RNA–Protein interactions for RNA: YKL139W

CTK1, Transcript of Catalytic (alpha) subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK1, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK1YKL139W YGR039WP53225 103 aa2.15□□□□□ -2.06
CTK1YKL139W YLR361C-AQ3E795 98 aa2.15□□□□□ -2.06
CTK1YKL139W TOR1P35169 2470 aa2.15□□□□□ -2.07
CTK1YKL139W AHT1P29589 182 aa2.15□□□□□ -2.07
CTK1YKL139W UBC7Q02159 165 aa2.15□□□□□ -2.07
CTK1YKL139W SPC3Q12133 184 aa2.15□□□□□ -2.07
CTK1YKL139W RPC19P28000 142 aaKnown RBP2.14□□□□□ -2.07
CTK1YKL139W SHB17P36136 271 aaKnown RBP2.14□□□□□ -2.07
CTK1YKL139W YHL042WP38729 150 aa2.14□□□□□ -2.07
CTK1YKL139W MET31Q03081 177 aa2.14□□□□□ -2.07
CTK1YKL139W FMN1Q03778 218 aa2.14□□□□□ -2.07
CTK1YKL139W AVO2Q04749 426 aa2.14□□□□□ -2.07
CTK1YKL139W RPS25BP0C0T4 108 aaKnown RBP2.13□□□□□ -2.07
CTK1YKL139W YHR140WP38842 239 aa2.13□□□□□ -2.07
CTK1YKL139W RCF2P53721 224 aa2.13□□□□□ -2.07
CTK1YKL139W RPS25AQ3E792 108 aaPredicted RBP2.13□□□□□ -2.07
CTK1YKL139W YCL042WP25572 119 aa2.12□□□□□ -2.07
CTK1YKL139W SUA7P29055 345 aaPredicted RBP2.12□□□□□ -2.07
CTK1YKL139W IRC19Q07843 230 aa2.12□□□□□ -2.07
CTK1YKL139W SCS22Q6Q595 175 aa2.12□□□□□ -2.07
CTK1YKL139W TAR1Q8TGM6 124 aa2.12□□□□□ -2.07
CTK1YKL139W PRS3P38689 320 aaKnown RBP2.11□□□□□ -2.07
CTK1YKL139W NMA1Q06178 401 aaKnown RBP2.11□□□□□ -2.07
CTK1YKL139W ATP19P81451 68 aa2.1□□□□□ -2.07
CTK1YKL139W KEI1Q06346 221 aa2.1□□□□□ -2.07
CTK1YKL139W YGL041W-AP0C5N3 154 aa2.1□□□□□ -2.07
CTK1YKL139W YFL065CP43539 102 aa2.1□□□□□ -2.07
CTK1YKL139W YDR278CQ05612 105 aa2.1□□□□□ -2.07
CTK1YKL139W COA3Q3E7B2 85 aa2.1□□□□□ -2.07
CTK1YKL139W TRS20P38334 175 aa2.09□□□□□ -2.08
CTK1YKL139W TIM8P57744 87 aa2.09□□□□□ -2.08
CTK1YKL139W CMC4Q3E7A9 73 aa2.09□□□□□ -2.08
CTK1YKL139W YNL019CP53975 284 aa2.08□□□□□ -2.08
CTK1YKL139W DYN2Q02647 92 aa2.08□□□□□ -2.08
CTK1YKL139W MZM1Q03429 123 aaPredicted RBP2.08□□□□□ -2.08
CTK1YKL139W FCY1Q12178 158 aa2.08□□□□□ -2.08
CTK1YKL139W CYR1P08678 2026 aaKnown RBP2.08□□□□□ -2.08
CTK1YKL139W YEL014CP39999 101 aa2.07□□□□□ -2.08
CTK1YKL139W GLC8P41818 229 aa2.07□□□□□ -2.08
CTK1YKL139W HSP150P32478 413 aa2.06□□□□□ -2.08
CTK1YKL139W RPL14AP36105 138 aaKnown RBP2.06□□□□□ -2.08
CTK1YKL139W RPS20P38701 121 aaKnown RBP2.06□□□□□ -2.08
CTK1YKL139W RPL14BP38754 138 aaKnown RBP2.06□□□□□ -2.08
CTK1YKL139W HPM1P40481 377 aa2.06□□□□□ -2.08
CTK1YKL139W EMC4P53073 190 aa2.06□□□□□ -2.08
CTK1YKL139W ATP14Q12349 124 aa2.06□□□□□ -2.08
CTK1YKL139W YNL277W-AQ3E7Z0 62 aa2.06□□□□□ -2.08
CTK1YKL139W FMP49A0A023PZB3 126 aa2.05□□□□□ -2.08
CTK1YKL139W COX5BP00425 151 aa2.05□□□□□ -2.08
CTK1YKL139W SPG1P50088 95 aa2.05□□□□□ -2.08
CTK1YKL139W YPR153WQ06537 140 aa2.05□□□□□ -2.08
CTK1YKL139W AQY2P0CD90 149 aa2.04□□□□□ -2.08
CTK1YKL139W YBR242WP38331 238 aa2.04□□□□□ -2.08
CTK1YKL139W IPT1P38954 527 aa2.04□□□□□ -2.08
CTK1YKL139W APS3P47064 194 aa2.04□□□□□ -2.08
CTK1YKL139W UBR1P19812 1950 aa2.04□□□□□ -2.08
CTK1YKL139W RAD50P12753 1312 aa2.03□□□□□ -2.08
CTK1YKL139W YHR212W-AP0CX91 67 aa2.03□□□□□ -2.08
CTK1YKL139W RPS1BP23248 255 aaKnown RBP2.03□□□□□ -2.08
CTK1YKL139W LSM8P47093 109 aaKnown RBP2.03□□□□□ -2.08
CTK1YKL139W DIE2P50076 525 aa2.03□□□□□ -2.08
CTK1YKL139W YCL001W-AP87012 153 aa2.03□□□□□ -2.08
CTK1YKL139W CNL1Q06333 122 aa2.03□□□□□ -2.08
CTK1YKL139W YOR385WQ08909 290 aa2.03□□□□□ -2.08
CTK1YKL139W DDP1Q99321 188 aaKnown RBP2.03□□□□□ -2.08
CTK1YKL139W NHP6AP11632 93 aaKnown RBP2.02□□□□□ -2.09
CTK1YKL139W FYV5P25585 152 aa2.02□□□□□ -2.09
CTK1YKL139W HYM1P32464 399 aa2.02□□□□□ -2.09
CTK1YKL139W YGL230CP53074 147 aa2.02□□□□□ -2.09
CTK1YKL139W SOM1Q05676 74 aa2.02□□□□□ -2.09
CTK1YKL139W HUT1Q12520 339 aa2.02□□□□□ -2.09
CTK1YKL139W ECM31P38122 312 aa2.02□□□□□ -2.09
CTK1YKL139W YGR017WP53210 297 aa2.02□□□□□ -2.09
CTK1YKL139W ELC1Q03071 99 aa2.02□□□□□ -2.09
CTK1YKL139W TMA23Q03525 211 aa2.02□□□□□ -2.09
CTK1YKL139W SIN3P22579 1536 aa2.01□□□□□ -2.09
CTK1YKL139W PRE1P22141 198 aaKnown RBP2.01□□□□□ -2.09
CTK1YKL139W YCR050CP25630 102 aa2.01□□□□□ -2.09
CTK1YKL139W MRPL15P36523 253 aa2.01□□□□□ -2.09
CTK1YKL139W SFT1P43682 97 aa2.01□□□□□ -2.09
CTK1YKL139W FIT1Q04433 528 aa2.01□□□□□ -2.09
CTK1YKL139W RAF1Q06891 181 aa2.01□□□□□ -2.09
CTK1YKL139W UBR2Q07963 1872 aa2□□□□□ -2.09
CTK1YKL139W KIN28P06242 306 aa2□□□□□ -2.09
CTK1YKL139W TVP18Q04767 167 aa2□□□□□ -2.09
CTK1YKL139W GPI11Q06636 219 aa2□□□□□ -2.09
CTK1YKL139W RPS1AP33442 255 aaKnown RBP1.99□□□□□ -2.09
CTK1YKL139W VMA10P48836 114 aaKnown RBP1.99□□□□□ -2.09
CTK1YKL139W YPR203WQ08994 102 aa1.99□□□□□ -2.09
CTK1YKL139W SWR1Q05471 1514 aa1.99□□□□□ -2.09
CTK1YKL139W PHS1P40857 217 aa1.98□□□□□ -2.09
CTK1YKL139W NKP2Q06162 153 aa1.98□□□□□ -2.09
CTK1YKL139W SLO1Q3E784 85 aa1.98□□□□□ -2.09
CTK1YKL139W BNI1P41832 1953 aa1.98□□□□□ -2.09
CTK1YKL139W IRC20Q06554 1556 aa1.98□□□□□ -2.09
CTK1YKL139W BEM2P39960 2167 aaKnown RBP1.98□□□□□ -2.09
CTK1YKL139W YAL064WP39711 94 aa1.98□□□□□ -2.09
CTK1YKL139W Q0144Q9ZZW2 109 aa1.98□□□□□ -2.09
CTK1YKL139W ACC1Q00955 2233 aaKnown RBP1.97□□□□□ -2.09
CTK1YKL139W MRP49P32388 137 aa1.97□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms