RNA–Protein interactions for RNA: YFR001W

LOC1, Nuclear protein involved in asymmetric localization of ASH1 mRNA, yeastyeast

Gene LOC1, Length 615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LOC1YFR001W RIB3Q99258 208 aa0.6□□□□□ -2.31
LOC1YFR001W HAP2P06774 265 aa0.59□□□□□ -2.31
LOC1YFR001W RPL30P14120 105 aaKnown RBP0.59□□□□□ -2.31
LOC1YFR001W SRP21P32342 167 aa0.59□□□□□ -2.31
LOC1YFR001W YGL193CP53097 103 aa0.59□□□□□ -2.31
LOC1YFR001W RCF2P53721 224 aa0.59□□□□□ -2.31
LOC1YFR001W IRC19Q07843 230 aa0.59□□□□□ -2.31
LOC1YFR001W YOR072WQ08486 104 aa0.59□□□□□ -2.31
LOC1YFR001W PRM3Q08931 133 aa0.59□□□□□ -2.31
LOC1YFR001W CHD1P32657 1468 aa0.59□□□□□ -2.32
LOC1YFR001W RPS22AP0C0W1 130 aaKnown RBP0.58□□□□□ -2.32
LOC1YFR001W YGL041W-AP0C5N3 154 aa0.58□□□□□ -2.32
LOC1YFR001W FIP1P45976 327 aa0.58□□□□□ -2.32
LOC1YFR001W YDR476CQ03362 224 aa0.58□□□□□ -2.32
LOC1YFR001W MAK3Q03503 176 aa0.58□□□□□ -2.32
LOC1YFR001W RPS22BQ3E7Y3 130 aaKnown RBP0.58□□□□□ -2.32
LOC1YFR001W SEN15Q04675 128 aa0.57□□□□□ -2.32
LOC1YFR001W RFU1Q08003 200 aa0.57□□□□□ -2.32
LOC1YFR001W YPR202WQ08993 238 aa0.57□□□□□ -2.32
LOC1YFR001W APQ12P40532 138 aa0.56□□□□□ -2.32
LOC1YFR001W GPI11Q06636 219 aa0.55□□□□□ -2.32
LOC1YFR001W CMC2Q3E7A4 109 aa0.55□□□□□ -2.32
LOC1YFR001W RPL33AP05744 107 aaKnown RBP0.54□□□□□ -2.32
LOC1YFR001W SLM6P38343 150 aa0.54□□□□□ -2.32
LOC1YFR001W YMR141CP40211 102 aa0.54□□□□□ -2.32
LOC1YFR001W YPR153WQ06537 140 aa0.54□□□□□ -2.32
LOC1YFR001W SAC3P46674 1301 aa0.54□□□□□ -2.32
LOC1YFR001W UBR1P19812 1950 aa0.54□□□□□ -2.32
LOC1YFR001W HSL1P34244 1518 aa0.54□□□□□ -2.32
LOC1YFR001W PEX34P25584 144 aa0.53□□□□□ -2.32
LOC1YFR001W YER181CP40097 107 aa0.53□□□□□ -2.32
LOC1YFR001W YPD1Q07688 167 aa0.53□□□□□ -2.32
LOC1YFR001W QCR2P07257 368 aa0.52□□□□□ -2.33
LOC1YFR001W PHO13P19881 312 aa0.52□□□□□ -2.33
LOC1YFR001W MRPL24P36525 258 aaPredicted RBP0.52□□□□□ -2.33
LOC1YFR001W GPI2P46961 280 aa0.52□□□□□ -2.33
LOC1YFR001W DIE2P50076 525 aa0.52□□□□□ -2.33
LOC1YFR001W YJL218WP40892 196 aaKnown RBP0.51□□□□□ -2.33
LOC1YFR001W ATP19P81451 68 aa0.51□□□□□ -2.33
LOC1YFR001W RRT7Q07829 113 aa0.51□□□□□ -2.33
LOC1YFR001W SCS22Q6Q595 175 aa0.51□□□□□ -2.33
LOC1YFR001W RPS28BP0C0X0 67 aaKnown RBP0.5□□□□□ -2.33
LOC1YFR001W PBI2P0CT04 75 aaKnown RBP0.5□□□□□ -2.33
LOC1YFR001W RPL43AP0CX25 92 aaKnown RBP0.5□□□□□ -2.33
LOC1YFR001W RPL43BP0CX26 92 aa0.5□□□□□ -2.33
LOC1YFR001W NHP6AP11632 93 aaKnown RBP0.5□□□□□ -2.33
LOC1YFR001W DDR48P18899 430 aaKnown RBP0.5□□□□□ -2.33
LOC1YFR001W NSL1Q12143 216 aa0.5□□□□□ -2.33
LOC1YFR001W EFG1Q3E705 233 aaKnown RBP0.5□□□□□ -2.33
LOC1YFR001W RPS28AQ3E7X9 67 aaPredicted RBP0.5□□□□□ -2.33
LOC1YFR001W AME1P38313 324 aa0.49□□□□□ -2.33
LOC1YFR001W YHR140WP38842 239 aa0.49□□□□□ -2.33
LOC1YFR001W VMA10P48836 114 aaKnown RBP0.49□□□□□ -2.33
LOC1YFR001W IRC21Q04772 201 aa0.49□□□□□ -2.33
LOC1YFR001W YLR307C-AQ3E825 87 aa0.49□□□□□ -2.33
LOC1YFR001W MHF1Q3E835 90 aa0.49□□□□□ -2.33
LOC1YFR001W LAA1P39526 2014 aa0.48□□□□□ -2.33
LOC1YFR001W YGL014C-AP0C5N1 53 aa0.48□□□□□ -2.33
LOC1YFR001W BUB2P26448 306 aaPredicted RBP0.48□□□□□ -2.33
LOC1YFR001W EST3Q03096 181 aa0.48□□□□□ -2.33
LOC1YFR001W DER1P38307 211 aa0.47□□□□□ -2.33
LOC1YFR001W YJL009WP47078 108 aa0.47□□□□□ -2.33
LOC1YFR001W YMR122CQ03879 124 aa0.47□□□□□ -2.33
LOC1YFR001W COX5BP00425 151 aa0.46□□□□□ -2.34
LOC1YFR001W YLR157W-EP0CF00 54 aa0.45□□□□□ -2.34
LOC1YFR001W SRL3P36167 246 aa0.45□□□□□ -2.34
LOC1YFR001W MVB12P42939 101 aa0.44□□□□□ -2.34
LOC1YFR001W YCL001W-AP87012 153 aa0.44□□□□□ -2.34
LOC1YFR001W YNL019CP53975 284 aa0.43□□□□□ -2.34
LOC1YFR001W HUT1Q12520 339 aa0.43□□□□□ -2.34
LOC1YFR001W HSP12P22943 109 aaKnown RBP0.42□□□□□ -2.34
LOC1YFR001W LST8P41318 303 aa0.42□□□□□ -2.34
LOC1YFR001W FYV5P25585 152 aa0.41□□□□□ -2.34
LOC1YFR001W RME1P32338 300 aaKnown RBP0.41□□□□□ -2.34
LOC1YFR001W YOR034C-AQ3E735 80 aa0.41□□□□□ -2.34
LOC1YFR001W COA6Q3E846 104 aa0.41□□□□□ -2.34
LOC1YFR001W GSC2P40989 1895 aa0.41□□□□□ -2.34
LOC1YFR001W RPS1BP23248 255 aaKnown RBP0.4□□□□□ -2.35
LOC1YFR001W COA4Q05809 96 aa0.4□□□□□ -2.35
LOC1YFR001W HUG1Q6Q5K6 68 aa0.4□□□□□ -2.35
LOC1YFR001W KTI11Q3E840 82 aa0.39□□□□□ -2.35
LOC1YFR001W NMT1P14743 455 aa0.38□□□□□ -2.35
LOC1YFR001W PHB1P40961 287 aa0.38□□□□□ -2.35
LOC1YFR001W YGR201CP42936 225 aa0.38□□□□□ -2.35
LOC1YFR001W SOM1Q05676 74 aa0.38□□□□□ -2.35
LOC1YFR001W FIT3Q08907 204 aa0.38□□□□□ -2.35
LOC1YFR001W RPL40AP0CH08 128 aaKnown RBP0.37□□□□□ -2.35
LOC1YFR001W RPL40BP0CH09 128 aaKnown RBP0.37□□□□□ -2.35
LOC1YFR001W YHR213WP0CI67 198 aa0.37□□□□□ -2.35
LOC1YFR001W IPI1P38803 334 aaPredicted RBP0.37□□□□□ -2.35
LOC1YFR001W YMR321CQ04898 105 aa0.37□□□□□ -2.35
LOC1YFR001W FIG1P38224 298 aa0.36□□□□□ -2.35
LOC1YFR001W ANB1P19211 157 aa0.35□□□□□ -2.35
LOC1YFR001W NAT5Q08689 176 aa0.35□□□□□ -2.35
LOC1YFR001W URA2P07259 2214 aaKnown RBP0.34□□□□□ -2.35
LOC1YFR001W FUN14P18411 198 aa0.34□□□□□ -2.36
LOC1YFR001W UTP11P34247 250 aaPredicted RBP0.34□□□□□ -2.36
LOC1YFR001W EMC4P53073 190 aa0.34□□□□□ -2.36
LOC1YFR001W YPL067CQ02754 198 aa0.34□□□□□ -2.36
LOC1YFR001W RAV2Q03956 351 aa0.34□□□□□ -2.36
Retrieved 100 of 5,963 RNA–protein pairs in 8.8 ms