1.27
MSB4	YOL112W	SPI1	P40092	148 aa		7.13	□□□□□ -1.27
MSB4	YOL112W	YIL024C	P40543	189 aa		7.13	□□□□□ -1.27
MSB4	YOL112W	BNS1	P50084	137 aa		7.13	□□□□□ -1.27
MSB4	YOL112W	SCW10	Q04951	389 aa		7.13	□□□□□ -1.27
MSB4	YOL112W	STP4	Q07351	490 aa		7.13	□□□□□ -1.27
MSB4	YOL112W	PCC1	Q3E833	88 aa		7.13	□□□□□ -1.27
MSB4	YOL112W	RPL31B	P0C2H9	113 aa	Known RBP	7.12	□□□□□ -1.27
MSB4	YOL112W	DAD4	P69851	72 aa		7.12	□□□□□ -1.27
MSB4	YOL112W	YPR063C	Q12160	140 aa		7.12	□□□□□ -1.27
MSB4	YOL112W	DUO1	P53168	247 aa	Known RBP	7.11	□□□□□ -1.27
MSB4	YOL112W	YPT10	P38146	199 aa		7.11	□□□□□ -1.27
MSB4	YOL112W	AME1	P38313	324 aa		7.11	□□□□□ -1.27
MSB4	YOL112W	NAT3	Q06504	195 aa		7.11	□□□□□ -1.27
MSB4	YOL112W	RDS3	Q06835	107 aa	Predicted RBP	7.11	□□□□□ -1.27
MSB4	YOL112W	SEC59	P20048	519 aa		7.1	□□□□□ -1.27
MSB4	YOL112W	FZF1	P32805	299 aa		7.1	□□□□□ -1.27
MSB4	YOL112W	ATP19	P81451	68 aa		7.1	□□□□□ -1.27
MSB4	YOL112W	CPT1	P17898	393 aa		7.09	□□□□□ -1.27
MSB4	YOL112W	SRP21	P32342	167 aa		7.09	□□□□□ -1.27
MSB4	YOL112W	SRP14	P38985	146 aa		7.09	□□□□□ -1.27
MSB4	YOL112W	YJR096W	P47137	282 aa		7.09	□□□□□ -1.27
MSB4	YOL112W	DAD3	P69850	94 aa		7.09	□□□□□ -1.27
MSB4	YOL112W	DAD1	Q12248	94 aa		7.09	□□□□□ -1.27
MSB4	YOL112W	LAC1	P28496	418 aa		7.08	□□□□□ -1.28
MSB4	YOL112W	RPS8A	P0CX39	200 aa	Known RBP	7.07	□□□□□ -1.28
MSB4	YOL112W	RPS8B	P0CX40	200 aa	Known RBP	7.07	□□□□□ -1.28
MSB4	YOL112W	NTF2	P33331	125 aa	Known RBP	7.07	□□□□□ -1.28
MSB4	YOL112W	POG1	P40473	351 aa		7.07	□□□□□ -1.28
MSB4	YOL112W	YLR342W-A	Q3E810	57 aa		7.07	□□□□□ -1.28
MSB4	YOL112W	RPL2A	P0CX45	254 aa	Known RBP	7.06	□□□□□ -1.28

Retrieved 100 of 5,963 RNA–protein pairs in 66 ms