RNA–Protein interactions for RNA: YKR100C

SKG1, Transcript of Transmembrane protein with a role in cell wall polymer composition, yeastyeast

Gene SKG1, Length 1,068 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKG1YKR100C SML1Q04964 104 aa2.66□□□□□ -1.98
SKG1YKR100C SUA5P32579 426 aa2.65□□□□□ -1.99
SKG1YKR100C SVP26P38869 228 aa2.65□□□□□ -1.99
SKG1YKR100C YAR1P46683 200 aa2.65□□□□□ -1.99
SKG1YKR100C TPN1P53099 579 aa2.65□□□□□ -1.99
SKG1YKR100C PGA1P53896 198 aa2.65□□□□□ -1.99
SKG1YKR100C SFH1Q06168 426 aa2.65□□□□□ -1.99
SKG1YKR100C NOT5Q12514 560 aaPredicted RBP2.65□□□□□ -1.99
SKG1YKR100C NTG1P31378 399 aa2.64□□□□□ -1.99
SKG1YKR100C DOG2P38773 246 aa2.64□□□□□ -1.99
SKG1YKR100C DOG1P38774 246 aa2.64□□□□□ -1.99
SKG1YKR100C SMX2P40204 77 aaKnown RBP2.64□□□□□ -1.99
SKG1YKR100C TAD2P47058 250 aa2.64□□□□□ -1.99
SKG1YKR100C DSK2P48510 373 aa2.64□□□□□ -1.99
SKG1YKR100C MED4Q12343 284 aa2.64□□□□□ -1.99
SKG1YKR100C MBA1P38300 278 aa2.63□□□□□ -1.99
SKG1YKR100C TIM11P81449 96 aaPredicted RBP2.63□□□□□ -1.99
SKG1YKR100C YML018CQ03730 393 aa2.63□□□□□ -1.99
SKG1YKR100C CTR3Q06686 241 aa2.63□□□□□ -1.99
SKG1YKR100C RPL37BP51402 88 aaKnown RBP2.62□□□□□ -1.99
SKG1YKR100C SNO1Q03144 224 aa2.62□□□□□ -1.99
SKG1YKR100C YOR283WQ12040 230 aaKnown RBP2.62□□□□□ -1.99
SKG1YKR100C ATG5Q12380 294 aa2.62□□□□□ -1.99
SKG1YKR100C GLE2P40066 365 aa2.61□□□□□ -1.99
SKG1YKR100C LOA1Q06508 300 aa2.61□□□□□ -1.99
SKG1YKR100C SDO1Q07953 250 aaKnown RBP2.61□□□□□ -1.99
SKG1YKR100C YGR240C-AQ3E786 66 aa2.61□□□□□ -1.99
SKG1YKR100C YAR023CD6VPM8 179 aa2.6□□□□□ -1.99
SKG1YKR100C YMR31P19955 123 aa2.6□□□□□ -1.99
SKG1YKR100C YJR146WP47174 117 aa2.6□□□□□ -1.99
SKG1YKR100C YGR025WP53216 100 aa2.6□□□□□ -1.99
SKG1YKR100C TIM21P53220 239 aa2.6□□□□□ -1.99
SKG1YKR100C ELP6Q04868 273 aa2.6□□□□□ -1.99
SKG1YKR100C FCF1Q05498 189 aaPredicted RBP2.6□□□□□ -1.99
SKG1YKR100C ATG31Q12421 196 aa2.6□□□□□ -1.99
SKG1YKR100C YMR316C-AI2HB70 103 aa2.59□□□□□ -1.99
SKG1YKR100C AIM19P40502 157 aa2.59□□□□□ -1.99
SKG1YKR100C GNA1P43577 159 aaPredicted RBP2.59□□□□□ -1.99
SKG1YKR100C NIF3P53081 288 aa2.59□□□□□ -1.99
SKG1YKR100C YGL149WP53116 101 aa2.59□□□□□ -1.99
SKG1YKR100C RPL26AP05743 127 aaKnown RBP2.58□□□□□ -2
SKG1YKR100C YCR016WP25617 290 aaKnown RBP2.58□□□□□ -2
SKG1YKR100C RRT1P38192 103 aa2.58□□□□□ -2
SKG1YKR100C NSA2P40078 261 aaKnown RBP2.58□□□□□ -2
SKG1YKR100C FMC1P40491 155 aa2.58□□□□□ -2
SKG1YKR100C OST3P48439 350 aa2.58□□□□□ -2
SKG1YKR100C RPL26BP53221 127 aaKnown RBP2.58□□□□□ -2
SKG1YKR100C PAM18Q07914 168 aa2.58□□□□□ -2
SKG1YKR100C MEU1Q07938 337 aaKnown RBP RIP-Chip data2.58□□□□□ -2not detected
SKG1YKR100C RAD28Q12021 506 aa2.58□□□□□ -2
SKG1YKR100C YDR029WQ12111 104 aa2.58□□□□□ -2
SKG1YKR100C NSL1Q12143 216 aa2.58□□□□□ -2
SKG1YKR100C SME1Q12330 94 aaPredicted RBP2.58□□□□□ -2
SKG1YKR100C QRI5P32344 111 aa2.57□□□□□ -2
SKG1YKR100C SUR2P38992 349 aa2.57□□□□□ -2
SKG1YKR100C PGD1P40356 397 aa2.57□□□□□ -2
SKG1YKR100C DAN1P47178 298 aa2.57□□□□□ -2
SKG1YKR100C RPB3P16370 318 aaKnown RBP2.56□□□□□ -2
SKG1YKR100C POP8P38208 133 aa2.56□□□□□ -2
SKG1YKR100C PDS1P40316 373 aaPredicted RBP2.56□□□□□ -2
SKG1YKR100C RPS29BP41058 56 aaKnown RBP2.56□□□□□ -2
SKG1YKR100C MRPL50P53724 139 aa2.56□□□□□ -2
SKG1YKR100C YPL119C-AQ3E751 87 aa2.56□□□□□ -2
SKG1YKR100C MATALPHA1P0CY06 175 aa2.55□□□□□ -2
SKG1YKR100C HMLALPHA1P0CY07 175 aa2.55□□□□□ -2
SKG1YKR100C YBR013CP38215 129 aa2.55□□□□□ -2
SKG1YKR100C YER085CP40058 173 aa2.55□□□□□ -2
SKG1YKR100C EMC5P40540 141 aa2.55□□□□□ -2
SKG1YKR100C YNG1Q08465 219 aa2.55□□□□□ -2
SKG1YKR100C RPL33AP05744 107 aaKnown RBP2.54□□□□□ -2
SKG1YKR100C RPL33BP41056 107 aaKnown RBP2.54□□□□□ -2
SKG1YKR100C RAV2Q03956 351 aa2.54□□□□□ -2
SKG1YKR100C GGA1Q06336 557 aa2.54□□□□□ -2
SKG1YKR100C Q0255P03881 472 aa2.53□□□□□ -2
SKG1YKR100C YBL010CP32788 280 aa2.53□□□□□ -2
SKG1YKR100C YMR315WQ04869 349 aaKnown RBP2.53□□□□□ -2
SKG1YKR100C HOM6P31116 359 aaKnown RBP2.52□□□□□ -2.01
SKG1YKR100C SNC2P33328 115 aa2.52□□□□□ -2.01
SKG1YKR100C PDX3P38075 228 aaKnown RBP2.52□□□□□ -2.01
SKG1YKR100C YHR138CP38841 114 aaPredicted RBP2.52□□□□□ -2.01
SKG1YKR100C ARG80P07249 177 aa2.51□□□□□ -2.01
SKG1YKR100C RPB7P34087 171 aa2.51□□□□□ -2.01
SKG1YKR100C RCN1P36054 211 aa2.51□□□□□ -2.01
SKG1YKR100C UMP1P38293 148 aa2.51□□□□□ -2.01
SKG1YKR100C CSM4Q08955 156 aa2.51□□□□□ -2.01
SKG1YKR100C BOL1Q3E793 110 aa2.51□□□□□ -2.01
SKG1YKR100C RNP1P32385 249 aa2.5□□□□□ -2.01
SKG1YKR100C YCT1Q12235 531 aa2.5□□□□□ -2.01
SKG1YKR100C KTI11Q3E840 82 aa2.5□□□□□ -2.01
SKG1YKR100C BFR1P38934 470 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
SKG1YKR100C MSS2P40990 351 aa2.49□□□□□ -2.01
SKG1YKR100C OTU1P43558 301 aa2.49□□□□□ -2.01
SKG1YKR100C ATG17Q06410 417 aa2.49□□□□□ -2.01
SKG1YKR100C YOR268CQ08734 132 aa2.49□□□□□ -2.01
SKG1YKR100C SNU23Q12368 194 aaPredicted RBP2.49□□□□□ -2.01
SKG1YKR100C GOS1P38736 223 aa2.48□□□□□ -2.01
SKG1YKR100C DIE2P50076 525 aa2.48□□□□□ -2.01
SKG1YKR100C YMD8Q03697 442 aa2.48□□□□□ -2.01
SKG1YKR100C YHR086W-AQ3E746 53 aa2.48□□□□□ -2.01
SKG1YKR100C YBR032WP38223 100 aa2.47□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 45.1 ms