RNA–Protein interactions for RNA: YHR056C

RSC30, Transcript of Component of the RSC chromatin remodeling complex, yeast

Gene RSC30, Length 2,652 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSC30	YHR056C	LSM7	P53905	115 aa	Known RBP	3.79	□□□□□ -1.8
RSC30	YHR056C	MGR3	Q04472	501 aa		3.79	□□□□□ -1.8
RSC30	YHR056C	UTP23	Q12339	254 aa	Known RBP	3.79	□□□□□ -1.8
RSC30	YHR056C	SHB17	P36136	271 aa	Known RBP	3.79	□□□□□ -1.8
RSC30	YHR056C	POM34	Q12445	299 aa		3.79	□□□□□ -1.8
RSC30	YHR056C	MBB1	P39534	108 aa		3.78	□□□□□ -1.8
RSC30	YHR056C	DSK2	P48510	373 aa		3.78	□□□□□ -1.8
RSC30	YHR056C	TIM44	Q01852	431 aa		3.78	□□□□□ -1.8
RSC30	YHR056C	Q0255	P03881	472 aa		3.78	□□□□□ -1.8
RSC30	YHR056C	YGR269W	P40326	108 aa		3.78	□□□□□ -1.8
RSC30	YHR056C	BER1	Q06688	274 aa	Known RBP	3.78	□□□□□ -1.8
RSC30	YHR056C	KRE9	P39005	276 aa		3.77	□□□□□ -1.81
RSC30	YHR056C	SER2	P42941	309 aa		3.77	□□□□□ -1.81
RSC30	YHR056C	KEG1	P43614	200 aa		3.77	□□□□□ -1.81
RSC30	YHR056C	BET5	Q03630	159 aa		3.77	□□□□□ -1.81
RSC30	YHR056C	COA2	Q3E823	68 aa		3.77	□□□□□ -1.81
RSC30	YHR056C	HSP12	P22943	109 aa	Known RBP	3.77	□□□□□ -1.81
RSC30	YHR056C	LSM2	P38203	95 aa	Known RBP	3.77	□□□□□ -1.81
RSC30	YHR056C	RDI1	Q12434	202 aa		3.77	□□□□□ -1.81
RSC30	YHR056C	TPI1	P00942	248 aa	Known RBP	3.76	□□□□□ -1.81
RSC30	YHR056C	MRS1	P07266	363 aa		3.76	□□□□□ -1.81
RSC30	YHR056C	MRPL28	P36527	147 aa		3.76	□□□□□ -1.81
RSC30	YHR056C	RRT13	P40042	185 aa		3.76	□□□□□ -1.81
RSC30	YHR056C	DPP1	Q05521	289 aa		3.76	□□□□□ -1.81
RSC30	YHR056C	YMR316C-A	I2HB70	103 aa		3.76	□□□□□ -1.81
RSC30	YHR056C	TIM21	P53220	239 aa		3.76	□□□□□ -1.81
RSC30	YHR056C	QCR9	P22289	66 aa		3.75	□□□□□ -1.81
RSC30	YHR056C	YMR082C	Q04276	118 aa		3.75	□□□□□ -1.81
RSC30	YHR056C	YNL217W	P40152	326 aa		3.75	□□□□□ -1.81
RSC30	YHR056C	ATG33	Q06485	197 aa		3.75	□□□□□ -1.81
RSC30	YHR056C	SPT14	P32363	452 aa		3.74	□□□□□ -1.81
RSC30	YHR056C	KTI12	P34253	313 aa	Known RBP	3.74	□□□□□ -1.81
RSC30	YHR056C	TRS20	P38334	175 aa		3.74	□□□□□ -1.81
RSC30	YHR056C	YLR307C-A	Q3E825	87 aa		3.74	□□□□□ -1.81
RSC30	YHR056C	HTB2	P02294	131 aa		3.74	□□□□□ -1.81
RSC30	YHR056C	YEA6	P39953	335 aa		3.74	□□□□□ -1.81
RSC30	YHR056C	RAI1	P53063	387 aa	Known RBP	3.74	□□□□□ -1.81
RSC30	YHR056C	AIM34	Q03673	198 aa		3.74	□□□□□ -1.81
RSC30	YHR056C	YLR125W	Q12138	136 aa		3.74	□□□□□ -1.81
RSC30	YHR056C	PRR2	Q12310	699 aa		3.74	□□□□□ -1.81
RSC30	YHR056C	YLR342W-A	Q3E810	57 aa		3.74	□□□□□ -1.81
RSC30	YHR056C	SPS2	P08459	502 aa		3.73	□□□□□ -1.81
RSC30	YHR056C	MGA1	P53050	456 aa		3.73	□□□□□ -1.81
RSC30	YHR056C	FIT2	Q08906	153 aa		3.73	□□□□□ -1.81
RSC30	YHR056C	AGA1	P32323	725 aa		3.73	□□□□□ -1.81
RSC30	YHR056C	YBL059W	P34224	193 aa		3.73	□□□□□ -1.81
RSC30	YHR056C	IPI1	P38803	334 aa	Predicted RBP	3.72	□□□□□ -1.81
RSC30	YHR056C	AME1	P38313	324 aa		3.72	□□□□□ -1.81
RSC30	YHR056C	CAF40	P53829	373 aa		3.72	□□□□□ -1.81
