RNA–Protein interactions for RNA: YDR049W

VMS1, Transcript of Component of a Cdc48p-complex involved in protein quality control, yeastyeast

Gene VMS1, Length 1,899 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMS1YDR049W CDC43P18898 376 aa4.56□□□□□ -1.68
VMS1YDR049W COX10P21592 462 aa4.56□□□□□ -1.68
VMS1YDR049W VTC1P40046 129 aaRIP-Chip data4.56□□□□□ -1.68not detected
VMS1YDR049W YMR252CQ04814 134 aa4.56□□□□□ -1.68
VMS1YDR049W KEI1Q06346 221 aa4.56□□□□□ -1.68
VMS1YDR049W AYT1Q12226 474 aa4.56□□□□□ -1.68
VMS1YDR049W ATG5Q12380 294 aa4.56□□□□□ -1.68
VMS1YDR049W NAG1Q8TGN9 163 aa4.56□□□□□ -1.68
VMS1YDR049W ADH3P07246 375 aaKnown RBP4.55□□□□□ -1.68
VMS1YDR049W TEM1P38987 245 aa4.55□□□□□ -1.68
VMS1YDR049W YER134CP40081 178 aa4.55□□□□□ -1.68
VMS1YDR049W DIM1P41819 318 aaKnown RBP4.55□□□□□ -1.68
VMS1YDR049W PAM16P42949 149 aa4.55□□□□□ -1.68
VMS1YDR049W ATG18P43601 500 aa4.55□□□□□ -1.68
VMS1YDR049W CRH1P53301 507 aa4.55□□□□□ -1.68
VMS1YDR049W SAY1P53324 424 aa4.55□□□□□ -1.68
VMS1YDR049W RCE1Q03530 315 aa4.55□□□□□ -1.68
VMS1YDR049W FCF1Q05498 189 aaPredicted RBP4.55□□□□□ -1.68
VMS1YDR049W ANT1Q06497 328 aa4.55□□□□□ -1.68
VMS1YDR049W ISD11Q6Q560 94 aa4.55□□□□□ -1.68
VMS1YDR049W YEL009C-AA0A023PZF2 135 aa4.54□□□□□ -1.68
VMS1YDR049W CUP9P41817 306 aa4.54□□□□□ -1.68
VMS1YDR049W SMT3Q12306 101 aaKnown RBP4.54□□□□□ -1.68
VMS1YDR049W RPL21BQ12672 160 aaKnown RBP4.54□□□□□ -1.68
VMS1YDR049W YFL068WP0CX99 160 aa4.54□□□□□ -1.68
VMS1YDR049W YLL066W-AP0CY00 160 aa4.54□□□□□ -1.68
VMS1YDR049W YLL067W-AP0CY01 160 aa4.54□□□□□ -1.68
VMS1YDR049W ARO2P28777 376 aaKnown RBP4.54□□□□□ -1.68
VMS1YDR049W YAR068WP39564 161 aa4.54□□□□□ -1.68
VMS1YDR049W YIL059CP40520 121 aa4.54□□□□□ -1.68
VMS1YDR049W YGR164WP53291 111 aa4.54□□□□□ -1.68
VMS1YDR049W HAP3P13434 144 aa4.53□□□□□ -1.68
VMS1YDR049W NOP1P15646 327 aaKnown RBP4.53□□□□□ -1.68
VMS1YDR049W SMD1Q02260 146 aaPredicted RBP4.53□□□□□ -1.68
VMS1YDR049W YDR102CQ03864 110 aa4.53□□□□□ -1.68
VMS1YDR049W DDR48P18899 430 aaKnown RBP4.52□□□□□ -1.69
VMS1YDR049W FLO5P38894 1075 aa4.52□□□□□ -1.69
VMS1YDR049W DOC1P53068 250 aa4.52□□□□□ -1.69
VMS1YDR049W YMR244WQ04018 355 aa4.52□□□□□ -1.69
VMS1YDR049W UIP4Q08926 304 aa4.52□□□□□ -1.69
VMS1YDR049W RAD28Q12021 506 aa4.52□□□□□ -1.69
VMS1YDR049W ATX2Q12067 313 aa4.52□□□□□ -1.69
VMS1YDR049W PST1Q12355 444 aa4.52□□□□□ -1.69
VMS1YDR049W YAR023CD6VPM8 179 aa4.52□□□□□ -1.69
VMS1YDR049W SCM4P32564 187 aa4.52□□□□□ -1.69
VMS1YDR049W RPR2P40571 144 aa4.52□□□□□ -1.69
VMS1YDR049W SYM1Q06563 197 aa4.52□□□□□ -1.69
VMS1YDR049W RPL13AQ12690 199 aaPredicted RBP4.52□□□□□ -1.69
