RNA–Protein interactions for RNA: YDL185W

VMA1, Transcript of Subunit A of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA1, Length 3,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA1	YDL185W	YOR186W	Q08560	144 aa		3.36	□□□□□ -1.87
VMA1	YDL185W	YOR292C	Q08743	309 aa		3.36	□□□□□ -1.87
VMA1	YDL185W	YDR215C	Q12240	137 aa		3.36	□□□□□ -1.87
VMA1	YDL185W	CDC36	P06100	191 aa	Predicted RBP	3.36	□□□□□ -1.87
VMA1	YDL185W	YCR023C	P25351	611 aa		3.36	□□□□□ -1.87
VMA1	YDL185W	SFT2	P38166	215 aa		3.36	□□□□□ -1.87
VMA1	YDL185W	SEC72	P39742	193 aa	Known RBP	3.36	□□□□□ -1.87
VMA1	YDL185W	BNA2	P47125	453 aa		3.36	□□□□□ -1.87
VMA1	YDL185W	TIM18	Q08749	192 aa		3.36	□□□□□ -1.87
VMA1	YDL185W	CDC39	P25655	2108 aa	Known RBP	3.35	□□□□□ -1.87
VMA1	YDL185W	YMR316C-A	I2HB70	103 aa		3.35	□□□□□ -1.87
VMA1	YDL185W	CPT1	P17898	393 aa		3.35	□□□□□ -1.87
VMA1	YDL185W	FZF1	P32805	299 aa		3.35	□□□□□ -1.87
VMA1	YDL185W	MCH2	P36032	473 aa		3.35	□□□□□ -1.87
VMA1	YDL185W	DOG2	P38773	246 aa		3.35	□□□□□ -1.87
VMA1	YDL185W	GZF3	P42944	551 aa	Known RBP	3.35	□□□□□ -1.87
VMA1	YDL185W	ATP19	P81451	68 aa		3.35	□□□□□ -1.87
VMA1	YDL185W	YDR102C	Q03864	110 aa		3.35	□□□□□ -1.87
VMA1	YDL185W	YHM2	Q04013	314 aa		3.35	□□□□□ -1.87
VMA1	YDL185W	RPL7A	P05737	244 aa	Known RBP	3.35	□□□□□ -1.87
VMA1	YDL185W	MRS3	P10566	314 aa		3.35	□□□□□ -1.87
VMA1	YDL185W	RPL30	P14120	105 aa	Known RBP	3.35	□□□□□ -1.87
VMA1	YDL185W	CMC1	P36064	111 aa		3.35	□□□□□ -1.87
VMA1	YDL185W	CCS1	P40202	249 aa	Known RBP	3.35	□□□□□ -1.87
VMA1	YDL185W	HUA1	P40325	198 aa		3.35	□□□□□ -1.87
VMA1	YDL185W	HNT2	P49775	206 aa		3.35	□□□□□ -1.87
VMA1	YDL185W	ATG33	Q06485	197 aa		3.35	□□□□□ -1.87
VMA1	YDL185W	AIR2	Q12476	344 aa	Known RBP	3.35	□□□□□ -1.87
VMA1	YDL185W	CYR1	P08678	2026 aa	Known RBP	3.35	□□□□□ -1.87
VMA1	YDL185W	UBS1	P38290	277 aa		3.34	□□□□□ -1.87
VMA1	YDL185W	YDL218W	Q07629	317 aa		3.34	□□□□□ -1.87
VMA1	YDL185W	ERG8	P24521	451 aa		3.34	□□□□□ -1.87
VMA1	YDL185W	RPS2	P25443	254 aa	Known RBP	3.34	□□□□□ -1.87
VMA1	YDL185W	LCL3	P53153	274 aa		3.34	□□□□□ -1.87
VMA1	YDL185W	AQR1	P53943	586 aa		3.34	□□□□□ -1.87
VMA1	YDL185W	ECM18	Q04623	453 aa		3.34	□□□□□ -1.87
VMA1	YDL185W	YFH1	Q07540	174 aa		3.34	□□□□□ -1.87
VMA1	YDL185W	IRC19	Q07843	230 aa		3.34	□□□□□ -1.87
VMA1	YDL185W	YDR524C-B	Q3E6R4	66 aa		3.34	□□□□□ -1.87
VMA1	YDL185W	BOL1	Q3E793	110 aa		3.34	□□□□□ -1.87
VMA1	YDL185W	YBL112C	Q3E7Y4	105 aa		3.34	□□□□□ -1.87
VMA1	YDL185W	VAR1	P02381	398 aa		3.34	□□□□□ -1.88
VMA1	YDL185W	MXR2	P25566	168 aa		3.34	□□□□□ -1.88
VMA1	YDL185W	YKL044W	P36092	106 aa		3.34	□□□□□ -1.88
VMA1	YDL185W	YIL089W	P40500	205 aa		3.34	□□□□□ -1.88
VMA1	YDL185W	YPI1	P43587	155 aa		3.34	□□□□□ -1.88
VMA1	YDL185W	RHO5	P53879	331 aa	Known RBP	3.34	□□□□□ -1.88
VMA1	YDL185W	RAV2	Q03956	351 aa		3.34	□□□□□ -1.88
VMA1	YDL185W	YRA1	Q12159	226 aa	Known RBP	3.34	□□□□□ -1.88
VMA1	YDL185W	YPS3	Q12303	508 aa		3.34	□□□□□ -1.88
VMA1	YDL185W	YHR214C-E	Q8TGK0	99 aa		3.34	□□□□□ -1.88
VMA1	YDL185W	CYC3	P06182	269 aa		3.33	□□□□□ -1.88
VMA1	YDL185W	YIL014C-A	Q02598	104 aa		3.33	□□□□□ -1.88
VMA1	YDL185W	NUP53	Q03790	475 aa		3.33	□□□□□ -1.88
VMA1	YDL185W	DIC1	Q06143	298 aa		3.33	□□□□□ -1.88
VMA1	YDL185W	MDM35	O60200	86 aa		3.33	□□□□□ -1.88
VMA1	YDL185W	RPL35A	P0CX84	120 aa	Known RBP	3.33	□□□□□ -1.88
VMA1	YDL185W	RPL35B	P0CX85	120 aa	Known RBP	3.33	□□□□□ -1.88
VMA1	YDL185W	MRPL31	P14063	131 aa	Predicted RBP	3.33	□□□□□ -1.88
VMA1	YDL185W	YPS1	P32329	569 aa		3.33	□□□□□ -1.88
VMA1	YDL185W	NHP2	P32495	156 aa	Predicted RBP	3.33	□□□□□ -1.88
VMA1	YDL185W	YKR041W	P36134	250 aa		3.33	□□□□□ -1.88
VMA1	YDL185W	YHR173C	P38864	112 aa		3.33	□□□□□ -1.88
VMA1	YDL185W	MST28	P39552	234 aa		3.33	□□□□□ -1.88
VMA1	YDL185W	EGT2	P42835	1041 aa		3.33	□□□□□ -1.88
VMA1	YDL185W	YFR045W	P43617	309 aa		3.33	□□□□□ -1.88
VMA1	YDL185W	YJL118W	P47022	219 aa		3.33	□□□□□ -1.88
VMA1	YDL185W	HPF1	Q05164	967 aa		3.33	□□□□□ -1.88
VMA1	YDL185W	MPD1	Q12404	318 aa	Known RBP	3.33	□□□□□ -1.88
VMA1	YDL185W	HEM4	P06174	275 aa		3.32	□□□□□ -1.88
VMA1	YDL185W	PHO85	P17157	305 aa		3.32	□□□□□ -1.88
VMA1	YDL185W	HSP150	P32478	413 aa		3.32	□□□□□ -1.88
VMA1	YDL185W	OYE3	P41816	400 aa	Predicted RBP	3.32	□□□□□ -1.88
VMA1	YDL185W	TOM7	P53507	60 aa		3.32	□□□□□ -1.88
VMA1	YDL185W	MRX11	Q03079	207 aa		3.32	□□□□□ -1.88
VMA1	YDL185W	YDR042C	Q03205	200 aa		3.32	□□□□□ -1.88
VMA1	YDL185W	IRC25	Q07951	179 aa		3.32	□□□□□ -1.88
VMA1	YDL185W	BEM2	P39960	2167 aa	Known RBP	3.32	□□□□□ -1.88
VMA1	YDL185W	MDM10	P18409	493 aa		3.32	□□□□□ -1.88
VMA1	YDL185W	PET8	P38921	284 aa		3.32	□□□□□ -1.88
VMA1	YDL185W	LST8	P41318	303 aa		3.32	□□□□□ -1.88
VMA1	YDL185W	GEP3	Q08622	556 aa		3.32	□□□□□ -1.88
VMA1	YDL185W	IRA1	P18963	3092 aa		3.32	□□□□□ -1.88
VMA1	YDL185W	KRE1	P17260	313 aa		3.32	□□□□□ -1.88
VMA1	YDL185W	YEL067C	P39978	195 aa		3.32	□□□□□ -1.88
VMA1	YDL185W	SUN4	P53616	420 aa		3.32	□□□□□ -1.88
VMA1	YDL185W	YIP3	P53633	176 aa		3.32	□□□□□ -1.88
VMA1	YDL185W	GTO3	Q04806	366 aa		3.32	□□□□□ -1.88
VMA1	YDL185W	IRA2	P19158	3079 aa		3.32	□□□□□ -1.88
VMA1	YDL185W	CSH1	P38287	376 aa		3.31	□□□□□ -1.88
VMA1	YDL185W	YPL073C	P40323	161 aa		3.31	□□□□□ -1.88
VMA1	YDL185W	YHP1	Q04116	353 aa		3.31	□□□□□ -1.88
VMA1	YDL185W	LYS1	P38998	373 aa	RIP-Chip data	3.31	□□□□□ -1.88	not detected
VMA1	YDL185W	YER079W	P40052	210 aa	Known RBP	3.31	□□□□□ -1.88
VMA1	YDL185W	YAL063C-A	Q3E791	96 aa		3.31	□□□□□ -1.88
VMA1	YDL185W	HTL1	Q9URQ5	78 aa		3.31	□□□□□ -1.88
VMA1	YDL185W	RPL27B	P0C2H7	136 aa	Known RBP	3.31	□□□□□ -1.88
VMA1	YDL185W	TOM40	P23644	387 aa	Known RBP	3.31	□□□□□ -1.88
VMA1	YDL185W	MIC12	P38341	106 aa		3.31	□□□□□ -1.88
VMA1	YDL185W	YER121W	P40076	114 aa		3.31	□□□□□ -1.88

Retrieved 100 of 5,963 RNA–protein pairs in 90.1 ms