RSC30	YHR056C	RPL16B	P26785	198 aa	Known RBP	3.71	□□□□□ -1.82
RSC30	YHR056C	ERG28	P40030	148 aa		3.71	□□□□□ -1.82
RSC30	YHR056C	MIX23	P38162	196 aa		3.71	□□□□□ -1.82
RSC30	YHR056C	ATC1	Q04005	294 aa		3.71	□□□□□ -1.82
RSC30	YHR056C	YDR115W	Q04598	105 aa		3.71	□□□□□ -1.82
RSC30	YHR056C	RPL12A	P0CX53	165 aa	Known RBP	3.7	□□□□□ -1.82
RSC30	YHR056C	RPL12B	P0CX54	165 aa		3.7	□□□□□ -1.82
RSC30	YHR056C	DER1	P38307	211 aa		3.7	□□□□□ -1.82
RSC30	YHR056C	SVP26	P38869	228 aa		3.7	□□□□□ -1.82
RSC30	YHR056C	ARR3	Q06598	404 aa		3.7	□□□□□ -1.82
RSC30	YHR056C	YDL242W	Q07746	117 aa		3.7	□□□□□ -1.82
RSC30	YHR056C	YMR122W-A	Q3E842	84 aa		3.7	□□□□□ -1.82
RSC30	YHR056C	YOL085C	Q99345	113 aa		3.7	□□□□□ -1.82
RSC30	YHR056C	YEA4	P40004	342 aa		3.7	□□□□□ -1.82
RSC30	YHR056C	YLR146W-A	Q2V2P1	62 aa		3.7	□□□□□ -1.82
RSC30	YHR056C	YBR200W-A	Q3E755	54 aa		3.7	□□□□□ -1.82
RSC30	YHR056C	YAR023C	D6VPM8	179 aa		3.69	□□□□□ -1.82
RSC30	YHR056C	PPQ1	P32945	549 aa		3.69	□□□□□ -1.82
RSC30	YHR056C	ARO2	P28777	376 aa	Known RBP	3.69	□□□□□ -1.82
RSC30	YHR056C	MRPL50	P53724	139 aa		3.69	□□□□□ -1.82
RSC30	YHR056C	UPS3	Q04006	179 aa		3.69	□□□□□ -1.82
RSC30	YHR056C	CTR3	Q06686	241 aa		3.69	□□□□□ -1.82
RSC30	YHR056C	TY1A-BR	Q12217	440 aa		3.69	□□□□□ -1.82
RSC30	YHR056C	RPL31B	P0C2H9	113 aa	Known RBP	3.68	□□□□□ -1.82
RSC30	YHR056C	NNK1	P36003	928 aa		3.68	□□□□□ -1.82
RSC30	YHR056C	YHR173C	P38864	112 aa		3.68	□□□□□ -1.82
RSC30	YHR056C	TEM1	P38987	245 aa		3.68	□□□□□ -1.82
RSC30	YHR056C	RIB4	P50861	169 aa	Predicted RBP	3.68	□□□□□ -1.82
RSC30	YHR056C	MRPS16	Q02608	121 aa		3.68	□□□□□ -1.82
RSC30	YHR056C	MMS2	P53152	137 aa		3.68	□□□□□ -1.82
RSC30	YHR056C	PMP3	P87284	55 aa		3.68	□□□□□ -1.82
RSC30	YHR056C	TY1A-NL2	Q12470	440 aa		3.68	□□□□□ -1.82
RSC30	YHR056C	PCC1	Q3E833	88 aa		3.68	□□□□□ -1.82
RSC30	YHR056C	MRP49	P32388	137 aa		3.67	□□□□□ -1.82
RSC30	YHR056C	YDR029W	Q12111	104 aa		3.67	□□□□□ -1.82
RSC30	YHR056C	YCR023C	P25351	611 aa		3.67	□□□□□ -1.82
RSC30	YHR056C	PNC1	P53184	216 aa	Known RBP	3.67	□□□□□ -1.82
RSC30	YHR056C	DGA1	Q08650	418 aa		3.67	□□□□□ -1.82
RSC30	YHR056C	YMR007W	Q03675	126 aa		3.67	□□□□□ -1.82
RSC30	YHR056C	YMR320W	Q04897	101 aa		3.67	□□□□□ -1.82
RSC30	YHR056C	UBC5	P15732	148 aa		3.66	□□□□□ -1.82
RSC30	YHR056C	UTP11	P34247	250 aa	Predicted RBP	3.66	□□□□□ -1.82
RSC30	YHR056C	YBR242W	P38331	238 aa		3.66	□□□□□ -1.82
RSC30	YHR056C	SUR2	P38992	349 aa		3.66	□□□□□ -1.82
RSC30	YHR056C	DIF1	O13577	133 aa		3.66	□□□□□ -1.82
RSC30	YHR056C	IES3	Q12345	250 aa		3.66	□□□□□ -1.82
RSC30	YHR056C	RRT15	Q3E811	62 aa		3.66	□□□□□ -1.82
RSC30	YHR056C	GCN3	P14741	305 aa		3.65	□□□□□ -1.82
RSC30	YHR056C	RPL16A	P26784	199 aa	Known RBP	3.65	□□□□□ -1.82
RSC30	YHR056C	AHT1	P29589	182 aa		3.65	□□□□□ -1.82
RSC30	YHR056C	AVO2	Q04749	426 aa		3.65	□□□□□ -1.82

Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms