RNA–Protein interactions for RNA: YJL173C

RFA3, Transcript of Subunit of heterotrimeric Replication Protein A (RPA), yeastyeast

Gene RFA3, Length 369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RFA3YJL173C EFG1Q3E705 233 aaKnown RBP1.05□□□□□ -2.24
RFA3YJL173C YDL241WQ07738 123 aa1.04□□□□□ -2.24
RFA3YJL173C NSL1Q12143 216 aa1.04□□□□□ -2.24
RFA3YJL173C YBR027CP38220 110 aa1.03□□□□□ -2.24
RFA3YJL173C ORM1P53224 222 aa1.03□□□□□ -2.24
RFA3YJL173C RCF2P53721 224 aa1.03□□□□□ -2.24
RFA3YJL173C YCR001WP25347 104 aa1.02□□□□□ -2.25
RFA3YJL173C RIF1P29539 1916 aa1.02□□□□□ -2.25
RFA3YJL173C VMA10P48836 114 aaKnown RBP1.02□□□□□ -2.25
RFA3YJL173C TLG1Q03322 224 aa1.02□□□□□ -2.25
RFA3YJL173C YHR213W-BQ8TGK1 99 aa1.02□□□□□ -2.25
RFA3YJL173C YER181CP40097 107 aa1.01□□□□□ -2.25
RFA3YJL173C DER1P38307 211 aa1□□□□□ -2.25
RFA3YJL173C SLM6P38343 150 aa1□□□□□ -2.25
RFA3YJL173C FIP1P45976 327 aa1□□□□□ -2.25
RFA3YJL173C GPI2P46961 280 aa1□□□□□ -2.25
RFA3YJL173C RFU1Q08003 200 aa1□□□□□ -2.25
RFA3YJL173C YPR202WQ08993 238 aa1□□□□□ -2.25
RFA3YJL173C HAP2P06774 265 aa0.99□□□□□ -2.25
RFA3YJL173C SRP21P32342 167 aa0.99□□□□□ -2.25
RFA3YJL173C YNL122CP53921 115 aaPredicted RBP0.99□□□□□ -2.25
RFA3YJL173C IRC19Q07843 230 aa0.99□□□□□ -2.25
RFA3YJL173C RPS22AP0C0W1 130 aaKnown RBP0.98□□□□□ -2.25
RFA3YJL173C YOL013W-AP0C272 63 aaPredicted RBP0.98□□□□□ -2.25
RFA3YJL173C PHO13P19881 312 aa0.98□□□□□ -2.25
RFA3YJL173C MRS4P23500 304 aa0.98□□□□□ -2.25
RFA3YJL173C HSP150P32478 413 aa0.98□□□□□ -2.25
RFA3YJL173C SRL3P36167 246 aa0.98□□□□□ -2.25
RFA3YJL173C FIG1P38224 298 aa0.98□□□□□ -2.25
RFA3YJL173C RAV2Q03956 351 aa0.98□□□□□ -2.25
RFA3YJL173C IRC21Q04772 201 aa0.98□□□□□ -2.25
RFA3YJL173C YPR153WQ06537 140 aa0.98□□□□□ -2.25
RFA3YJL173C RPS22BQ3E7Y3 130 aaKnown RBP0.98□□□□□ -2.25
RFA3YJL173C SCS22Q6Q595 175 aa0.98□□□□□ -2.25
RFA3YJL173C MRPL24P36525 258 aaPredicted RBP0.97□□□□□ -2.25
RFA3YJL173C IPT1P38954 527 aa0.97□□□□□ -2.25
RFA3YJL173C SED1Q01589 338 aa0.97□□□□□ -2.25
RFA3YJL173C GPI11Q06636 219 aa0.97□□□□□ -2.25
RFA3YJL173C HUT1Q12520 339 aa0.97□□□□□ -2.25
RFA3YJL173C CMC4Q3E7A9 73 aa0.97□□□□□ -2.25
RFA3YJL173C RPL33AP05744 107 aaKnown RBP0.96□□□□□ -2.26
RFA3YJL173C NHP6AP11632 93 aaKnown RBP0.96□□□□□ -2.26
RFA3YJL173C ATG8P38182 117 aaRIP-Chip data0.96□□□□□ -2.26not detected
RFA3YJL173C YJL009WP47078 108 aa0.96□□□□□ -2.26
RFA3YJL173C PKR1Q03880 122 aaKnown RBP0.96□□□□□ -2.26
RFA3YJL173C MGR2Q02889 113 aa0.94□□□□□ -2.26
RFA3YJL173C DDR48P18899 430 aaKnown RBP0.93□□□□□ -2.26
RFA3YJL173C HSP12P22943 109 aaKnown RBP0.93□□□□□ -2.26
