RNA–Protein interactions for RNA: YDR172W

SUP35, Transcript of Translation termination factor eRF3, yeast

Gene SUP35, Length 2,058 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUP35	YDR172W	YPR063C	Q12160	140 aa		3.8	□□□□□ -1.8
SUP35	YDR172W	YLR302C	O13544	120 aa		3.8	□□□□□ -1.8
SUP35	YDR172W	POR1	P04840	283 aa	Known RBP	3.8	□□□□□ -1.8
SUP35	YDR172W	IES6	P32617	166 aa		3.8	□□□□□ -1.8
SUP35	YDR172W	LSM2	P38203	95 aa	Known RBP	3.8	□□□□□ -1.8
SUP35	YDR172W	YHL044W	P38727	235 aa		3.8	□□□□□ -1.8
SUP35	YDR172W	CYB5	P40312	120 aa		3.8	□□□□□ -1.8
SUP35	YDR172W	YGR018C	P53211	109 aa		3.8	□□□□□ -1.8
SUP35	YDR172W	CPD1	P53314	239 aa		3.8	□□□□□ -1.8
SUP35	YDR172W	APS2	Q00381	147 aa		3.8	□□□□□ -1.8
SUP35	YDR172W	CUE4	Q04201	117 aa	Predicted RBP	3.8	□□□□□ -1.8
SUP35	YDR172W	MCH1	Q07376	486 aa		3.8	□□□□□ -1.8
SUP35	YDR172W	SRP21	P32342	167 aa		3.79	□□□□□ -1.8
SUP35	YDR172W	FPR2	P32472	135 aa		3.79	□□□□□ -1.8
SUP35	YDR172W	PAM17	P36147	197 aa		3.79	□□□□□ -1.8
SUP35	YDR172W	DOG2	P38773	246 aa		3.79	□□□□□ -1.8
SUP35	YDR172W	DOG1	P38774	246 aa		3.79	□□□□□ -1.8
SUP35	YDR172W	SUR2	P38992	349 aa		3.79	□□□□□ -1.8
SUP35	YDR172W	SAS2	P40963	338 aa		3.79	□□□□□ -1.8
SUP35	YDR172W	ABM1	P47146	123 aa		3.79	□□□□□ -1.8
SUP35	YDR172W	TOM7	P53507	60 aa		3.79	□□□□□ -1.8
SUP35	YDR172W	SMT3	Q12306	101 aa	Known RBP	3.79	□□□□□ -1.8
SUP35	YDR172W	JID1	Q12350	301 aa		3.79	□□□□□ -1.8
SUP35	YDR172W	YNR034W-A	Q3E841	98 aa		3.79	□□□□□ -1.8
SUP35	YDR172W	ELF1	P36053	145 aa		3.79	□□□□□ -1.8
SUP35	YDR172W	YBL071C	P38185	102 aa		3.79	□□□□□ -1.8
SUP35	YDR172W	IRC22	P40006	225 aa		3.79	□□□□□ -1.8
SUP35	YDR172W	WWM1	P43582	211 aa	Known RBP	3.79	□□□□□ -1.8
SUP35	YDR172W	YMR166C	Q03829	368 aa		3.79	□□□□□ -1.8
SUP35	YDR172W	RUB1	Q03919	77 aa		3.79	□□□□□ -1.8
SUP35	YDR172W	RAV2	Q03956	351 aa		3.79	□□□□□ -1.8
SUP35	YDR172W	FIT2	Q08906	153 aa		3.79	□□□□□ -1.8
SUP35	YDR172W	TMA17	Q12513	150 aa		3.79	□□□□□ -1.8
SUP35	YDR172W	SPO24	Q3E752	67 aa		3.79	□□□□□ -1.8
SUP35	YDR172W	YIL134C-A	Q45U18	67 aa		3.79	□□□□□ -1.8
SUP35	YDR172W	HSP12	P22943	109 aa	Known RBP	3.78	□□□□□ -1.8
SUP35	YDR172W	SUA7	P29055	345 aa	Predicted RBP	3.78	□□□□□ -1.8
SUP35	YDR172W	LSM4	P40070	187 aa	Known RBP	3.78	□□□□□ -1.8
SUP35	YDR172W	YIL012W	P40551	113 aa		3.78	□□□□□ -1.8
SUP35	YDR172W	NCA3	P46955	337 aa		3.78	□□□□□ -1.8
SUP35	YDR172W	STD1	Q02794	444 aa		3.78	□□□□□ -1.8
SUP35	YDR172W	CSI2	Q08054	341 aa		3.78	□□□□□ -1.8
SUP35	YDR172W	IRC23	Q08416	157 aa		3.78	□□□□□ -1.8
SUP35	YDR172W	URA2	P07259	2214 aa	Known RBP	3.78	□□□□□ -1.8
SUP35	YDR172W	CUP2	P15315	225 aa		3.77	□□□□□ -1.81
SUP35	YDR172W	SFT2	P38166	215 aa		3.77	□□□□□ -1.81
SUP35	YDR172W	YHR173C	P38864	112 aa		3.77	□□□□□ -1.81
SUP35	YDR172W	OST3	P48439	350 aa		3.77	□□□□□ -1.81
SUP35	YDR172W	YIP1	P53039	248 aa		3.77	□□□□□ -1.81
SUP35	YDR172W	YOR105W	Q08504	108 aa		3.77	□□□□□ -1.81
SUP35	YDR172W	RDL1	Q12305	139 aa	Known RBP	3.77	□□□□□ -1.81
SUP35	YDR172W	QRI5	P32344	111 aa		3.77	□□□□□ -1.81
SUP35	YDR172W	YIR020C	P40575	100 aa		3.77	□□□□□ -1.81
SUP35	YDR172W	AYT1	Q12226	474 aa		3.77	□□□□□ -1.81
SUP35	YDR172W	YHR213W	P0CI67	198 aa		3.76	□□□□□ -1.81
SUP35	YDR172W	YPS1	P32329	569 aa		3.76	□□□□□ -1.81
SUP35	YDR172W	FZF1	P32805	299 aa		3.76	□□□□□ -1.81
SUP35	YDR172W	ERV14	P53173	138 aa		3.76	□□□□□ -1.81
SUP35	YDR172W	YNR071C	P53757	342 aa		3.76	□□□□□ -1.81
SUP35	YDR172W	ERG27	Q12452	347 aa	Known RBP	3.76	□□□□□ -1.81
SUP35	YDR172W	YCR024C-B	Q3E7Z8	88 aa		3.76	□□□□□ -1.81
SUP35	YDR172W	SNU13	P39990	126 aa	Known RBP	3.75	□□□□□ -1.81
SUP35	YDR172W	GLE2	P40066	365 aa		3.75	□□□□□ -1.81
SUP35	YDR172W	GZF3	P42944	551 aa	Known RBP	3.75	□□□□□ -1.81
SUP35	YDR172W	COX18	P53239	316 aa		3.75	□□□□□ -1.81
SUP35	YDR172W	HST4	P53688	370 aa		3.75	□□□□□ -1.81
SUP35	YDR172W	OCA2	P53949	197 aa		3.75	□□□□□ -1.81
SUP35	YDR172W	ADH6	Q04894	360 aa	Known RBP	3.75	□□□□□ -1.81
SUP35	YDR172W	ILV5	P06168	395 aa	Known RBP	3.75	□□□□□ -1.81
SUP35	YDR172W	SCM4	P32564	187 aa		3.75	□□□□□ -1.81
SUP35	YDR172W	YKL075C	P36083	450 aa		3.75	□□□□□ -1.81
SUP35	YDR172W	MRPL11	P36521	249 aa	Predicted RBP	3.75	□□□□□ -1.81
SUP35	YDR172W	MIX23	P38162	196 aa		3.75	□□□□□ -1.81
SUP35	YDR172W	RKI1	Q12189	258 aa		3.75	□□□□□ -1.81
SUP35	YDR172W	Q0297	Q9ZZV8	51 aa		3.75	□□□□□ -1.81
SUP35	YDR172W	PHO85	P17157	305 aa		3.74	□□□□□ -1.81
SUP35	YDR172W	VMA11	P32842	164 aa		3.74	□□□□□ -1.81
SUP35	YDR172W	TIR2	P33890	251 aa		3.74	□□□□□ -1.81
SUP35	YDR172W	MRPL38	P35996	138 aa	Predicted RBP	3.74	□□□□□ -1.81
SUP35	YDR172W	MRX11	Q03079	207 aa		3.74	□□□□□ -1.81
SUP35	YDR172W	SDH7	Q04401	133 aa		3.74	□□□□□ -1.81
SUP35	YDR172W	PBP4	Q07362	185 aa	Known RBP	3.74	□□□□□ -1.81
SUP35	YDR172W	MRS1	P07266	363 aa		3.74	□□□□□ -1.81
SUP35	YDR172W	DDI2	P0CH63	225 aa		3.74	□□□□□ -1.81
SUP35	YDR172W	DDI3	P0CH64	225 aa		3.74	□□□□□ -1.81
SUP35	YDR172W	FUN14	P18411	198 aa		3.74	□□□□□ -1.81
SUP35	YDR172W	RRT1	P38192	103 aa		3.74	□□□□□ -1.81
SUP35	YDR172W	ICS2	P38284	255 aa		3.74	□□□□□ -1.81
SUP35	YDR172W	YER134C	P40081	178 aa		3.74	□□□□□ -1.81
SUP35	YDR172W	GPP2	P40106	250 aa	Known RBP	3.74	□□□□□ -1.81
SUP35	YDR172W	YMR141C	P40211	102 aa		3.74	□□□□□ -1.81
SUP35	YDR172W	CIN5	P40917	295 aa		3.74	□□□□□ -1.81
SUP35	YDR172W	SWT21	P53873	357 aa	Predicted RBP	3.74	□□□□□ -1.81
SUP35	YDR172W	ATP19	P81451	68 aa		3.74	□□□□□ -1.81
SUP35	YDR172W	IZH1	Q03419	316 aa		3.74	□□□□□ -1.81
SUP35	YDR172W	SEC4	P07560	215 aa	Known RBP	3.73	□□□□□ -1.81
SUP35	YDR172W	TIR1	P10863	254 aa		3.73	□□□□□ -1.81
SUP35	YDR172W	RPB11	P38902	120 aa		3.73	□□□□□ -1.81
SUP35	YDR172W	TDA4	P47153	279 aa		3.73	□□□□□ -1.81
SUP35	YDR172W	TMA7	Q3E764	64 aa	Known RBP	3.73	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 28.3 ms