VMS1YDR049W TY4B-HP0C2J7 1802 aa4.51□□□□□ -1.69
VMS1YDR049W YCR050CP25630 102 aa4.51□□□□□ -1.69
VMS1YDR049W YEL028WP39989 153 aa4.51□□□□□ -1.69
VMS1YDR049W YFL067WP43537 175 aa4.51□□□□□ -1.69
VMS1YDR049W YFR045WP43617 309 aa4.51□□□□□ -1.69
VMS1YDR049W TY4B-JP47024 1803 aa4.51□□□□□ -1.69
VMS1YDR049W RPL21AQ02753 160 aaKnown RBP4.51□□□□□ -1.69
VMS1YDR049W GAL83Q04739 417 aa4.51□□□□□ -1.69
VMS1YDR049W FYV12Q08559 129 aa4.51□□□□□ -1.69
VMS1YDR049W JID1Q12350 301 aa4.51□□□□□ -1.69
VMS1YDR049W YPL247CQ12523 523 aa4.51□□□□□ -1.69
VMS1YDR049W MED11Q99278 115 aa4.51□□□□□ -1.69
VMS1YDR049W RPL22AP05749 121 aaKnown RBP4.5□□□□□ -1.69
VMS1YDR049W ATG10Q07879 167 aa4.5□□□□□ -1.69
VMS1YDR049W RAD6P06104 172 aa4.49□□□□□ -1.69
VMS1YDR049W CPA1P07258 411 aaKnown RBP4.49□□□□□ -1.69
VMS1YDR049W YER135CP40082 130 aa4.49□□□□□ -1.69
VMS1YDR049W SWC7Q06707 132 aa4.49□□□□□ -1.69
VMS1YDR049W YOR376W-AQ3E805 51 aa4.49□□□□□ -1.69
VMS1YDR049W MSW1P04803 379 aa4.49□□□□□ -1.69
VMS1YDR049W RAD10P06838 210 aa4.49□□□□□ -1.69
VMS1YDR049W YIL152WP40455 235 aa4.49□□□□□ -1.69
VMS1YDR049W SPG1P50088 95 aa4.49□□□□□ -1.69
VMS1YDR049W COA4Q05809 96 aa4.49□□□□□ -1.69
VMS1YDR049W YPR174CQ06616 221 aaPredicted RBP4.49□□□□□ -1.69
VMS1YDR049W ODC2Q99297 307 aa4.49□□□□□ -1.69
VMS1YDR049W RAS2P01120 322 aaKnown RBP4.48□□□□□ -1.69
VMS1YDR049W SRB6P32570 121 aa4.48□□□□□ -1.69
VMS1YDR049W YND1P40009 630 aa4.48□□□□□ -1.69
VMS1YDR049W NSA2P40078 261 aaKnown RBP4.48□□□□□ -1.69
VMS1YDR049W CCS1P40202 249 aaKnown RBP4.48□□□□□ -1.69
VMS1YDR049W YMR090WQ04304 227 aaKnown RBP4.48□□□□□ -1.69
VMS1YDR049W NDD1Q08887 554 aa4.48□□□□□ -1.69
VMS1YDR049W YPR063CQ12160 140 aa4.48□□□□□ -1.69
VMS1YDR049W YCR099CP25657 155 aa4.47□□□□□ -1.69
VMS1YDR049W PAM17P36147 197 aa4.47□□□□□ -1.69
VMS1YDR049W IPT1P38954 527 aa4.47□□□□□ -1.69
VMS1YDR049W RPL13BP40212 199 aaKnown RBP4.47□□□□□ -1.69
VMS1YDR049W TVP15Q03860 143 aa4.47□□□□□ -1.69
VMS1YDR049W FIT1Q04433 528 aa4.47□□□□□ -1.69
VMS1YDR049W YDR115WQ04598 105 aa4.47□□□□□ -1.69
VMS1YDR049W RRT7Q07829 113 aa4.47□□□□□ -1.69
VMS1YDR049W RPL9AP05738 191 aaKnown RBP4.47□□□□□ -1.69
VMS1YDR049W MRPL44P19956 98 aa4.47□□□□□ -1.69
VMS1YDR049W TMA19P35691 167 aaKnown RBP4.47□□□□□ -1.69
VMS1YDR049W YIR035CP40579 254 aa4.47□□□□□ -1.69
VMS1YDR049W RPL9BP51401 191 aaKnown RBP4.47□□□□□ -1.69
VMS1YDR049W API2Q04413 109 aa4.47□□□□□ -1.69
VMS1YDR049W CRC1Q12289 327 aa4.47□□□□□ -1.69
VMS1YDR049W TIM9O74700 87 aa4.46□□□□□ -1.7
VMS1YDR049W CLB6P32943 380 aa4.46□□□□□ -1.7
VMS1YDR049W YGL118CP53132 145 aa4.46□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 38.6 ms