RNA–Protein interactions for RNA: YIL084C

SDS3, Transcript of Component of the Rpd3L histone deacetylase complex, yeastyeast

Gene SDS3, Length 984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDS3YIL084C YPL119C-AQ3E751 87 aa2.57□□□□□ -2
SDS3YIL084C RFC2P40348 353 aa2.56□□□□□ -2
SDS3YIL084C YJL028WP47062 111 aa2.56□□□□□ -2
SDS3YIL084C DOC1P53068 250 aa2.56□□□□□ -2
SDS3YIL084C ERV29P53337 310 aa2.56□□□□□ -2
SDS3YIL084C ODC2Q99297 307 aa2.56□□□□□ -2
SDS3YIL084C COX9P07255 59 aa2.55□□□□□ -2
SDS3YIL084C QRI5P32344 111 aa2.55□□□□□ -2
SDS3YIL084C RNP1P32385 249 aa2.55□□□□□ -2
SDS3YIL084C SFK1P35735 353 aa2.55□□□□□ -2
SDS3YIL084C MIC12P38341 106 aa2.55□□□□□ -2
SDS3YIL084C YAR068WP39564 161 aa2.55□□□□□ -2
SDS3YIL084C LST8P41318 303 aa2.55□□□□□ -2
SDS3YIL084C MIC26P50087 233 aa2.55□□□□□ -2
SDS3YIL084C YGR042WP53227 271 aa2.55□□□□□ -2
SDS3YIL084C YGR219WP53307 113 aa2.55□□□□□ -2
SDS3YIL084C MEU1Q07938 337 aaKnown RBP RIP-Chip data2.55□□□□□ -2not detected
SDS3YIL084C YOR011W-AQ3E807 68 aa2.55□□□□□ -2
SDS3YIL084C YCR001WP25347 104 aa2.54□□□□□ -2
SDS3YIL084C RFA3P26755 122 aaKnown RBP2.54□□□□□ -2
SDS3YIL084C SPS18P32572 300 aa2.54□□□□□ -2
SDS3YIL084C PAU2P32612 120 aa2.54□□□□□ -2
SDS3YIL084C SHE2P36068 246 aaKnown RBP RIP-Chip data2.54□□□□□ -2not detected
SDS3YIL084C YNL194CP40169 301 aa2.54□□□□□ -2
SDS3YIL084C YJL218WP40892 196 aaKnown RBP2.54□□□□□ -2
SDS3YIL084C ERG25P53045 309 aa2.54□□□□□ -2
SDS3YIL084C SSU72P53538 206 aaPredicted RBP2.54□□□□□ -2
SDS3YIL084C HNT1Q04344 158 aaKnown RBP2.54□□□□□ -2
SDS3YIL084C ATG39Q06159 398 aa2.54□□□□□ -2
SDS3YIL084C HUG1Q6Q5K6 68 aa2.54□□□□□ -2
SDS3YIL084C SEN2P16658 377 aa2.53□□□□□ -2
SDS3YIL084C SRY1P36007 326 aa2.53□□□□□ -2
SDS3YIL084C FCY21P40039 528 aa2.53□□□□□ -2
SDS3YIL084C TDA4P47153 279 aa2.53□□□□□ -2
SDS3YIL084C YGR025WP53216 100 aa2.53□□□□□ -2
SDS3YIL084C FYV6P53913 173 aa2.53□□□□□ -2
SDS3YIL084C LCL2Q08045 131 aa2.53□□□□□ -2
SDS3YIL084C YJL197C-AP0C5P0 93 aa2.52□□□□□ -2.01
SDS3YIL084C YMR31P19955 123 aa2.52□□□□□ -2.01
SDS3YIL084C RNA15P25299 296 aaPredicted RBP2.52□□□□□ -2.01
SDS3YIL084C NVJ1P38881 321 aa2.52□□□□□ -2.01
SDS3YIL084C MAK3Q03503 176 aa2.52□□□□□ -2.01
SDS3YIL084C SDO1Q07953 250 aaKnown RBP2.52□□□□□ -2.01
SDS3YIL084C YPR108W-AQ3E7B3 70 aa2.52□□□□□ -2.01
SDS3YIL084C YBL008W-AQ3E821 79 aa2.52□□□□□ -2.01
SDS3YIL084C PET54P10834 293 aa2.51□□□□□ -2.01
SDS3YIL084C URA6P15700 204 aa2.51□□□□□ -2.01
SDS3YIL084C ANB1P19211 157 aa2.51□□□□□ -2.01
SDS3YIL084C AHC2P25649 128 aa2.51□□□□□ -2.01