RFA3YJL173C HHY1P39982 102 aa0.93□□□□□ -2.26
RFA3YJL173C EST3Q03096 181 aa0.93□□□□□ -2.26
RFA3YJL173C PET20Q99373 253 aa0.93□□□□□ -2.26
RFA3YJL173C YJL218WP40892 196 aaKnown RBP0.92□□□□□ -2.26
RFA3YJL173C PRM3Q08931 133 aa0.92□□□□□ -2.26
RFA3YJL173C MHF1Q3E835 90 aa0.92□□□□□ -2.26
RFA3YJL173C KTI11Q3E840 82 aa0.92□□□□□ -2.26
RFA3YJL173C RIB3Q99258 208 aa0.92□□□□□ -2.26
RFA3YJL173C HSL1P34244 1518 aa0.92□□□□□ -2.26
RFA3YJL173C ROM2P51862 1356 aaKnown RBP0.92□□□□□ -2.26
RFA3YJL173C HFA1P32874 2273 aa0.91□□□□□ -2.26
RFA3YJL173C SEN15Q04675 128 aa0.91□□□□□ -2.26
RFA3YJL173C MOG1P47123 218 aa0.9□□□□□ -2.27
RFA3YJL173C SPG1P50088 95 aa0.9□□□□□ -2.27
RFA3YJL173C YDR366CP87287 132 aa0.9□□□□□ -2.27
RFA3YJL173C RAF1Q06891 181 aa0.9□□□□□ -2.27
RFA3YJL173C COA6Q3E846 104 aa0.9□□□□□ -2.27
RFA3YJL173C PET54P10834 293 aa0.89□□□□□ -2.27
RFA3YJL173C FUN14P18411 198 aa0.89□□□□□ -2.27
RFA3YJL173C DIE2P50076 525 aa0.89□□□□□ -2.27
RFA3YJL173C EFM5P53200 248 aaKnown RBP0.89□□□□□ -2.27
RFA3YJL173C YOR1P53049 1477 aa0.88□□□□□ -2.27
RFA3YJL173C ANB1P19211 157 aa0.88□□□□□ -2.27
RFA3YJL173C RPC19P28000 142 aaKnown RBP0.88□□□□□ -2.27
RFA3YJL173C SUI1P32911 108 aaKnown RBP0.88□□□□□ -2.27
RFA3YJL173C ARC19P33204 171 aaKnown RBP0.88□□□□□ -2.27
RFA3YJL173C IPI1P38803 334 aaPredicted RBP0.88□□□□□ -2.27
RFA3YJL173C YMR141CP40211 102 aa0.88□□□□□ -2.27
RFA3YJL173C LSM8P47093 109 aaKnown RBP0.88□□□□□ -2.27
RFA3YJL173C NAT5Q08689 176 aa0.88□□□□□ -2.27
RFA3YJL173C COX5BP00425 151 aa0.87□□□□□ -2.27
RFA3YJL173C YGL014C-AP0C5N1 53 aa0.87□□□□□ -2.27
RFA3YJL173C RPS1BP23248 255 aaKnown RBP0.87□□□□□ -2.27
RFA3YJL173C RME1P32338 300 aaKnown RBP0.87□□□□□ -2.27
RFA3YJL173C YNL019CP53975 284 aa0.87□□□□□ -2.27
RFA3YJL173C FYV5P25585 152 aa0.86□□□□□ -2.27
RFA3YJL173C YHR140WP38842 239 aa0.86□□□□□ -2.27
RFA3YJL173C LSM1P47017 172 aaKnown RBP0.86□□□□□ -2.27
RFA3YJL173C YCL001W-AP87012 153 aa0.86□□□□□ -2.27
RFA3YJL173C MRPL44P19956 98 aa0.85□□□□□ -2.27
RFA3YJL173C YAP3P38749 330 aa0.85□□□□□ -2.27
RFA3YJL173C RBL2P48606 106 aaKnown RBP0.85□□□□□ -2.27
RFA3YJL173C HHO1P53551 258 aa0.85□□□□□ -2.27
RFA3YJL173C YMR122CQ03879 124 aa0.85□□□□□ -2.27
RFA3YJL173C DDP1Q99321 188 aaKnown RBP0.85□□□□□ -2.27
RFA3YJL173C CDC39P25655 2108 aaKnown RBP0.84□□□□□ -2.27
RFA3YJL173C YGR201CP42936 225 aa0.84□□□□□ -2.27
RFA3YJL173C YGR039WP53225 103 aa0.84□□□□□ -2.27
RFA3YJL173C SOM1Q05676 74 aa0.84□□□□□ -2.27
RFA3YJL173C PFY1P07274 126 aa0.83□□□□□ -2.28
RFA3YJL173C PHB1P40961 287 aa0.83□□□□□ -2.28
RFA3YJL173C YHR213WP0CI67 198 aa0.82□□□□□ -2.28
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms