RNA–Protein interactions for RNA: YDR484W

VPS52, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS52, Length 1,926 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS52YDR484W FMN1Q03778 218 aa0.52□□□□□ -2.33
VPS52YDR484W CMC2Q3E7A4 109 aa0.52□□□□□ -2.33
VPS52YDR484W HAP2P06774 265 aa0.52□□□□□ -2.33
VPS52YDR484W RPS22AP0C0W1 130 aaKnown RBP0.52□□□□□ -2.33
VPS52YDR484W RPL30P14120 105 aaKnown RBP0.52□□□□□ -2.33
VPS52YDR484W YER121WP40076 114 aa0.52□□□□□ -2.33
VPS52YDR484W YGL193CP53097 103 aa0.52□□□□□ -2.33
VPS52YDR484W RCF2P53721 224 aa0.52□□□□□ -2.33
VPS52YDR484W YPD1Q07688 167 aa0.52□□□□□ -2.33
VPS52YDR484W RPS22BQ3E7Y3 130 aaKnown RBP0.52□□□□□ -2.33
VPS52YDR484W ROM2P51862 1356 aaKnown RBP0.52□□□□□ -2.33
VPS52YDR484W MRS4P23500 304 aa0.51□□□□□ -2.33
VPS52YDR484W ATP19P81451 68 aa0.51□□□□□ -2.33
VPS52YDR484W MGR2Q02889 113 aa0.51□□□□□ -2.33
VPS52YDR484W PRM3Q08931 133 aa0.51□□□□□ -2.33
VPS52YDR484W IPT1P38954 527 aa0.5□□□□□ -2.33
VPS52YDR484W APQ12P40532 138 aa0.5□□□□□ -2.33
VPS52YDR484W QCR2P07257 368 aa0.5□□□□□ -2.33
VPS52YDR484W SRP21P32342 167 aa0.5□□□□□ -2.33
VPS52YDR484W SED1Q01589 338 aa0.5□□□□□ -2.33
VPS52YDR484W IRC19Q07843 230 aa0.5□□□□□ -2.33
VPS52YDR484W PBI2P0CT04 75 aaKnown RBP0.49□□□□□ -2.33
VPS52YDR484W RME1P32338 300 aaKnown RBP0.49□□□□□ -2.33
VPS52YDR484W FIP1P45976 327 aa0.49□□□□□ -2.33
VPS52YDR484W RFU1Q08003 200 aa0.49□□□□□ -2.33
VPS52YDR484W RIB3Q99258 208 aa0.49□□□□□ -2.33
VPS52YDR484W GPI11Q06636 219 aa0.48□□□□□ -2.33
VPS52YDR484W RRT7Q07829 113 aa0.48□□□□□ -2.33
VPS52YDR484W YPR202WQ08993 238 aa0.48□□□□□ -2.33
VPS52YDR484W RPL33AP05744 107 aaKnown RBP0.48□□□□□ -2.33
VPS52YDR484W SEN15Q04675 128 aa0.48□□□□□ -2.33
VPS52YDR484W PEX34P25584 144 aa0.47□□□□□ -2.33
VPS52YDR484W YER181CP40097 107 aa0.47□□□□□ -2.33
VPS52YDR484W GPI2P46961 280 aa0.47□□□□□ -2.33
VPS52YDR484W VMA10P48836 114 aaKnown RBP0.47□□□□□ -2.33
VPS52YDR484W SMD2Q06217 110 aaKnown RBP0.47□□□□□ -2.33
VPS52YDR484W YPR153WQ06537 140 aa0.47□□□□□ -2.33
VPS52YDR484W RPS28BP0C0X0 67 aaKnown RBP0.46□□□□□ -2.34
VPS52YDR484W AME1P38313 324 aa0.46□□□□□ -2.34
VPS52YDR484W SLM6P38343 150 aa0.46□□□□□ -2.34
VPS52YDR484W YMR141CP40211 102 aa0.46□□□□□ -2.34
VPS52YDR484W IRC21Q04772 201 aa0.46□□□□□ -2.34
VPS52YDR484W EFG1Q3E705 233 aaKnown RBP0.46□□□□□ -2.34
VPS52YDR484W RPS28AQ3E7X9 67 aaPredicted RBP0.46□□□□□ -2.34
VPS52YDR484W HSL1P34244 1518 aa0.46□□□□□ -2.34
VPS52YDR484W NHP6AP11632 93 aaKnown RBP0.46□□□□□ -2.34
VPS52YDR484W PHO13P19881 312 aa0.46□□□□□ -2.34
VPS52YDR484W BUB2P26448 306 aaPredicted RBP0.46□□□□□ -2.34
VPS52YDR484W YJL009WP47078 108 aa0.46□□□□□ -2.34
VPS52YDR484W NSL1Q12143 216 aa0.46□□□□□ -2.34
VPS52YDR484W SCS22Q6Q595 175 aa0.46□□□□□ -2.34
VPS52YDR484W SRL3P36167 246 aa0.45□□□□□ -2.34
VPS52YDR484W MRPL24P36525 258 aaPredicted RBP0.45□□□□□ -2.34
VPS52YDR484W UBR1P19812 1950 aa0.44□□□□□ -2.34
VPS52YDR484W EST3Q03096 181 aa0.44□□□□□ -2.34
VPS52YDR484W MHF1Q3E835 90 aa0.44□□□□□ -2.34
VPS52YDR484W YHR140WP38842 239 aa0.44□□□□□ -2.34
VPS52YDR484W YJL218WP40892 196 aaKnown RBP0.44□□□□□ -2.34
VPS52YDR484W DIE2P50076 525 aa0.44□□□□□ -2.34
VPS52YDR484W TLG1Q03322 224 aa0.44□□□□□ -2.34
VPS52YDR484W RPL43AP0CX25 92 aaKnown RBP0.43□□□□□ -2.34
VPS52YDR484W RPL43BP0CX26 92 aa0.43□□□□□ -2.34
VPS52YDR484W DDR48P18899 430 aaKnown RBP0.43□□□□□ -2.34
VPS52YDR484W DER1P38307 211 aa0.43□□□□□ -2.34
VPS52YDR484W HUT1Q12520 339 aa0.43□□□□□ -2.34
VPS52YDR484W QCR6P00127 147 aa0.42□□□□□ -2.34
VPS52YDR484W YGL014C-AP0C5N1 53 aa0.42□□□□□ -2.34
VPS52YDR484W YLR307C-AQ3E825 87 aa0.41□□□□□ -2.34
VPS52YDR484W COA6Q3E846 104 aa0.41□□□□□ -2.34
VPS52YDR484W COX5BP00425 151 aa0.4□□□□□ -2.34
VPS52YDR484W HSP12P22943 109 aaKnown RBP0.4□□□□□ -2.34
VPS52YDR484W TRS20P38334 175 aa0.4□□□□□ -2.34
VPS52YDR484W YMR122CQ03879 124 aa0.4□□□□□ -2.34
VPS52YDR484W KTI11Q3E840 82 aa0.4□□□□□ -2.34
VPS52YDR484W MVB12P42939 101 aa0.4□□□□□ -2.35
VPS52YDR484W YCL001W-AP87012 153 aa0.4□□□□□ -2.35
VPS52YDR484W LAA1P39526 2014 aa0.4□□□□□ -2.35
VPS52YDR484W YNL019CP53975 284 aa0.39□□□□□ -2.35
VPS52YDR484W FYV5P25585 152 aa0.38□□□□□ -2.35
VPS52YDR484W ARC19P33204 171 aaKnown RBP0.38□□□□□ -2.35
VPS52YDR484W YLR157W-EP0CF00 54 aa0.38□□□□□ -2.35
VPS52YDR484W FUN14P18411 198 aa0.38□□□□□ -2.35
VPS52YDR484W RPS1BP23248 255 aaKnown RBP0.38□□□□□ -2.35
VPS52YDR484W FIG1P38224 298 aa0.38□□□□□ -2.35
VPS52YDR484W LST8P41318 303 aa0.38□□□□□ -2.35
VPS52YDR484W RAV2Q03956 351 aa0.37□□□□□ -2.35
VPS52YDR484W YMR320WQ04897 101 aa0.37□□□□□ -2.35
VPS52YDR484W NMT1P14743 455 aa0.36□□□□□ -2.35
VPS52YDR484W ANB1P19211 157 aa0.36□□□□□ -2.35
VPS52YDR484W IPI1P38803 334 aaPredicted RBP0.36□□□□□ -2.35
VPS52YDR484W PHB1P40961 287 aa0.36□□□□□ -2.35
VPS52YDR484W PKR1Q03880 122 aaKnown RBP0.36□□□□□ -2.35
VPS52YDR484W YMR321CQ04898 105 aa0.36□□□□□ -2.35
VPS52YDR484W COA4Q05809 96 aa0.36□□□□□ -2.35
VPS52YDR484W RAF1Q06891 181 aa0.36□□□□□ -2.35
VPS52YDR484W NAT5Q08689 176 aa0.36□□□□□ -2.35
VPS52YDR484W YOR034C-AQ3E735 80 aa0.36□□□□□ -2.35
VPS52YDR484W HUG1Q6Q5K6 68 aa0.36□□□□□ -2.35
VPS52YDR484W PET20Q99373 253 aa0.36□□□□□ -2.35
VPS52YDR484W YHR213WP0CI67 198 aa0.36□□□□□ -2.35
Retrieved 100 of 5,963 RNA–protein pairs in 41.4 ms