RNA–Protein interactions for RNA: YDR179C

CSN9, Transcript of Subunit of the Cop9 signalosome, yeastyeast

Gene CSN9, Length 489 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSN9YDR179C YMR122CQ03879 124 aa-0.67□□□□□ -2.52
CSN9YDR179C IRC19Q07843 230 aa-0.67□□□□□ -2.52
CSN9YDR179C NHP6AP11632 93 aaKnown RBP-0.68□□□□□ -2.52
CSN9YDR179C YKR041WP36134 250 aa-0.68□□□□□ -2.52
CSN9YDR179C DDR48P18899 430 aaKnown RBP-0.69□□□□□ -2.52
CSN9YDR179C POR2P40478 281 aa-0.69□□□□□ -2.52
CSN9YDR179C ATP19P81451 68 aa-0.69□□□□□ -2.52
CSN9YDR179C YPR153WQ06537 140 aa-0.69□□□□□ -2.52
CSN9YDR179C RFU1Q08003 200 aa-0.69□□□□□ -2.52
CSN9YDR179C SPA2P23201 1466 aaKnown RBP-0.69□□□□□ -2.52
CSN9YDR179C JIP3O13555 125 aa-0.7□□□□□ -2.52
CSN9YDR179C FES1P38260 290 aa-0.7□□□□□ -2.52
CSN9YDR179C GPI2P46961 280 aa-0.7□□□□□ -2.52
CSN9YDR179C CGR1P53188 120 aa-0.7□□□□□ -2.52
CSN9YDR179C URA2P07259 2214 aaKnown RBP-0.7□□□□□ -2.52
CSN9YDR179C SNO1Q03144 224 aa-0.71□□□□□ -2.52
CSN9YDR179C THI74Q04083 370 aa-0.71□□□□□ -2.52
CSN9YDR179C PEX11Q12462 236 aa-0.71□□□□□ -2.52
CSN9YDR179C SAC3P46674 1301 aa-0.71□□□□□ -2.52
CSN9YDR179C SRP21P32342 167 aa-0.72□□□□□ -2.52
CSN9YDR179C YBR013CP38215 129 aa-0.72□□□□□ -2.52
CSN9YDR179C COA4Q05809 96 aa-0.72□□□□□ -2.52
CSN9YDR179C HUT1Q12520 339 aa-0.72□□□□□ -2.52
CSN9YDR179C LAA1P39526 2014 aa-0.72□□□□□ -2.53
CSN9YDR179C SRP14P38985 146 aa-0.73□□□□□ -2.53
CSN9YDR179C LST8P41318 303 aa-0.73□□□□□ -2.53
CSN9YDR179C MIC27P50945 234 aa-0.73□□□□□ -2.53
CSN9YDR179C YNL140CP53910 189 aa-0.73□□□□□ -2.53
CSN9YDR179C YNL019CP53975 284 aa-0.73□□□□□ -2.53
CSN9YDR179C RDI1Q12434 202 aa-0.73□□□□□ -2.53
CSN9YDR179C CDC39P25655 2108 aaKnown RBP-0.74□□□□□ -2.53
CSN9YDR179C YKT6P36015 200 aaKnown RBP-0.74□□□□□ -2.53
CSN9YDR179C YDR010CQ12426 110 aa-0.74□□□□□ -2.53
CSN9YDR179C ATP5P09457 212 aa-0.75□□□□□ -2.53
CSN9YDR179C MRS4P23500 304 aa-0.75□□□□□ -2.53
CSN9YDR179C TRR1P29509 319 aaKnown RBP-0.75□□□□□ -2.53
CSN9YDR179C RME1P32338 300 aaKnown RBP-0.75□□□□□ -2.53
CSN9YDR179C TMA20P89886 181 aaPredicted RBP-0.75□□□□□ -2.53
CSN9YDR179C MRPL31P14063 131 aaPredicted RBP-0.76□□□□□ -2.53
CSN9YDR179C YJR128WP47162 119 aa-0.76□□□□□ -2.53
CSN9YDR179C YLR194CQ05777 254 aa-0.76□□□□□ -2.53
CSN9YDR179C GRE1Q08969 168 aa-0.76□□□□□ -2.53
CSN9YDR179C YLR046CQ12253 270 aa-0.76□□□□□ -2.53
CSN9YDR179C MED11Q99278 115 aa-0.76□□□□□ -2.53
CSN9YDR179C GSC2P40989 1895 aa-0.77□□□□□ -2.53
CSN9YDR179C ANB1P19211 157 aa-0.77□□□□□ -2.53
CSN9YDR179C RAD51P25454 400 aa-0.77□□□□□ -2.53
CSN9YDR179C FIP1P45976 327 aa-0.77□□□□□ -2.53
CSN9YDR179C CMD1P06787 147 aaKnown RBP-0.78□□□□□ -2.53
