RNA–Protein interactions for RNA: YKR026C

GCN3, Transcript of Alpha subunit of translation initiation factor eIF2B, yeast

Gene GCN3, Length 918 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GCN3	YKR026C	STD1	Q02794	444 aa		5.42	□□□□□ -1.54
GCN3	YKR026C	API2	Q04413	109 aa		5.42	□□□□□ -1.54
GCN3	YKR026C	NDE2	Q07500	545 aa		5.42	□□□□□ -1.54
GCN3	YKR026C	YCR024C-B	Q3E7Z8	88 aa		5.42	□□□□□ -1.54
GCN3	YKR026C	HAP3	P13434	144 aa		5.41	□□□□□ -1.54
GCN3	YKR026C	YCR007C	P25354	239 aa		5.41	□□□□□ -1.54
GCN3	YKR026C	PAU7	P39545	55 aa		5.41	□□□□□ -1.54
GCN3	YKR026C	YER121W	P40076	114 aa		5.41	□□□□□ -1.54
GCN3	YKR026C	PRE5	P40302	234 aa	Known RBP	5.41	□□□□□ -1.54
GCN3	YKR026C	YFL051C	P43552	160 aa		5.41	□□□□□ -1.54
GCN3	YKR026C	TDA4	P47153	279 aa		5.41	□□□□□ -1.54
GCN3	YKR026C	CWC27	Q02770	301 aa		5.41	□□□□□ -1.54
GCN3	YKR026C	YMR166C	Q03829	368 aa		5.41	□□□□□ -1.54
GCN3	YKR026C	RAV2	Q03956	351 aa		5.41	□□□□□ -1.54
GCN3	YKR026C	YDL218W	Q07629	317 aa		5.41	□□□□□ -1.54
GCN3	YKR026C	NAT5	Q08689	176 aa		5.41	□□□□□ -1.54
GCN3	YKR026C	YPR014C	Q6B0W2	109 aa		5.41	□□□□□ -1.54
GCN3	YKR026C	RPI1	P23250	407 aa	Known RBP	5.4	□□□□□ -1.54
GCN3	YKR026C	YCR022C	P25620	114 aa		5.4	□□□□□ -1.54
GCN3	YKR026C	ZRT1	P32804	376 aa		5.4	□□□□□ -1.54
GCN3	YKR026C	RRT1	P38192	103 aa		5.4	□□□□□ -1.54
GCN3	YKR026C	YER134C	P40081	178 aa		5.4	□□□□□ -1.54
GCN3	YKR026C	YGR018C	P53211	109 aa		5.4	□□□□□ -1.54
GCN3	YKR026C	HST4	P53688	370 aa		5.4	□□□□□ -1.54
GCN3	YKR026C	SUR7	P54003	302 aa		5.4	□□□□□ -1.54
GCN3	YKR026C	SED1	Q01589	338 aa		5.4	□□□□□ -1.54
GCN3	YKR026C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	5.4	□□□□□ -1.54	not detected
GCN3	YKR026C	RKI1	Q12189	258 aa		5.4	□□□□□ -1.54
GCN3	YKR026C	YDL009C	Q12210	107 aa		5.4	□□□□□ -1.54
GCN3	YKR026C	TPT1	Q12272	230 aa	Known RBP	5.4	□□□□□ -1.54
GCN3	YKR026C	HTB2	P02294	131 aa		5.39	□□□□□ -1.55
GCN3	YKR026C	CYC3	P06182	269 aa		5.39	□□□□□ -1.55
GCN3	YKR026C	MDM10	P18409	493 aa		5.39	□□□□□ -1.55
GCN3	YKR026C	MRPL20	P22354	195 aa	Predicted RBP	5.39	□□□□□ -1.55
GCN3	YKR026C	GSP1	P32835	219 aa	Known RBP	5.39	□□□□□ -1.55
GCN3	YKR026C	GSP2	P32836	220 aa	Known RBP	5.39	□□□□□ -1.55
GCN3	YKR026C	TVP18	Q04767	167 aa		5.39	□□□□□ -1.55
GCN3	YKR026C	IRC25	Q07951	179 aa		5.39	□□□□□ -1.55
GCN3	YKR026C	PAU23	Q07987	124 aa		5.39	□□□□□ -1.55
GCN3	YKR026C	CSM4	Q08955	156 aa		5.39	□□□□□ -1.55
GCN3	YKR026C	WTM2	Q12206	467 aa		5.39	□□□□□ -1.55
GCN3	YKR026C	YOR029W	Q12243	111 aa		5.39	□□□□□ -1.55
GCN3	YKR026C	PAU17	Q12370	124 aa		5.39	□□□□□ -1.55
GCN3	YKR026C	WIP1	Q2V2P8	89 aa		5.39	□□□□□ -1.55
GCN3	YKR026C	SEC4	P07560	215 aa	Known RBP	5.38	□□□□□ -1.55
GCN3	YKR026C	DDI2	P0CH63	225 aa		5.38	□□□□□ -1.55
GCN3	YKR026C	DDI3	P0CH64	225 aa		5.38	□□□□□ -1.55
GCN3	YKR026C	FEN2	P25621	512 aa	Known RBP	5.38	□□□□□ -1.55
GCN3	YKR026C	DAL80	P26343	269 aa		5.38	□□□□□ -1.55
