RNA–Protein interactions for RNA: YDR213W

UPC2, Transcript of Sterol regulatory element binding protein, yeast

Gene UPC2, Length 2,742 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UPC2	YDR213W	FYV4	P38783	130 aa	Predicted RBP	3.61	□□□□□ -1.83
UPC2	YDR213W	YJL193W	P39542	402 aa		3.61	□□□□□ -1.83
UPC2	YDR213W	YER079W	P40052	210 aa	Known RBP	3.61	□□□□□ -1.83
UPC2	YDR213W	BOR1	P53838	576 aa		3.61	□□□□□ -1.83
UPC2	YDR213W	VPS71	Q03433	280 aa		3.61	□□□□□ -1.83
UPC2	YDR213W	DPP1	Q05521	289 aa		3.61	□□□□□ -1.83
UPC2	YDR213W	YOR292C	Q08743	309 aa		3.61	□□□□□ -1.83
UPC2	YDR213W	PRP46	Q12417	451 aa	Predicted RBP	3.61	□□□□□ -1.83
UPC2	YDR213W	YHR214C-E	Q8TGK0	99 aa		3.61	□□□□□ -1.83
UPC2	YDR213W	NAG1	Q8TGN9	163 aa		3.61	□□□□□ -1.83
UPC2	YDR213W	CYR1	P08678	2026 aa	Known RBP	3.61	□□□□□ -1.83
UPC2	YDR213W	YAL064W-B	O13512	126 aa		3.6	□□□□□ -1.83
UPC2	YDR213W	UGX2	P32772	223 aa		3.6	□□□□□ -1.83
UPC2	YDR213W	SHR5	P41912	237 aa		3.6	□□□□□ -1.83
UPC2	YDR213W	YFL065C	P43539	102 aa		3.6	□□□□□ -1.83
UPC2	YDR213W	TOM7	P53507	60 aa		3.6	□□□□□ -1.83
UPC2	YDR213W	RAV2	Q03956	351 aa		3.6	□□□□□ -1.83
UPC2	YDR213W	IRC13	Q08630	104 aa		3.6	□□□□□ -1.83
UPC2	YDR213W	YPR203W	Q08994	102 aa		3.6	□□□□□ -1.83
UPC2	YDR213W	FAS1	P07149	2051 aa	Known RBP	3.6	□□□□□ -1.83
UPC2	YDR213W	TOR1	P35169	2470 aa		3.6	□□□□□ -1.83
UPC2	YDR213W	FZF1	P32805	299 aa		3.6	□□□□□ -1.83
UPC2	YDR213W	LTP1	P40347	161 aa		3.6	□□□□□ -1.83
UPC2	YDR213W	YGL118C	P53132	145 aa		3.6	□□□□□ -1.83
UPC2	YDR213W	YDR286C	Q05530	114 aa		3.6	□□□□□ -1.83
UPC2	YDR213W	YIL102C-A	Q2V2P5	75 aa		3.6	□□□□□ -1.83
UPC2	YDR213W	BPH1	P25356	2167 aa		3.6	□□□□□ -1.83
UPC2	YDR213W	YDR157W	A0A023PZE8	133 aa		3.59	□□□□□ -1.83
UPC2	YDR213W	YCR007C	P25354	239 aa		3.59	□□□□□ -1.83
UPC2	YDR213W	NTC20	P38302	140 aa	Predicted RBP	3.59	□□□□□ -1.83
UPC2	YDR213W	SNF11	P38956	169 aa		3.59	□□□□□ -1.83
UPC2	YDR213W	AYT1	Q12226	474 aa		3.59	□□□□□ -1.83
UPC2	YDR213W	FAB1	P34756	2278 aa		3.59	□□□□□ -1.83
UPC2	YDR213W	QRI5	P32344	111 aa		3.59	□□□□□ -1.83
UPC2	YDR213W	DOG2	P38773	246 aa		3.59	□□□□□ -1.83
UPC2	YDR213W	CYB5	P40312	120 aa		3.59	□□□□□ -1.83
UPC2	YDR213W	PRM3	Q08931	133 aa		3.59	□□□□□ -1.83
UPC2	YDR213W	RPS22B	Q3E7Y3	130 aa	Known RBP	3.59	□□□□□ -1.83
UPC2	YDR213W	GLT1	Q12680	2145 aa	Known RBP	3.59	□□□□□ -1.84
UPC2	YDR213W	ECM14	P38836	430 aa		3.58	□□□□□ -1.84
UPC2	YDR213W	MOB1	P40484	314 aa		3.58	□□□□□ -1.84
UPC2	YDR213W	LST8	P41318	303 aa		3.58	□□□□□ -1.84
UPC2	YDR213W	GTO3	Q04806	366 aa		3.58	□□□□□ -1.84
UPC2	YDR213W	DFM1	Q12743	341 aa	Known RBP	3.58	□□□□□ -1.84
UPC2	YDR213W	VAR1	P02381	398 aa		3.58	□□□□□ -1.84
UPC2	YDR213W	RPL7A	P05737	244 aa	Known RBP	3.58	□□□□□ -1.84
UPC2	YDR213W	RPS16A	P0CX51	143 aa	Known RBP	3.58	□□□□□ -1.84
UPC2	YDR213W	RPS16B	P0CX52	143 aa	Known RBP	3.58	□□□□□ -1.84
UPC2	YDR213W	PHO85	P17157	305 aa		3.58	□□□□□ -1.84