CSN9YDR179C YHR213WP0CI67 198 aa-0.78□□□□□ -2.53
CSN9YDR179C NMT1P14743 455 aa-0.78□□□□□ -2.53
CSN9YDR179C AUA1P32450 94 aa-0.78□□□□□ -2.53
CSN9YDR179C RRT7Q07829 113 aa-0.78□□□□□ -2.53
CSN9YDR179C YLR050CQ12155 161 aaKnown RBP-0.78□□□□□ -2.53
CSN9YDR179C YOL164W-AQ3E7A5 60 aa-0.78□□□□□ -2.53
CSN9YDR179C BNI1P41832 1953 aa-0.78□□□□□ -2.53
CSN9YDR179C YFR035CP43608 114 aa-0.79□□□□□ -2.54
CSN9YDR179C YGL101WP53144 215 aa-0.79□□□□□ -2.54
CSN9YDR179C YPD1Q07688 167 aa-0.79□□□□□ -2.54
CSN9YDR179C SCS22Q6Q595 175 aa-0.79□□□□□ -2.54
CSN9YDR179C UTP11P34247 250 aaPredicted RBP-0.8□□□□□ -2.54
CSN9YDR179C ARL3Q02804 198 aa-0.8□□□□□ -2.54
CSN9YDR179C PFY1P07274 126 aa-0.81□□□□□ -2.54
CSN9YDR179C YEA6P39953 335 aa-0.81□□□□□ -2.54
CSN9YDR179C FAS2P19097 1887 aaKnown RBP-0.82□□□□□ -2.54
CSN9YDR179C SRX1P36077 127 aa-0.82□□□□□ -2.54
CSN9YDR179C HSK3P69852 69 aa-0.82□□□□□ -2.54
CSN9YDR179C COX5BP00425 151 aa-0.83□□□□□ -2.54
CSN9YDR179C ATP7P30902 174 aa-0.83□□□□□ -2.54
CSN9YDR179C DLS1P40366 167 aa-0.83□□□□□ -2.54
CSN9YDR179C YGL193CP53097 103 aa-0.83□□□□□ -2.54
CSN9YDR179C CWC21Q03375 135 aaKnown RBP-0.83□□□□□ -2.54
CSN9YDR179C MYO1P08964 1928 aa-0.83□□□□□ -2.54
CSN9YDR179C YSF3P0C074 85 aaPredicted RBP-0.84□□□□□ -2.54
CSN9YDR179C EMP24P32803 203 aaKnown RBP-0.84□□□□□ -2.54
CSN9YDR179C YCL001W-AP87012 153 aa-0.84□□□□□ -2.54
CSN9YDR179C RPL40AP0CH08 128 aaKnown RBP-0.85□□□□□ -2.55
CSN9YDR179C RPL40BP0CH09 128 aaKnown RBP-0.85□□□□□ -2.55
CSN9YDR179C MRPL11P36521 249 aaPredicted RBP-0.85□□□□□ -2.55
CSN9YDR179C YER121WP40076 114 aa-0.85□□□□□ -2.55
CSN9YDR179C LSM3P57743 89 aaKnown RBP-0.85□□□□□ -2.55
CSN9YDR179C NAT5Q08689 176 aa-0.85□□□□□ -2.55
CSN9YDR179C ATP14Q12349 124 aa-0.85□□□□□ -2.55
CSN9YDR179C AIM4P38305 123 aaPredicted RBP-0.86□□□□□ -2.55
CSN9YDR179C VPS55P47111 140 aa-0.86□□□□□ -2.55
CSN9YDR179C FYV5P25585 152 aa-0.87□□□□□ -2.55
CSN9YDR179C BUB2P26448 306 aaPredicted RBP-0.87□□□□□ -2.55
CSN9YDR179C ORM1P53224 222 aa-0.87□□□□□ -2.55
CSN9YDR179C TIM11P81449 96 aaPredicted RBP-0.87□□□□□ -2.55
CSN9YDR179C LDB18Q07887 179 aa-0.87□□□□□ -2.55
CSN9YDR179C UBI4P0CG63 381 aaKnown RBP-0.88□□□□□ -2.55
CSN9YDR179C RPL30P14120 105 aaKnown RBP-0.88□□□□□ -2.55
CSN9YDR179C APA2P22108 325 aa-0.88□□□□□ -2.55
CSN9YDR179C SEC72P39742 193 aaKnown RBP-0.88□□□□□ -2.55
CSN9YDR179C YPL067CQ02754 198 aa-0.88□□□□□ -2.55
CSN9YDR179C COF1Q03048 143 aaKnown RBP-0.88□□□□□ -2.55
CSN9YDR179C SFT2P38166 215 aa-0.89□□□□□ -2.55
CSN9YDR179C YER181CP40097 107 aa-0.89□□□□□ -2.55
CSN9YDR179C RPS1BP23248 255 aaKnown RBP-0.9□□□□□ -2.55
CSN9YDR179C PHB1P40961 287 aa-0.9□□□□□ -2.55
Retrieved 100 of 5,963 RNA–protein pairs in 41.5 ms