GCN3	YKR026C	IES6	P32617	166 aa		5.38	□□□□□ -1.55
GCN3	YKR026C	PRS4	P38063	326 aa	Predicted RBP	5.38	□□□□□ -1.55
GCN3	YKR026C	ADH5	P38113	351 aa	Known RBP	5.38	□□□□□ -1.55
GCN3	YKR026C	GPI18	P38211	433 aa		5.38	□□□□□ -1.55
GCN3	YKR026C	YBR090C	P38253	122 aa		5.38	□□□□□ -1.55
GCN3	YKR026C	GZF3	P42944	551 aa	Known RBP	5.38	□□□□□ -1.55
GCN3	YKR026C	YFL015C	P43578	164 aa		5.38	□□□□□ -1.55
GCN3	YKR026C	YJL163C	P46996	555 aa		5.38	□□□□□ -1.55
GCN3	YKR026C	SDS23	P53172	527 aa		5.38	□□□□□ -1.55
GCN3	YKR026C	TOM7	P53507	60 aa		5.38	□□□□□ -1.55
GCN3	YKR026C	PKR1	Q03880	122 aa	Known RBP	5.38	□□□□□ -1.55
GCN3	YKR026C	YTH1	Q06102	208 aa	Predicted RBP	5.38	□□□□□ -1.55
GCN3	YKR026C	ATG33	Q06485	197 aa		5.38	□□□□□ -1.55
GCN3	YKR026C	AYT1	Q12226	474 aa		5.38	□□□□□ -1.55
GCN3	YKR026C	MRPL31	P14063	131 aa	Predicted RBP	5.37	□□□□□ -1.55
GCN3	YKR026C	LSM2	P38203	95 aa	Known RBP	5.37	□□□□□ -1.55
GCN3	YKR026C	ECM14	P38836	430 aa		5.37	□□□□□ -1.55
GCN3	YKR026C	YFR045W	P43617	309 aa		5.37	□□□□□ -1.55
GCN3	YKR026C	YPL162C	Q12042	273 aa		5.37	□□□□□ -1.55
GCN3	YKR026C	DAD1	Q12248	94 aa		5.37	□□□□□ -1.55
GCN3	YKR026C	HTL1	Q9URQ5	78 aa		5.37	□□□□□ -1.55
GCN3	YKR026C	RPL23A	P0CX41	137 aa	Known RBP	5.36	□□□□□ -1.55
GCN3	YKR026C	RPL23B	P0CX42	137 aa	Known RBP	5.36	□□□□□ -1.55
GCN3	YKR026C	SPC29	P33419	253 aa		5.36	□□□□□ -1.55
GCN3	YKR026C	TIR2	P33890	251 aa		5.36	□□□□□ -1.55
GCN3	YKR026C	CTR2	P38865	189 aa		5.36	□□□□□ -1.55
GCN3	YKR026C	YGL260W	P53056	76 aa		5.36	□□□□□ -1.55
GCN3	YKR026C	YGR045C	P53229	120 aa		5.36	□□□□□ -1.55
GCN3	YKR026C	MIX17	Q03667	156 aa		5.36	□□□□□ -1.55
GCN3	YKR026C	YDL157C	Q12082	118 aa		5.36	□□□□□ -1.55
GCN3	YKR026C	YLR050C	Q12155	161 aa	Known RBP	5.36	□□□□□ -1.55
GCN3	YKR026C	UTP23	Q12339	254 aa	Known RBP	5.36	□□□□□ -1.55
GCN3	YKR026C	ADE8	P04161	214 aa		5.35	□□□□□ -1.55
GCN3	YKR026C	YFL068W	P0CX99	160 aa		5.35	□□□□□ -1.55
GCN3	YKR026C	YLL066W-A	P0CY00	160 aa		5.35	□□□□□ -1.55
GCN3	YKR026C	YLL067W-A	P0CY01	160 aa		5.35	□□□□□ -1.55
GCN3	YKR026C	ALG14	P38242	237 aa		5.35	□□□□□ -1.55
GCN3	YKR026C	PRE3	P38624	215 aa		5.35	□□□□□ -1.55
GCN3	YKR026C	FYV4	P38783	130 aa	Predicted RBP	5.35	□□□□□ -1.55
GCN3	YKR026C	HAC1	P41546	238 aa		5.35	□□□□□ -1.55
GCN3	YKR026C	YJL028W	P47062	111 aa		5.35	□□□□□ -1.55
GCN3	YKR026C	YGL230C	P53074	147 aa		5.35	□□□□□ -1.55
GCN3	YKR026C	DAD4	P69851	72 aa		5.35	□□□□□ -1.55
GCN3	YKR026C	UPS3	Q04006	179 aa		5.35	□□□□□ -1.55
GCN3	YKR026C	ARC18	Q05933	178 aa	Known RBP	5.35	□□□□□ -1.55
GCN3	YKR026C	RXT3	Q07458	294 aa		5.35	□□□□□ -1.55
GCN3	YKR026C	FSF1	Q12029	327 aa	Known RBP	5.35	□□□□□ -1.55
GCN3	YKR026C	YDR215C	Q12240	137 aa		5.35	□□□□□ -1.55
GCN3	YKR026C	YBR056W-A	I2HB52	66 aa		5.34	□□□□□ -1.55
GCN3	YKR026C	UTR5	P32630	166 aa		5.34	□□□□□ -1.55
GCN3	YKR026C	FZF1	P32805	299 aa		5.34	□□□□□ -1.55

Retrieved 100 of 5,963 RNA–protein pairs in 25 ms