RNA–Protein interactions for RNA: YNL223W

ATG4, Transcript of Conserved cysteine protease required for autophagy, yeastyeast

Gene ATG4, Length 1,485 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG4YNL223W RAV2Q03956 351 aa4.72□□□□□ -1.65
ATG4YNL223W RPB9P27999 122 aa4.71□□□□□ -1.66
ATG4YNL223W PRS4P38063 326 aaPredicted RBP4.71□□□□□ -1.66
ATG4YNL223W GET2P40056 285 aa4.71□□□□□ -1.66
ATG4YNL223W APS2Q00381 147 aa4.71□□□□□ -1.66
ATG4YNL223W YPL108WQ02872 168 aaPredicted RBP4.71□□□□□ -1.66
ATG4YNL223W SMT3Q12306 101 aaKnown RBP4.71□□□□□ -1.66
ATG4YNL223W DCN1Q12395 269 aa4.71□□□□□ -1.66
ATG4YNL223W LAS17Q12446 633 aa4.71□□□□□ -1.66
ATG4YNL223W YLR302CO13544 120 aa4.7□□□□□ -1.66
ATG4YNL223W CYC3P06182 269 aa4.7□□□□□ -1.66
ATG4YNL223W MRS1P07266 363 aa4.7□□□□□ -1.66
ATG4YNL223W PAU19P0CE85 124 aa4.7□□□□□ -1.66
ATG4YNL223W PAU21P0CE86 164 aa4.7□□□□□ -1.66
ATG4YNL223W PAU22P0CE87 164 aa4.7□□□□□ -1.66
ATG4YNL223W DDI2P0CH63 225 aa4.7□□□□□ -1.66
ATG4YNL223W DDI3P0CH64 225 aa4.7□□□□□ -1.66
ATG4YNL223W PAU3P25610 124 aa4.7□□□□□ -1.66
ATG4YNL223W INO2P26798 304 aa4.7□□□□□ -1.66
ATG4YNL223W TIR2P33890 251 aa4.7□□□□□ -1.66
ATG4YNL223W YBR090CP38253 122 aa4.7□□□□□ -1.66
ATG4YNL223W HUA1P40325 198 aa4.7□□□□□ -1.66
ATG4YNL223W TOM7P53507 60 aa4.7□□□□□ -1.66
ATG4YNL223W SRL1Q08673 210 aa4.7□□□□□ -1.66
ATG4YNL223W TIM18Q08749 192 aa4.7□□□□□ -1.66
ATG4YNL223W ATX2Q12067 313 aa4.7□□□□□ -1.66
ATG4YNL223W RPL15AP05748 204 aaKnown RBP4.69□□□□□ -1.66
ATG4YNL223W YGL010WP25338 174 aa4.69□□□□□ -1.66
ATG4YNL223W SNU13P39990 126 aaKnown RBP4.69□□□□□ -1.66
ATG4YNL223W RPL15BP54780 204 aaPredicted RBP4.69□□□□□ -1.66
ATG4YNL223W ATP19P81451 68 aa4.69□□□□□ -1.66
ATG4YNL223W COX2P00410 251 aa4.69□□□□□ -1.66
ATG4YNL223W PRE9P23638 258 aaKnown RBP4.69□□□□□ -1.66
ATG4YNL223W YNK1P36010 153 aaKnown RBP4.69□□□□□ -1.66
ATG4YNL223W MIC12P38341 106 aa4.69□□□□□ -1.66
ATG4YNL223W SUR2P38992 349 aa4.69□□□□□ -1.66
ATG4YNL223W LSM4P40070 187 aaKnown RBP4.69□□□□□ -1.66
ATG4YNL223W TIR1P10863 254 aa4.68□□□□□ -1.66
ATG4YNL223W YCL042WP25572 119 aa4.68□□□□□ -1.66
ATG4YNL223W QRI5P32344 111 aa4.68□□□□□ -1.66
ATG4YNL223W YKL075CP36083 450 aa4.68□□□□□ -1.66
ATG4YNL223W POR2P40478 281 aa4.68□□□□□ -1.66
ATG4YNL223W YIL077CP40508 320 aa4.68□□□□□ -1.66
ATG4YNL223W VPS55P47111 140 aa4.68□□□□□ -1.66
ATG4YNL223W AIM24P47127 394 aa4.68□□□□□ -1.66
ATG4YNL223W SPG4Q04438 115 aa4.68□□□□□ -1.66
ATG4YNL223W DXO1Q06349 442 aa4.68□□□□□ -1.66
ATG4YNL223W YOR105WQ08504 108 aa4.68□□□□□ -1.66
ATG4YNL223W YCL001W-BQ96VH2 84 aa4.68□□□□□ -1.66
ATG4YNL223W DAD2P36162 133 aa4.67□□□□□ -1.66
ATG4YNL223W YPT10P38146 199 aa4.67□□□□□ -1.66
ATG4YNL223W SDH8P38345 138 aa4.67□□□□□ -1.66
ATG4YNL223W MBB1P39534 108 aa4.67□□□□□ -1.66
ATG4YNL223W YER188WP40103 239 aa4.67□□□□□ -1.66
ATG4YNL223W CAB4P53332 305 aa4.67□□□□□ -1.66
ATG4YNL223W ARL3Q02804 198 aa4.67□□□□□ -1.66
ATG4YNL223W YMR181CQ03231 154 aa4.67□□□□□ -1.66
ATG4YNL223W YNR034W-AQ3E841 98 aa4.67□□□□□ -1.66
ATG4YNL223W HTB2P02294 131 aa4.66□□□□□ -1.66
ATG4YNL223W ERS1P17261 260 aa4.66□□□□□ -1.66
ATG4YNL223W FZF1P32805 299 aa4.66□□□□□ -1.66
ATG4YNL223W IRC22P40006 225 aa4.66□□□□□ -1.66
ATG4YNL223W YNL194CP40169 301 aa4.66□□□□□ -1.66
ATG4YNL223W YDL183CP48569 320 aa4.66□□□□□ -1.66
ATG4YNL223W YGL185CP53100 379 aa4.66□□□□□ -1.66
ATG4YNL223W UBC7Q02159 165 aa4.66□□□□□ -1.66
ATG4YNL223W HOR7Q05827 59 aa4.66□□□□□ -1.66
ATG4YNL223W CMC2Q3E7A4 109 aa4.66□□□□□ -1.66
ATG4YNL223W HMRA1P0CY11 126 aa4.65□□□□□ -1.66
ATG4YNL223W CUP2P15315 225 aa4.65□□□□□ -1.66
ATG4YNL223W PAM17P36147 197 aa4.65□□□□□ -1.66
ATG4YNL223W MRPL28P36527 147 aa4.65□□□□□ -1.66
ATG4YNL223W YCR041WP37265 110 aa4.65□□□□□ -1.66
ATG4YNL223W MIX23P38162 196 aa4.65□□□□□ -1.66
ATG4YNL223W AME1P38313 324 aa4.65□□□□□ -1.66
ATG4YNL223W TOS8P53147 276 aa4.65□□□□□ -1.66
ATG4YNL223W NCE103P53615 221 aa4.65□□□□□ -1.66
ATG4YNL223W IZH1Q03419 316 aa4.65□□□□□ -1.66
ATG4YNL223W YPR053CQ6Q5F3 151 aa4.65□□□□□ -1.66
ATG4YNL223W URA2P07259 2214 aaKnown RBP4.65□□□□□ -1.67
ATG4YNL223W CCW14O13547 238 aa4.64□□□□□ -1.67
ATG4YNL223W POR1P04840 283 aaKnown RBP4.64□□□□□ -1.67
ATG4YNL223W RPL31BP0C2H9 113 aaKnown RBP4.64□□□□□ -1.67
ATG4YNL223W MRPL20P22354 195 aaPredicted RBP4.64□□□□□ -1.67
ATG4YNL223W SNF11P38956 169 aa4.64□□□□□ -1.67
ATG4YNL223W YMR141CP40211 102 aa4.64□□□□□ -1.67
ATG4YNL223W LCB3P47013 409 aa4.64□□□□□ -1.67
ATG4YNL223W YGR149WP48236 432 aa4.64□□□□□ -1.67
ATG4YNL223W COX18P53239 316 aa4.64□□□□□ -1.67
ATG4YNL223W DAD4P69851 72 aa4.64□□□□□ -1.67
ATG4YNL223W GIM5Q04493 163 aa4.64□□□□□ -1.67
ATG4YNL223W YOL160WQ08321 113 aa4.64□□□□□ -1.67
ATG4YNL223W SSS1P35179 80 aa4.63□□□□□ -1.67
ATG4YNL223W YPI1P43587 155 aa4.63□□□□□ -1.67
ATG4YNL223W YFR045WP43617 309 aa4.63□□□□□ -1.67
ATG4YNL223W CYT2Q00873 224 aa4.63□□□□□ -1.67
ATG4YNL223W MED7Q08278 222 aa4.63□□□□□ -1.67
ATG4YNL223W YPR013CQ12145 317 aa4.63□□□□□ -1.67
ATG4YNL223W MRPL31P14063 131 aaPredicted RBP4.62□□□□□ -1.67
ATG4YNL223W YGR025WP53216 100 aa4.62□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 130.5 ms