UPC2	YDR213W	URK1	P27515	501 aa		3.58	□□□□□ -1.84
UPC2	YDR213W	ATX1	P38636	73 aa		3.58	□□□□□ -1.84
UPC2	YDR213W	YHR130C	P38834	111 aa		3.58	□□□□□ -1.84
UPC2	YDR213W	YAR068W	P39564	161 aa		3.58	□□□□□ -1.84
UPC2	YDR213W	YFR045W	P43617	309 aa		3.58	□□□□□ -1.84
UPC2	YDR213W	MIC27	P50945	234 aa		3.58	□□□□□ -1.84
UPC2	YDR213W	BRP1	P53194	125 aa		3.58	□□□□□ -1.84
UPC2	YDR213W	YDL218W	Q07629	317 aa		3.58	□□□□□ -1.84
UPC2	YDR213W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	3.58	□□□□□ -1.84	not detected
UPC2	YDR213W	CSF1	Q12150	2958 aa		3.58	□□□□□ -1.84
UPC2	YDR213W	SRP21	P32342	167 aa		3.57	□□□□□ -1.84
UPC2	YDR213W	UBS1	P38290	277 aa		3.57	□□□□□ -1.84
UPC2	YDR213W	OST2	P46964	130 aa		3.57	□□□□□ -1.84
UPC2	YDR213W	DIC1	Q06143	298 aa		3.57	□□□□□ -1.84
UPC2	YDR213W	YOL029C	Q08187	201 aa		3.57	□□□□□ -1.84
UPC2	YDR213W	RDL2	Q08742	149 aa	Known RBP	3.57	□□□□□ -1.84
UPC2	YDR213W	TIM18	Q08749	192 aa		3.57	□□□□□ -1.84
UPC2	YDR213W	YFL068W	P0CX99	160 aa		3.57	□□□□□ -1.84
UPC2	YDR213W	YLL066W-A	P0CY00	160 aa		3.57	□□□□□ -1.84
UPC2	YDR213W	YLL067W-A	P0CY01	160 aa		3.57	□□□□□ -1.84
UPC2	YDR213W	SUR7	P54003	302 aa		3.57	□□□□□ -1.84
UPC2	YDR213W	YIL014C-A	Q02598	104 aa		3.57	□□□□□ -1.84
UPC2	YDR213W	YML079W	Q03629	201 aa		3.57	□□□□□ -1.84
UPC2	YDR213W	BET5	Q03630	159 aa		3.57	□□□□□ -1.84
UPC2	YDR213W	TAO3	P40468	2376 aa		3.57	□□□□□ -1.84
UPC2	YDR213W	DAL82	P21705	255 aa		3.57	□□□□□ -1.84
UPC2	YDR213W	YIL012W	P40551	113 aa		3.57	□□□□□ -1.84
UPC2	YDR213W	YLR460C	P54007	376 aa		3.57	□□□□□ -1.84
UPC2	YDR213W	YDR114C	Q04597	100 aa		3.57	□□□□□ -1.84
UPC2	YDR213W	FCY1	Q12178	158 aa		3.57	□□□□□ -1.84
UPC2	YDR213W	IMP1	P28627	190 aa		3.56	□□□□□ -1.84
UPC2	YDR213W	RML2	P32611	393 aa		3.56	□□□□□ -1.84
UPC2	YDR213W	YOX1	P34161	385 aa		3.56	□□□□□ -1.84
UPC2	YDR213W	MOH1	P38191	138 aa		3.56	□□□□□ -1.84
UPC2	YDR213W	OSW5	P40219	148 aa		3.56	□□□□□ -1.84
UPC2	YDR213W	MSA1	Q08471	629 aa		3.56	□□□□□ -1.84
UPC2	YDR213W	ATG40	Q99325	256 aa		3.56	□□□□□ -1.84
UPC2	YDR213W	HMRA1	P0CY11	126 aa		3.56	□□□□□ -1.84
UPC2	YDR213W	BET2	P20133	325 aa		3.56	□□□□□ -1.84
UPC2	YDR213W	NHP2	P32495	156 aa	Predicted RBP	3.56	□□□□□ -1.84
UPC2	YDR213W	YPT10	P38146	199 aa		3.56	□□□□□ -1.84
UPC2	YDR213W	PET8	P38921	284 aa		3.56	□□□□□ -1.84
UPC2	YDR213W	YFR057W	P43625	151 aa		3.56	□□□□□ -1.84
UPC2	YDR213W	YGR039W	P53225	103 aa		3.56	□□□□□ -1.84
UPC2	YDR213W	ATG21	Q02887	496 aa		3.56	□□□□□ -1.84
UPC2	YDR213W	HPF1	Q05164	967 aa		3.56	□□□□□ -1.84
UPC2	YDR213W	DGA1	Q08650	418 aa		3.56	□□□□□ -1.84
UPC2	YDR213W	MPD1	Q12404	318 aa	Known RBP	3.56	□□□□□ -1.84
UPC2	YDR213W	RPL35A	P0CX84	120 aa	Known RBP	3.55	□□□□□ -1.84
UPC2	YDR213W	RPL35B	P0CX85	120 aa	Known RBP	3.55	□□□□□ -1.84
UPC2	YDR213W	SRX1	P36077	127 aa		3.55	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 24.5 ms