RNA–Protein interactions for RNA: YLR220W

CCC1, Transcript of Vacuolar Fe2+/Mn2+ transporter, yeast

Gene CCC1, Length 969 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCC1	YLR220W	TY1A-GR3	P0CX67	440 aa		11.96	□□□□□ -0.49
CCC1	YLR220W	TY1A-LR1	P0CX68	440 aa		11.96	□□□□□ -0.49
CCC1	YLR220W	TY1A-MR2	P0CX69	440 aa		11.96	□□□□□ -0.49
CCC1	YLR220W	GPI2	P46961	280 aa		11.96	□□□□□ -0.49
CCC1	YLR220W	LCB3	P47013	409 aa		11.96	□□□□□ -0.49
CCC1	YLR220W	TY1A-JR2	P47099	440 aa		11.96	□□□□□ -0.49
CCC1	YLR220W	SNO1	Q03144	224 aa		11.96	□□□□□ -0.49
CCC1	YLR220W	TY1A-DR1	Q03856	440 aa		11.96	□□□□□ -0.49
CCC1	YLR220W	TY1A-ML1	Q04706	440 aa	Known RBP	11.96	□□□□□ -0.49
CCC1	YLR220W	TY1A-NL2	Q12470	440 aa		11.96	□□□□□ -0.49
CCC1	YLR220W	TY1A-GR2	Q12485	440 aa		11.96	□□□□□ -0.49
CCC1	YLR220W	COQ3	P27680	312 aa		11.95	□□□□□ -0.5
CCC1	YLR220W	TAR1	Q8TGM6	124 aa		11.95	□□□□□ -0.5
CCC1	YLR220W	CMC1	P36064	111 aa		11.94	□□□□□ -0.5
CCC1	YLR220W	MBB1	P39534	108 aa		11.94	□□□□□ -0.5
CCC1	YLR220W	MIG1	P27705	504 aa		11.93	□□□□□ -0.5
CCC1	YLR220W	RTG1	P32607	177 aa		11.93	□□□□□ -0.5
CCC1	YLR220W	MPC2	P38857	129 aa		11.93	□□□□□ -0.5
CCC1	YLR220W	TDA4	P47153	279 aa		11.93	□□□□□ -0.5
CCC1	YLR220W	VPS71	Q03433	280 aa		11.93	□□□□□ -0.5
CCC1	YLR220W	RAV2	Q03956	351 aa		11.93	□□□□□ -0.5
CCC1	YLR220W	IZH3	Q07959	543 aa		11.93	□□□□□ -0.5
CCC1	YLR220W	PHD1	P36093	366 aa		11.92	□□□□□ -0.5
CCC1	YLR220W	MST28	P39552	234 aa		11.92	□□□□□ -0.5
CCC1	YLR220W	MST27	P53176	234 aa		11.92	□□□□□ -0.5
CCC1	YLR220W	TOM7	P53507	60 aa		11.92	□□□□□ -0.5
CCC1	YLR220W	RRG8	Q06109	277 aa		11.92	□□□□□ -0.5
CCC1	YLR220W	LAC1	P28496	418 aa		11.91	□□□□□ -0.5
CCC1	YLR220W	RPB3	P16370	318 aa	Known RBP	11.9	□□□□□ -0.5
CCC1	YLR220W	MRPL20	P22354	195 aa	Predicted RBP	11.9	□□□□□ -0.5
CCC1	YLR220W	YIL163C	P40448	117 aa		11.9	□□□□□ -0.5
CCC1	YLR220W	YGR025W	P53216	100 aa		11.9	□□□□□ -0.5
CCC1	YLR220W	TIM21	P53220	239 aa		11.9	□□□□□ -0.5
CCC1	YLR220W	YPR145C-A	Q2V2P0	78 aa		11.9	□□□□□ -0.5
CCC1	YLR220W	PRE9	P23638	258 aa	Known RBP	11.89	□□□□□ -0.51
CCC1	YLR220W	SRP21	P32342	167 aa		11.89	□□□□□ -0.51
CCC1	YLR220W	ECM33	P38248	429 aa	Known RBP	11.89	□□□□□ -0.51
CCC1	YLR220W	FYV6	P53913	173 aa		11.89	□□□□□ -0.51
CCC1	YLR220W	YNL146C-A	Q3E7Z1	64 aa		11.89	□□□□□ -0.51
CCC1	YLR220W	ADH3	P07246	375 aa	Known RBP	11.88	□□□□□ -0.51
CCC1	YLR220W	MRPS9	P38120	278 aa		11.88	□□□□□ -0.51
CCC1	YLR220W	SIM1	P40472	476 aa		11.88	□□□□□ -0.51
CCC1	YLR220W	YIP3	P53633	176 aa		11.88	□□□□□ -0.51
CCC1	YLR220W	GEP3	Q08622	556 aa		11.88	□□□□□ -0.51
CCC1	YLR220W	HTB2	P02294	131 aa		11.87	□□□□□ -0.51
CCC1	YLR220W	NTF2	P33331	125 aa	Known RBP	11.87	□□□□□ -0.51
CCC1	YLR220W	HUA1	P40325	198 aa		11.87	□□□□□ -0.51
CCC1	YLR220W	MDM10	P18409	493 aa		11.86	□□□□□ -0.51
CCC1	YLR220W	MRPL4	P36517	319 aa		11.86	□□□□□ -0.51
CCC1	YLR220W	ATP19	P81451	68 aa		11.86	□□□□□ -0.51
CCC1	YLR220W	YLR118C	Q12354	227 aa		11.86	□□□□□ -0.51
CCC1	YLR220W	YOR011W-A	Q3E807	68 aa		11.86	□□□□□ -0.51
CCC1	YLR220W	AME1	P38313	324 aa		11.85	□□□□□ -0.51
CCC1	YLR220W	YGL185C	P53100	379 aa		11.85	□□□□□ -0.51
CCC1	YLR220W	ALG13	P53178	202 aa		11.85	□□□□□ -0.51
CCC1	YLR220W	PRM7	Q12459	698 aa		11.85	□□□□□ -0.51
CCC1	YLR220W	YPT10	P38146	199 aa		11.84	□□□□□ -0.51
CCC1	YLR220W	HIT1	P46973	164 aa		11.84	□□□□□ -0.51
CCC1	YLR220W	COX18	P53239	316 aa		11.84	□□□□□ -0.51
CCC1	YLR220W	DAD3	P69850	94 aa		11.84	□□□□□ -0.51
CCC1	YLR220W	YDR274C	P87283	123 aa		11.84	□□□□□ -0.51
CCC1	YLR220W	YPL162C	Q12042	273 aa		11.84	□□□□□ -0.51
CCC1	YLR220W	YLR302C	O13544	120 aa		11.83	□□□□□ -0.52
CCC1	YLR220W	TY1A-LR4	P0C2I8	440 aa	Known RBP	11.83	□□□□□ -0.52
CCC1	YLR220W	TY1A-DR6	P0CX70	440 aa		11.83	□□□□□ -0.52
CCC1	YLR220W	TY1A-ER1	P0CX71	440 aa		11.83	□□□□□ -0.52
CCC1	YLR220W	TY1A-LR2	P0CX72	440 aa		11.83	□□□□□ -0.52
CCC1	YLR220W	TY1A-PL	P0CX73	440 aa		11.83	□□□□□ -0.52
CCC1	YLR220W	TY1A-JR1	P0CX74	440 aa		11.83	□□□□□ -0.52
CCC1	YLR220W	TY1A-LR3	P0CX75	440 aa		11.83	□□□□□ -0.52
CCC1	YLR220W	TY1A-ML2	P0CX76	440 aa		11.83	□□□□□ -0.52
CCC1	YLR220W	SDH4	P37298	181 aa		11.83	□□□□□ -0.52
CCC1	YLR220W	SRP14	P38985	146 aa		11.83	□□□□□ -0.52
CCC1	YLR220W	SPI1	P40092	148 aa		11.83	□□□□□ -0.52
CCC1	YLR220W	MIC26	P50087	233 aa		11.83	□□□□□ -0.52
CCC1	YLR220W	TRI1	Q05024	226 aa		11.83	□□□□□ -0.52
CCC1	YLR220W	STP4	Q07351	490 aa		11.83	□□□□□ -0.52
CCC1	YLR220W	TY1A-GR1	Q12085	440 aa		11.83	□□□□□ -0.52
CCC1	YLR220W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	11.83	□□□□□ -0.52
CCC1	YLR220W	TY1A-OL	Q92392	440 aa	Known RBP	11.83	□□□□□ -0.52
CCC1	YLR220W	FMP49	A0A023PZB3	126 aa		11.82	□□□□□ -0.52
CCC1	YLR220W	RPL31B	P0C2H9	113 aa	Known RBP	11.82	□□□□□ -0.52
CCC1	YLR220W	TIR1	P10863	254 aa		11.82	□□□□□ -0.52
CCC1	YLR220W	ATG8	P38182	117 aa	RIP-Chip data	11.82	□□□□□ -0.52	not detected
CCC1	YLR220W	HSP10	P38910	106 aa		11.82	□□□□□ -0.52
CCC1	YLR220W	PRE5	P40302	234 aa	Known RBP	11.82	□□□□□ -0.52
CCC1	YLR220W	GRH1	Q04410	372 aa	Known RBP	11.82	□□□□□ -0.52
CCC1	YLR220W	CCW12	Q12127	133 aa		11.81	□□□□□ -0.52
CCC1	YLR220W	YPR063C	Q12160	140 aa		11.81	□□□□□ -0.52
CCC1	YLR220W	YBR090C	P38253	122 aa		11.8	□□□□□ -0.52
CCC1	YLR220W	PGD1	P40356	397 aa		11.8	□□□□□ -0.52
CCC1	YLR220W	HHO1	P53551	258 aa		11.8	□□□□□ -0.52
CCC1	YLR220W	NAT3	Q06504	195 aa		11.8	□□□□□ -0.52
CCC1	YLR220W	POF1	P25576	258 aa		11.79	□□□□□ -0.52
CCC1	YLR220W	YMR141C	P40211	102 aa		11.79	□□□□□ -0.52
CCC1	YLR220W	PAU15	P40585	124 aa		11.79	□□□□□ -0.52
CCC1	YLR220W	YMR244W	Q04018	355 aa		11.79	□□□□□ -0.52
CCC1	YLR220W	DCN1	Q12395	269 aa		11.79	□□□□□ -0.52
CCC1	YLR220W	VMA21	P41806	77 aa		11.78	□□□□□ -0.52
CCC1	YLR220W	DAD4	P69851	72 aa		11.78	□□□□□ -0.52

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