RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 C2orf15Q8WU43 125 aaKnown RBP17.98■□□□□ 0.47
PHGDH-213ENST00000641272 FAM126AQ9BYI3 521 aaPredicted RBP17.98■□□□□ 0.47
PHGDH-213ENST00000641272 PDE11AQ9HCR9 933 aa17.98■□□□□ 0.47
PHGDH-213ENST00000641272 OLFML3Q9NRN5 406 aa17.98■□□□□ 0.47
PHGDH-213ENST00000641272 PANK4Q9NVE7 773 aa17.98■□□□□ 0.47
PHGDH-213ENST00000641272 DDX43Q9NXZ2 648 aaKnown RBP17.98■□□□□ 0.47
PHGDH-213ENST00000641272 RAB23Q9ULC3 237 aa17.98■□□□□ 0.47
PHGDH-213ENST00000641272 MTMR6Q9Y217 621 aa17.98■□□□□ 0.47
PHGDH-213ENST00000641272 PTPRJQ12913 1337 aa17.98■□□□□ 0.47
PHGDH-213ENST00000641272 TADA3O75528 432 aa17.97■□□□□ 0.47
PHGDH-213ENST00000641272 TMEM191BP0C7N4 346 aa17.97■□□□□ 0.47
PHGDH-213ENST00000641272 HMGA1P17096 107 aaKnown RBP17.97■□□□□ 0.47
PHGDH-213ENST00000641272 PNPLA4P41247 253 aa17.97■□□□□ 0.47
PHGDH-213ENST00000641272 NRLP54845 237 aa17.97■□□□□ 0.47
PHGDH-213ENST00000641272 DDR2Q16832 855 aa17.97■□□□□ 0.47
PHGDH-213ENST00000641272 TXNDC8Q6A555 127 aa17.97■□□□□ 0.47
PHGDH-213ENST00000641272 PKN3Q6P5Z2 889 aa17.97■□□□□ 0.47
PHGDH-213ENST00000641272 RALGPS2Q86X27 583 aaPredicted RBP17.97■□□□□ 0.47
PHGDH-213ENST00000641272 NT5DC4Q86YG4 428 aa17.97■□□□□ 0.47
PHGDH-213ENST00000641272 SPEM1Q8N4L4 309 aa17.97■□□□□ 0.47
PHGDH-213ENST00000641272 OBP2AQ9NY56 170 aa17.97■□□□□ 0.47
PHGDH-213ENST00000641272 DLL3Q9NYJ7 618 aa17.97■□□□□ 0.47
PHGDH-213ENST00000641272 SNX9Q9Y5X1 595 aa17.97■□□□□ 0.47
PHGDH-213ENST00000641272 HELZP42694 1942 aaKnown RBP17.96■□□□□ 0.47
PHGDH-213ENST00000641272 FRMD3A2A2Y4 597 aa17.96■□□□□ 0.47
PHGDH-213ENST00000641272 HUS1O60921 280 aa17.96■□□□□ 0.47
PHGDH-213ENST00000641272 GARTP22102 1010 aa17.96■□□□□ 0.47
PHGDH-213ENST00000641272 CYP2F1P24903 491 aa17.96■□□□□ 0.47
PHGDH-213ENST00000641272 AVPR1AP37288 418 aa17.96■□□□□ 0.47
PHGDH-213ENST00000641272 NLRP12P59046 1061 aa17.96■□□□□ 0.47
PHGDH-213ENST00000641272 SPEM2Q0P670 501 aa17.96■□□□□ 0.47
PHGDH-213ENST00000641272 INTS6LQ5JSJ4 861 aaKnown RBP17.96■□□□□ 0.47
PHGDH-213ENST00000641272 ADGRF2Q8IZF7 708 aa17.96■□□□□ 0.47
PHGDH-213ENST00000641272 CMTM8Q8IZV2 173 aa17.96■□□□□ 0.47
PHGDH-213ENST00000641272 CSGALNACT2Q8N6G5 542 aa17.96■□□□□ 0.47
PHGDH-213ENST00000641272 CELF5Q8N6W0 485 aaKnown RBP17.96■□□□□ 0.47
PHGDH-213ENST00000641272 USP13Q92995 863 aaPredicted RBP17.96■□□□□ 0.47
PHGDH-213ENST00000641272 EBF3Q9H4W6 596 aa17.96■□□□□ 0.47
PHGDH-213ENST00000641272 TRPC7Q9HCX4 862 aa17.96■□□□□ 0.47
PHGDH-213ENST00000641272 HPS4Q9NQG7 708 aa17.96■□□□□ 0.47
PHGDH-213ENST00000641272 SIX4Q9UIU6 781 aa17.96■□□□□ 0.47
PHGDH-213ENST00000641272 ITGA11Q9UKX5 1188 aa17.96■□□□□ 0.47
PHGDH-213ENST00000641272 PCDHB13Q9Y5F0 798 aa17.96■□□□□ 0.47
PHGDH-213ENST00000641272 ATG2BQ96BY7 2078 aa17.95■□□□□ 0.46
PHGDH-213ENST00000641272 K7ESF4 209 aa17.95■□□□□ 0.46
PHGDH-213ENST00000641272 EXTL3O43909 919 aa17.95■□□□□ 0.46
PHGDH-213ENST00000641272 F11P03951 625 aa17.95■□□□□ 0.46
PHGDH-213ENST00000641272 ARSAP15289 507 aa17.95■□□□□ 0.46
PHGDH-213ENST00000641272 PSMC1P62191 440 aaKnown RBP17.95■□□□□ 0.46
PHGDH-213ENST00000641272 PLCB2Q00722 1185 aa17.95■□□□□ 0.46
PHGDH-213ENST00000641272 MYL7Q01449 175 aa17.95■□□□□ 0.46
