RNA–Protein interactions for RNA: YDL111C

RRP42, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP42, Length 798 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP42YDL111C YJL218WP40892 196 aaKnown RBP1.97□□□□□ -2.09
RRP42YDL111C PHB1P40961 287 aa1.97□□□□□ -2.09
RRP42YDL111C GPI2P46961 280 aa1.97□□□□□ -2.09
RRP42YDL111C YGR039WP53225 103 aa1.97□□□□□ -2.09
RRP42YDL111C CWC27Q02770 301 aa1.97□□□□□ -2.09
RRP42YDL111C RRT7Q07829 113 aa1.97□□□□□ -2.09
RRP42YDL111C DDR48P18899 430 aaKnown RBP1.96□□□□□ -2.1
RRP42YDL111C HSP12P22943 109 aaKnown RBP1.96□□□□□ -2.1
RRP42YDL111C MRS4P23500 304 aa1.96□□□□□ -2.1
RRP42YDL111C SPT14P32363 452 aa1.96□□□□□ -2.1
RRP42YDL111C SRL3P36167 246 aa1.96□□□□□ -2.1
RRP42YDL111C HHO1P53551 258 aa1.96□□□□□ -2.1
RRP42YDL111C SPC24Q04477 213 aa1.96□□□□□ -2.1
RRP42YDL111C DDP1Q99321 188 aaKnown RBP1.96□□□□□ -2.1
RRP42YDL111C ROM2P51862 1356 aaKnown RBP1.96□□□□□ -2.1
RRP42YDL111C REV3P14284 1504 aa1.96□□□□□ -2.1
RRP42YDL111C MLP2P40457 1679 aa1.96□□□□□ -2.1
RRP42YDL111C QCR8P08525 94 aa1.95□□□□□ -2.1
RRP42YDL111C SHB17P36136 271 aaKnown RBP1.95□□□□□ -2.1
RRP42YDL111C YEL067CP39978 195 aa1.95□□□□□ -2.1
RRP42YDL111C ATP19P81451 68 aa1.95□□□□□ -2.1
RRP42YDL111C EST3Q03096 181 aa1.95□□□□□ -2.1
RRP42YDL111C ATP14Q12349 124 aa1.95□□□□□ -2.1
RRP42YDL111C YNL146C-AQ3E7Z1 64 aa1.95□□□□□ -2.1
RRP42YDL111C VPS15P22219 1454 aa1.94□□□□□ -2.1
RRP42YDL111C SEN2P16658 377 aa1.94□□□□□ -2.1
RRP42YDL111C SRP21P32342 167 aa1.94□□□□□ -2.1
RRP42YDL111C YHL042WP38729 150 aa1.94□□□□□ -2.1
RRP42YDL111C CIN5P40917 295 aa1.94□□□□□ -2.1
RRP42YDL111C GEP7P53171 287 aa1.94□□□□□ -2.1
RRP42YDL111C NKP2Q06162 153 aa1.94□□□□□ -2.1
RRP42YDL111C YDL157CQ12082 118 aa1.94□□□□□ -2.1
RRP42YDL111C SCS22Q6Q595 175 aa1.94□□□□□ -2.1
RRP42YDL111C RIB3Q99258 208 aa1.94□□□□□ -2.1
RRP42YDL111C SIN3P22579 1536 aa1.94□□□□□ -2.1
RRP42YDL111C SNQ2P32568 1501 aaKnown RBP1.94□□□□□ -2.1
RRP42YDL111C GEA2P39993 1459 aaKnown RBP1.94□□□□□ -2.1
RRP42YDL111C DUR1,2P32528 1835 aaKnown RBP1.94□□□□□ -2.1
RRP42YDL111C RPS25BP0C0T4 108 aaKnown RBP1.93□□□□□ -2.1
RRP42YDL111C SUA7P29055 345 aaPredicted RBP1.93□□□□□ -2.1
RRP42YDL111C BAT2P47176 376 aaKnown RBP1.93□□□□□ -2.1
RRP42YDL111C UBC7Q02159 165 aa1.93□□□□□ -2.1
RRP42YDL111C MET31Q03081 177 aa1.93□□□□□ -2.1
RRP42YDL111C MZM1Q03429 123 aaPredicted RBP1.93□□□□□ -2.1
RRP42YDL111C YMR252CQ04814 134 aa1.93□□□□□ -2.1
RRP42YDL111C ELP6Q04868 273 aa1.93□□□□□ -2.1
RRP42YDL111C YDL241WQ07738 123 aa1.93□□□□□ -2.1
RRP42YDL111C RFU1Q08003 200 aa1.93□□□□□ -2.1
RRP42YDL111C RPS25AQ3E792 108 aaPredicted RBP1.93□□□□□ -2.1
RRP42YDL111C KRE5P22023 1365 aa1.93□□□□□ -2.1
RRP42YDL111C TY3B-IQ7LHG5 1498 aaKnown RBP1.93□□□□□ -2.1
RRP42YDL111C BPT1P14772 1559 aa1.93□□□□□ -2.1
RRP42YDL111C CAT8P39113 1433 aa1.92□□□□□ -2.1
RRP42YDL111C YSP2Q06681 1438 aa1.92□□□□□ -2.1
RRP42YDL111C HSL1P34244 1518 aa1.92□□□□□ -2.1
RRP42YDL111C GDB1Q06625 1536 aa1.92□□□□□ -2.1
RRP42YDL111C NMT1P14743 455 aa1.92□□□□□ -2.1
RRP42YDL111C AHT1P29589 182 aa1.92□□□□□ -2.1
RRP42YDL111C SUI1P32911 108 aaKnown RBP1.92□□□□□ -2.1
RRP42YDL111C ETR1P38071 380 aa1.92□□□□□ -2.1
RRP42YDL111C YBR242WP38331 238 aa1.92□□□□□ -2.1
RRP42YDL111C OCA6Q12454 224 aa1.92□□□□□ -2.1
RRP42YDL111C ADE6P38972 1358 aaKnown RBP1.92□□□□□ -2.1
RRP42YDL111C HIR3P47171 1648 aa1.91□□□□□ -2.1
RRP42YDL111C LYS2P07702 1392 aa1.91□□□□□ -2.1
RRP42YDL111C RPL22AP05749 121 aaKnown RBP1.91□□□□□ -2.1
RRP42YDL111C FPR1P20081 114 aaKnown RBP1.91□□□□□ -2.1
RRP42YDL111C NMA1Q06178 401 aaKnown RBP1.91□□□□□ -2.1
RRP42YDL111C SPC3Q12133 184 aa1.91□□□□□ -2.1
RRP42YDL111C YLR361C-AQ3E795 98 aa1.91□□□□□ -2.1
RRP42YDL111C PDR5P33302 1511 aaKnown RBP1.91□□□□□ -2.1
RRP42YDL111C GCN2P15442 1659 aa1.9□□□□□ -2.1
RRP42YDL111C SSK2P53599 1579 aa1.9□□□□□ -2.1
RRP42YDL111C IQG1Q12280 1495 aa1.9□□□□□ -2.11
RRP42YDL111C UTP11P34247 250 aaPredicted RBP1.9□□□□□ -2.11
RRP42YDL111C VMA10P48836 114 aaKnown RBP1.9□□□□□ -2.11
RRP42YDL111C RCF2P53721 224 aa1.9□□□□□ -2.11
RRP42YDL111C YNL019CP53975 284 aa1.9□□□□□ -2.11
RRP42YDL111C DYN2Q02647 92 aa1.9□□□□□ -2.11
RRP42YDL111C FMN1Q03778 218 aa1.9□□□□□ -2.11
RRP42YDL111C TY1B-DR4Q07793 1604 aa1.89□□□□□ -2.11
RRP42YDL111C YGL041W-AP0C5N3 154 aa1.89□□□□□ -2.11
RRP42YDL111C BUD23P25627 275 aaPredicted RBP1.89□□□□□ -2.11
RRP42YDL111C PRS3P38689 320 aaKnown RBP1.89□□□□□ -2.11
RRP42YDL111C YER137CP40083 148 aaKnown RBP1.89□□□□□ -2.11
RRP42YDL111C GLC8P41818 229 aa1.89□□□□□ -2.11
RRP42YDL111C APS3P47064 194 aa1.89□□□□□ -2.11
RRP42YDL111C YGR017WP53210 297 aa1.89□□□□□ -2.11
RRP42YDL111C KEI1Q06346 221 aa1.89□□□□□ -2.11
RRP42YDL111C IRC19Q07843 230 aa1.89□□□□□ -2.11
RRP42YDL111C YCF1P39109 1515 aaKnown RBP1.89□□□□□ -2.11
RRP42YDL111C PDR15Q04182 1529 aaKnown RBP1.89□□□□□ -2.11
RRP42YDL111C ARO1P08566 1588 aaKnown RBP1.89□□□□□ -2.11
RRP42YDL111C KOG1P38873 1557 aa1.89□□□□□ -2.11
RRP42YDL111C ESP1Q03018 1630 aa1.88□□□□□ -2.11
RRP42YDL111C YHR140WP38842 239 aa1.88□□□□□ -2.11
RRP42YDL111C YEL008WP40001 126 aa1.88□□□□□ -2.11
RRP42YDL111C YFL065CP43539 102 aa1.88□□□□□ -2.11
RRP42YDL111C SPG1P50088 95 aa1.88□□□□□ -2.11
RRP42YDL111C YDR278CQ05612 105 aa1.88□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 25.5 ms