SDS3YIL084C FMP23P38231 175 aa2.51□□□□□ -2.01
SDS3YIL084C YHR138CP38841 114 aaPredicted RBP2.51□□□□□ -2.01
SDS3YIL084C SMB1P40018 196 aaKnown RBP2.51□□□□□ -2.01
SDS3YIL084C OTU1P43558 301 aa2.51□□□□□ -2.01
SDS3YIL084C IRC18P47056 224 aa2.51□□□□□ -2.01
SDS3YIL084C DIE2P50076 525 aa2.51□□□□□ -2.01
SDS3YIL084C YOR268CQ08734 132 aa2.51□□□□□ -2.01
SDS3YIL084C YLR365WQ7LIF2 110 aa2.51□□□□□ -2.01
SDS3YIL084C RPL26AP05743 127 aaKnown RBP2.5□□□□□ -2.01
SDS3YIL084C EGD2P38879 174 aaKnown RBP2.5□□□□□ -2.01
SDS3YIL084C BNA6P43619 295 aa2.5□□□□□ -2.01
SDS3YIL084C DSK2P48510 373 aa2.5□□□□□ -2.01
SDS3YIL084C RPL26BP53221 127 aaKnown RBP2.5□□□□□ -2.01
SDS3YIL084C RGM1Q00453 211 aa2.5□□□□□ -2.01
SDS3YIL084C SGF11Q03067 99 aa2.5□□□□□ -2.01
SDS3YIL084C MED4Q12343 284 aa2.5□□□□□ -2.01
SDS3YIL084C BOL1Q3E793 110 aa2.5□□□□□ -2.01
SDS3YIL084C TRR1P29509 319 aaKnown RBP2.49□□□□□ -2.01
SDS3YIL084C HOM6P31116 359 aaKnown RBP2.49□□□□□ -2.01
SDS3YIL084C UPS2P35200 230 aa2.49□□□□□ -2.01
SDS3YIL084C COS8P38723 381 aa2.49□□□□□ -2.01
SDS3YIL084C DOG2P38773 246 aa2.49□□□□□ -2.01
SDS3YIL084C DOG1P38774 246 aa2.49□□□□□ -2.01
SDS3YIL084C ARO8P53090 500 aaKnown RBP2.49□□□□□ -2.01
SDS3YIL084C DYN2Q02647 92 aa2.49□□□□□ -2.01
SDS3YIL084C TLG1Q03322 224 aa2.49□□□□□ -2.01
SDS3YIL084C CSM4Q08955 156 aa2.49□□□□□ -2.01
SDS3YIL084C URA5P13298 226 aaKnown RBP2.48□□□□□ -2.01
SDS3YIL084C RRT1P38192 103 aa2.48□□□□□ -2.01
SDS3YIL084C VMA22P38784 181 aa2.48□□□□□ -2.01
SDS3YIL084C POR2P40478 281 aa2.48□□□□□ -2.01
SDS3YIL084C YJL027CP47063 138 aaPredicted RBP2.48□□□□□ -2.01
SDS3YIL084C ARP3P47117 449 aaKnown RBP2.48□□□□□ -2.01
SDS3YIL084C MRPL50P53724 139 aa2.48□□□□□ -2.01
SDS3YIL084C YLR031WQ07978 186 aa2.48□□□□□ -2.01
SDS3YIL084C HRD1Q08109 551 aa2.48□□□□□ -2.01
SDS3YIL084C SNU23Q12368 194 aaPredicted RBP2.48□□□□□ -2.01
SDS3YIL084C SNF11P38956 169 aa2.47□□□□□ -2.01
SDS3YIL084C YER135CP40082 130 aa2.47□□□□□ -2.01
SDS3YIL084C YGR050CP53231 118 aa2.47□□□□□ -2.01
SDS3YIL084C YPL225WQ08971 146 aaKnown RBP2.47□□□□□ -2.01
SDS3YIL084C ATG41Q12048 136 aa2.47□□□□□ -2.01
SDS3YIL084C MSH5Q12175 901 aa2.47□□□□□ -2.01
SDS3YIL084C YNL200CP40165 246 aaKnown RBP2.46□□□□□ -2.02
SDS3YIL084C GPI2P46961 280 aa2.46□□□□□ -2.02
SDS3YIL084C YIP3P53633 176 aa2.46□□□□□ -2.02
SDS3YIL084C PAM18Q07914 168 aa2.46□□□□□ -2.02
SDS3YIL084C YCT1Q12235 531 aa2.46□□□□□ -2.02
SDS3YIL084C SEC22P22214 214 aa2.45□□□□□ -2.02
SDS3YIL084C CAT5P41735 233 aa2.45□□□□□ -2.02
SDS3YIL084C OST2P46964 130 aa2.45□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 56 ms