PHGDH-213ENST00000641272 POU5F1Q01860 360 aaKnown RBP17.95■□□□□ 0.46
PHGDH-213ENST00000641272 SMARCB1Q12824 385 aa17.95■□□□□ 0.46
PHGDH-213ENST00000641272 CCINQ13939 588 aa17.95■□□□□ 0.46
PHGDH-213ENST00000641272 SLC39A14Q15043 492 aa17.95■□□□□ 0.46
PHGDH-213ENST00000641272 STK38Q15208 465 aa17.95■□□□□ 0.46
PHGDH-213ENST00000641272 ITPRIPL2Q3MIP1 535 aa17.95■□□□□ 0.46
PHGDH-213ENST00000641272 FOXD4L5Q5VV16 416 aaPredicted RBP17.95■□□□□ 0.46
PHGDH-213ENST00000641272 NAIF1Q69YI7 327 aaPredicted RBP17.95■□□□□ 0.46
PHGDH-213ENST00000641272 C1orf228Q6PIY5 440 aa17.95■□□□□ 0.46
PHGDH-213ENST00000641272 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.95■□□□□ 0.46
PHGDH-213ENST00000641272 GPD1LQ8N335 351 aa17.95■□□□□ 0.46
PHGDH-213ENST00000641272 LRRC52Q8N7C0 313 aa17.95■□□□□ 0.46
PHGDH-213ENST00000641272 OR5B17Q8NGF7 314 aa17.95■□□□□ 0.46
PHGDH-213ENST00000641272 CXorf38Q8TB03 319 aa17.95■□□□□ 0.46
PHGDH-213ENST00000641272 FOXD4L4Q8WXT5 416 aaPredicted RBP17.95■□□□□ 0.46
PHGDH-213ENST00000641272 GKN1Q9NS71 199 aa17.95■□□□□ 0.46
PHGDH-213ENST00000641272 THG1LQ9NWX6 298 aaKnown RBP17.95■□□□□ 0.46
PHGDH-213ENST00000641272 GTF3C4Q9UKN8 822 aa17.95■□□□□ 0.46
PHGDH-213ENST00000641272 CDV3Q9UKY7 258 aaKnown RBP17.95■□□□□ 0.46
PHGDH-213ENST00000641272 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.95■□□□□ 0.46
PHGDH-213ENST00000641272 ANAPC1Q9H1A4 1944 aa17.95■□□□□ 0.46
PHGDH-213ENST00000641272 MYO16Q9Y6X6 1858 aa17.95■□□□□ 0.46
PHGDH-213ENST00000641272 PTPRDP23468 1912 aa17.94■□□□□ 0.46
PHGDH-213ENST00000641272 KIAA1549LQ6ZVL6 1849 aa17.94■□□□□ 0.46
PHGDH-213ENST00000641272 LDHAP00338 332 aaKnown RBP17.94■□□□□ 0.46
PHGDH-213ENST00000641272 PXNP49023 591 aaPredicted RBP17.94■□□□□ 0.46
PHGDH-213ENST00000641272 MLLT6P55198 1093 aaPredicted RBP17.94■□□□□ 0.46
PHGDH-213ENST00000641272 ALCAMQ13740 583 aa17.94■□□□□ 0.46
PHGDH-213ENST00000641272 SIM2Q14190 667 aaPredicted RBP17.94■□□□□ 0.46
PHGDH-213ENST00000641272 NFE2Q16621 373 aaPredicted RBP17.94■□□□□ 0.46
PHGDH-213ENST00000641272 DGKKQ5KSL6 1271 aa17.94■□□□□ 0.46
PHGDH-213ENST00000641272 LAIR1Q6GTX8 287 aa17.94■□□□□ 0.46
PHGDH-213ENST00000641272 CBWD2Q8IUF1 395 aa17.94■□□□□ 0.46
PHGDH-213ENST00000641272 SCN4BQ8IWT1 228 aa17.94■□□□□ 0.46
PHGDH-213ENST00000641272 CCDC65Q8IXS2 484 aa17.94■□□□□ 0.46
PHGDH-213ENST00000641272 CACTINQ8WUQ7 758 aaKnown RBP17.94■□□□□ 0.46
PHGDH-213ENST00000641272 LEO1Q8WVC0 666 aaPredicted RBP17.94■□□□□ 0.46
PHGDH-213ENST00000641272 MRPS31Q92665 395 aaKnown RBP17.94■□□□□ 0.46
PHGDH-213ENST00000641272 PKMYT1Q99640 499 aa17.94■□□□□ 0.46
PHGDH-213ENST00000641272 RALGAPA1Q6GYQ0 2036 aa17.94■□□□□ 0.46
PHGDH-213ENST00000641272 GREB1Q4ZG55 1949 aa17.94■□□□□ 0.46
PHGDH-213ENST00000641272 NCOR2Q9Y618 2525 aa17.94■□□□□ 0.46
PHGDH-213ENST00000641272 OTOL1A6NHN0 477 aaPredicted RBP17.93■□□□□ 0.46
PHGDH-213ENST00000641272 HRO43593 1189 aa17.93■□□□□ 0.46
PHGDH-213ENST00000641272 STX6O43752 255 aa17.93■□□□□ 0.46
PHGDH-213ENST00000641272 CSH1P0DML2 217 aa17.93■□□□□ 0.46
PHGDH-213ENST00000641272 CSH2P0DML3 217 aa17.93■□□□□ 0.46
PHGDH-213ENST00000641272 TGM1P22735 817 aa17.93■□□□□ 0.46
PHGDH-213ENST00000641272 NASPP49321 788 aaPredicted RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms