RNA–Protein interactions for RNA: YCR020W-B

HTL1, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene HTL1, Length 237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HTL1YCR020W-B HPT1Q04178 221 aaKnown RBP-1.16□□□□□ -2.6
HTL1YCR020W-B MRPL24P36525 258 aaPredicted RBP-1.17□□□□□ -2.6
HTL1YCR020W-B YPR153WQ06537 140 aa-1.17□□□□□ -2.6
HTL1YCR020W-B LST8P41318 303 aa-1.18□□□□□ -2.6
HTL1YCR020W-B EMC4P53073 190 aa-1.18□□□□□ -2.6
HTL1YCR020W-B YLR194CQ05777 254 aa-1.18□□□□□ -2.6
HTL1YCR020W-B IRC19Q07843 230 aa-1.18□□□□□ -2.6
HTL1YCR020W-B GRE1Q08969 168 aa-1.18□□□□□ -2.6
HTL1YCR020W-B NHP6AP11632 93 aaKnown RBP-1.19□□□□□ -2.6
HTL1YCR020W-B SNO1Q03144 224 aa-1.19□□□□□ -2.6
HTL1YCR020W-B COA4Q05809 96 aa-1.19□□□□□ -2.6
HTL1YCR020W-B RFU1Q08003 200 aa-1.19□□□□□ -2.6
HTL1YCR020W-B POL2P21951 2222 aaKnown RBP-1.2□□□□□ -2.6
HTL1YCR020W-B YBR013CP38215 129 aa-1.2□□□□□ -2.6
HTL1YCR020W-B SHG1P38337 142 aa-1.2□□□□□ -2.6
HTL1YCR020W-B YDR102CQ03864 110 aa-1.2□□□□□ -2.6
HTL1YCR020W-B THI74Q04083 370 aa-1.21□□□□□ -2.6
HTL1YCR020W-B PEX11Q12462 236 aa-1.21□□□□□ -2.6
HTL1YCR020W-B MRS4P23500 304 aa-1.22□□□□□ -2.6
HTL1YCR020W-B FES1P38260 290 aa-1.22□□□□□ -2.6
HTL1YCR020W-B POR2P40478 281 aa-1.22□□□□□ -2.6
HTL1YCR020W-B MIC27P50945 234 aa-1.22□□□□□ -2.6
HTL1YCR020W-B JAC1P53193 184 aa-1.22□□□□□ -2.6
HTL1YCR020W-B YDR010CQ12426 110 aa-1.22□□□□□ -2.6
HTL1YCR020W-B MHF1Q3E835 90 aa-1.22□□□□□ -2.6
HTL1YCR020W-B SAC3P46674 1301 aa-1.22□□□□□ -2.61
HTL1YCR020W-B BRR2P32639 2163 aaKnown RBP-1.23□□□□□ -2.61
HTL1YCR020W-B RME1P32338 300 aaKnown RBP-1.23□□□□□ -2.61
HTL1YCR020W-B YLR046CQ12253 270 aa-1.23□□□□□ -2.61
HTL1YCR020W-B SEC16P48415 2195 aaKnown RBP-1.24□□□□□ -2.61
HTL1YCR020W-B RPB4P20433 221 aaPredicted RBP-1.24□□□□□ -2.61
HTL1YCR020W-B GPI2P46961 280 aa-1.24□□□□□ -2.61
HTL1YCR020W-B YJR128WP47162 119 aa-1.24□□□□□ -2.61
HTL1YCR020W-B KTI11Q3E840 82 aa-1.24□□□□□ -2.61
HTL1YCR020W-B YFR035CP43608 114 aa-1.25□□□□□ -2.61
HTL1YCR020W-B YNL019CP53975 284 aa-1.25□□□□□ -2.61
HTL1YCR020W-B HUT1Q12520 339 aa-1.25□□□□□ -2.61
HTL1YCR020W-B YOL164W-AQ3E7A5 60 aa-1.25□□□□□ -2.61
HTL1YCR020W-B FUN14P18411 198 aa-1.26□□□□□ -2.61
HTL1YCR020W-B RAD51P25454 400 aa-1.26□□□□□ -2.61
HTL1YCR020W-B SRP21P32342 167 aa-1.26□□□□□ -2.61
HTL1YCR020W-B PLP1Q04004 230 aa-1.26□□□□□ -2.61
HTL1YCR020W-B YHR213WP0CI67 198 aa-1.27□□□□□ -2.61
HTL1YCR020W-B MRPL31P14063 131 aaPredicted RBP-1.27□□□□□ -2.61
HTL1YCR020W-B NMT1P14743 455 aa-1.27□□□□□ -2.61
HTL1YCR020W-B SRP14P38985 146 aa-1.27□□□□□ -2.61
HTL1YCR020W-B ATP5P09457 212 aa-1.28□□□□□ -2.61
HTL1YCR020W-B RDI1Q12434 202 aa-1.28□□□□□ -2.61
HTL1YCR020W-B YKT6P36015 200 aaKnown RBP-1.29□□□□□ -2.62
HTL1YCR020W-B YGL193CP53097 103 aa-1.29□□□□□ -2.62
HTL1YCR020W-B TY4B-JP47024 1803 aa-1.29□□□□□ -2.62
HTL1YCR020W-B ANB1P19211 157 aa-1.3□□□□□ -2.62
HTL1YCR020W-B ATP19P81451 68 aa-1.3□□□□□ -2.62
HTL1YCR020W-B YET3Q07451 203 aa-1.3□□□□□ -2.62
HTL1YCR020W-B UBR1P19812 1950 aa-1.3□□□□□ -2.62
HTL1YCR020W-B APA2P22108 325 aa-1.31□□□□□ -2.62
HTL1YCR020W-B AIM4P38305 123 aaPredicted RBP-1.31□□□□□ -2.62
HTL1YCR020W-B CGR1P53188 120 aa-1.31□□□□□ -2.62
HTL1YCR020W-B YGL101WP53144 215 aa-1.32□□□□□ -2.62
HTL1YCR020W-B TMA20P89886 181 aaPredicted RBP-1.32□□□□□ -2.62
HTL1YCR020W-B COX5BP00425 151 aa-1.33□□□□□ -2.62
HTL1YCR020W-B YSF3P0C074 85 aaPredicted RBP-1.33□□□□□ -2.62
HTL1YCR020W-B RPL40AP0CH08 128 aaKnown RBP-1.33□□□□□ -2.62
HTL1YCR020W-B RPL40BP0CH09 128 aaKnown RBP-1.33□□□□□ -2.62
HTL1YCR020W-B VMA10P48836 114 aaKnown RBP-1.33□□□□□ -2.62
HTL1YCR020W-B YNL140CP53910 189 aa-1.33□□□□□ -2.62
HTL1YCR020W-B PFY1P07274 126 aa-1.34□□□□□ -2.62
HTL1YCR020W-B TRR1P29509 319 aaKnown RBP-1.34□□□□□ -2.62
HTL1YCR020W-B HSK3P69852 69 aa-1.34□□□□□ -2.62
HTL1YCR020W-B RRT7Q07829 113 aa-1.34□□□□□ -2.62
HTL1YCR020W-B TY1B-HO13535 1793 aa-1.34□□□□□ -2.62
HTL1YCR020W-B CMD1P06787 147 aaKnown RBP-1.35□□□□□ -2.63
HTL1YCR020W-B ORM1P53224 222 aa-1.35□□□□□ -2.63
HTL1YCR020W-B YRF1-3P0CX14 1859 aa-1.35□□□□□ -2.63
HTL1YCR020W-B YRF1-7P0CX15 1859 aa-1.35□□□□□ -2.63
HTL1YCR020W-B UTP11P34247 250 aaPredicted RBP-1.36□□□□□ -2.63
HTL1YCR020W-B YEA6P39953 335 aa-1.36□□□□□ -2.63
HTL1YCR020W-B SCS22Q6Q595 175 aa-1.36□□□□□ -2.63
HTL1YCR020W-B JIP3O13555 125 aa-1.37□□□□□ -2.63
HTL1YCR020W-B EMP24P32803 203 aaKnown RBP-1.37□□□□□ -2.63
HTL1YCR020W-B MRPL11P36521 249 aaPredicted RBP-1.37□□□□□ -2.63
HTL1YCR020W-B YER121WP40076 114 aa-1.37□□□□□ -2.63
HTL1YCR020W-B YLR050CQ12155 161 aaKnown RBP-1.37□□□□□ -2.63
HTL1YCR020W-B FYV5P25585 152 aa-1.38□□□□□ -2.63
HTL1YCR020W-B YNL190WP53872 204 aa-1.39□□□□□ -2.63
HTL1YCR020W-B YCL001W-AP87012 153 aa-1.39□□□□□ -2.63
HTL1YCR020W-B RPL30P14120 105 aaKnown RBP-1.4□□□□□ -2.63
HTL1YCR020W-B SRX1P36077 127 aa-1.4□□□□□ -2.63
HTL1YCR020W-B COF1Q03048 143 aaKnown RBP-1.4□□□□□ -2.63
HTL1YCR020W-B UBI4P0CG63 381 aaKnown RBP-1.41□□□□□ -2.64
HTL1YCR020W-B BUB2P26448 306 aaPredicted RBP-1.41□□□□□ -2.64
HTL1YCR020W-B YJL218WP40892 196 aaKnown RBP-1.41□□□□□ -2.64
HTL1YCR020W-B LSM3P57743 89 aaKnown RBP-1.41□□□□□ -2.64
HTL1YCR020W-B ARL3Q02804 198 aa-1.41□□□□□ -2.64
HTL1YCR020W-B ATP7P30902 174 aa-1.42□□□□□ -2.64
HTL1YCR020W-B SFT2P38166 215 aa-1.42□□□□□ -2.64
HTL1YCR020W-B DLS1P40366 167 aa-1.42□□□□□ -2.64
HTL1YCR020W-B TIM11P81449 96 aaPredicted RBP-1.42□□□□□ -2.64
HTL1YCR020W-B LCL1Q02786 101 aa-1.42□□□□□ -2.64
HTL1YCR020W-B NAT5Q08689 176 aa-1.42□□□□□ -2.64
Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms