RNA–Protein interactions for RNA: YBR106W

PHO88, Transcript of Probable membrane protein, yeastyeast

Gene PHO88, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PHO88YBR106W YGR017WP53210 297 aa2.44□□□□□ -2.02
PHO88YBR106W VPS71Q03433 280 aa2.44□□□□□ -2.02
PHO88YBR106W THI74Q04083 370 aa2.44□□□□□ -2.02
PHO88YBR106W CNL1Q06333 122 aa2.44□□□□□ -2.02
PHO88YBR106W FSF1Q12029 327 aaKnown RBP2.44□□□□□ -2.02
PHO88YBR106W YOR214CQ12282 236 aa2.44□□□□□ -2.02
PHO88YBR106W YDL012CQ12489 107 aa2.44□□□□□ -2.02
PHO88YBR106W TSC3Q3E790 80 aa2.44□□□□□ -2.02
PHO88YBR106W REP2P03872 296 aa2.43□□□□□ -2.02
PHO88YBR106W YLR156WP0CE96 114 aa2.43□□□□□ -2.02
PHO88YBR106W YLR159WP0CE97 114 aa2.43□□□□□ -2.02
PHO88YBR106W YLR161WP0CE98 114 aa2.43□□□□□ -2.02
PHO88YBR106W RPL40AP0CH08 128 aaKnown RBP2.43□□□□□ -2.02
PHO88YBR106W RPL40BP0CH09 128 aaKnown RBP2.43□□□□□ -2.02
PHO88YBR106W KRE1P17260 313 aa2.43□□□□□ -2.02
PHO88YBR106W STP22P25604 385 aa2.43□□□□□ -2.02
PHO88YBR106W SPT14P32363 452 aa2.43□□□□□ -2.02
PHO88YBR106W CLB6P32943 380 aa2.43□□□□□ -2.02
PHO88YBR106W YOR062CP36025 268 aa2.43□□□□□ -2.02
PHO88YBR106W YKR070WP36151 352 aaKnown RBP2.43□□□□□ -2.02
PHO88YBR106W ETR1P38071 380 aa2.43□□□□□ -2.02
PHO88YBR106W YPL073CP40323 161 aa2.43□□□□□ -2.02
PHO88YBR106W YFR054CP43622 192 aa2.43□□□□□ -2.02
PHO88YBR106W ARP3P47117 449 aaKnown RBP2.43□□□□□ -2.02
PHO88YBR106W PAC10P48363 199 aa2.43□□□□□ -2.02
PHO88YBR106W HHO1P53551 258 aa2.43□□□□□ -2.02
PHO88YBR106W APS2Q00381 147 aa2.43□□□□□ -2.02
PHO88YBR106W TMA23Q03525 211 aa2.43□□□□□ -2.02
PHO88YBR106W GAS3Q03655 524 aa2.43□□□□□ -2.02
PHO88YBR106W CGI121Q03705 181 aaKnown RBP2.43□□□□□ -2.02
PHO88YBR106W FCY1Q12178 158 aa2.43□□□□□ -2.02
PHO88YBR106W YLR118CQ12354 227 aa2.43□□□□□ -2.02
PHO88YBR106W MEC1P38111 2368 aa2.43□□□□□ -2.02
PHO88YBR106W RIF1P29539 1916 aa2.42□□□□□ -2.02
PHO88YBR106W HAP2P06774 265 aa2.42□□□□□ -2.02
PHO88YBR106W RPB3P16370 318 aaKnown RBP2.42□□□□□ -2.02
PHO88YBR106W SPO13P23624 291 aa2.42□□□□□ -2.02
PHO88YBR106W PTC1P35182 281 aa2.42□□□□□ -2.02
PHO88YBR106W YHR140WP38842 239 aa2.42□□□□□ -2.02
PHO88YBR106W SFT1P43682 97 aa2.42□□□□□ -2.02
PHO88YBR106W FIP1P45976 327 aa2.42□□□□□ -2.02
PHO88YBR106W RPS12P48589 143 aaKnown RBP2.42□□□□□ -2.02
PHO88YBR106W YKR005CQ02203 525 aa2.42□□□□□ -2.02
PHO88YBR106W YPR114WQ06107 315 aa2.42□□□□□ -2.02
PHO88YBR106W YPL162CQ12042 273 aa2.42□□□□□ -2.02
PHO88YBR106W BOL1Q3E793 110 aa2.42□□□□□ -2.02
PHO88YBR106W YPR014CQ6B0W2 109 aa2.42□□□□□ -2.02
PHO88YBR106W YFR032C-BQ8TGU2 87 aa2.42□□□□□ -2.02
PHO88YBR106W YLR422WQ06409 1932 aa2.42□□□□□ -2.02
PHO88YBR106W FMP49A0A023PZB3 126 aa2.41□□□□□ -2.02
PHO88YBR106W TIR1P10863 254 aa2.41□□□□□ -2.02
PHO88YBR106W SEC17P32602 292 aa2.41□□□□□ -2.02
PHO88YBR106W AIM18P38884 321 aa2.41□□□□□ -2.02
PHO88YBR106W MOB1P40484 314 aa2.41□□□□□ -2.02
PHO88YBR106W PIR5P46999 287 aa2.41□□□□□ -2.02
PHO88YBR106W YAE1P47118 141 aaPredicted RBP2.41□□□□□ -2.02
PHO88YBR106W TIM13P53299 105 aa2.41□□□□□ -2.02
PHO88YBR106W PGA1P53896 198 aa2.41□□□□□ -2.02
PHO88YBR106W SPC3Q12133 184 aa2.41□□□□□ -2.02
PHO88YBR106W MPD1Q12404 318 aaKnown RBP2.41□□□□□ -2.02
PHO88YBR106W LAA1P39526 2014 aa2.41□□□□□ -2.02
PHO88YBR106W YHR032W-AP0C5N6 59 aa2.4□□□□□ -2.03
PHO88YBR106W PHO85P17157 305 aa2.4□□□□□ -2.03
PHO88YBR106W UTP30P36144 274 aaKnown RBP2.4□□□□□ -2.03
PHO88YBR106W UMP1P38293 148 aa2.4□□□□□ -2.03
PHO88YBR106W YJL218WP40892 196 aaKnown RBP2.4□□□□□ -2.03
PHO88YBR106W APJ1P53940 528 aa2.4□□□□□ -2.03
PHO88YBR106W DAD3P69850 94 aa2.4□□□□□ -2.03
PHO88YBR106W NHP10Q03435 203 aa2.4□□□□□ -2.03
PHO88YBR106W NKP2Q06162 153 aa2.4□□□□□ -2.03
PHO88YBR106W ZEO1Q08245 113 aa2.4□□□□□ -2.03
PHO88YBR106W EMC6Q12431 108 aa2.4□□□□□ -2.03
PHO88YBR106W YNL277W-AQ3E7Z0 62 aa2.4□□□□□ -2.03
PHO88YBR106W VAR1P02381 398 aa2.39□□□□□ -2.03
PHO88YBR106W SDH4P37298 181 aa2.39□□□□□ -2.03
PHO88YBR106W YER084WP40057 128 aa2.39□□□□□ -2.03
PHO88YBR106W RIO2P40160 425 aaKnown RBP2.39□□□□□ -2.03
PHO88YBR106W DLS1P40366 167 aa2.39□□□□□ -2.03
PHO88YBR106W AIF1P52923 378 aa2.39□□□□□ -2.03
PHO88YBR106W YGR039WP53225 103 aa2.39□□□□□ -2.03
PHO88YBR106W DIG2Q03373 323 aaKnown RBP2.39□□□□□ -2.03
PHO88YBR106W MEU1Q07938 337 aaKnown RBP RIP-Chip data2.39□□□□□ -2.03not detected
PHO88YBR106W YDL180WQ12301 547 aa2.39□□□□□ -2.03
PHO88YBR106W ATP14Q12349 124 aa2.39□□□□□ -2.03
PHO88YBR106W TIM9O74700 87 aa2.38□□□□□ -2.03
PHO88YBR106W SEC59P20048 519 aa2.38□□□□□ -2.03
PHO88YBR106W SRP21P32342 167 aa2.38□□□□□ -2.03
PHO88YBR106W UTR5P32630 166 aa2.38□□□□□ -2.03
PHO88YBR106W BRR2P32639 2163 aaKnown RBP2.38□□□□□ -2.03
PHO88YBR106W YET1P35723 206 aa2.38□□□□□ -2.03
PHO88YBR106W MRPL15P36523 253 aa2.38□□□□□ -2.03
PHO88YBR106W TVP23P38962 199 aa2.38□□□□□ -2.03
PHO88YBR106W GVP36P40531 326 aaKnown RBP2.38□□□□□ -2.03
PHO88YBR106W TDA4P47153 279 aa2.38□□□□□ -2.03
PHO88YBR106W YGL193CP53097 103 aa2.38□□□□□ -2.03
PHO88YBR106W BUD25P85052 153 aa2.38□□□□□ -2.03
PHO88YBR106W AIM11P87275 137 aa2.38□□□□□ -2.03
PHO88YBR106W YDR366CP87287 132 aa2.38□□□□□ -2.03
PHO88YBR106W YMR321CQ04898 105 aa2.38□□□□□ -2.03
PHO88YBR106W YOL014WQ08110 124 aa2.38□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms