RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 NIF3L1Q9GZT8 377 aa12.3□□□□□ -0.44
LINC00538-201ENST00000626109 DHX33Q9H6R0 707 aaKnown RBP12.3□□□□□ -0.44
LINC00538-201ENST00000626109 ARHGAP28Q9P2N2 729 aa12.3□□□□□ -0.44
LINC00538-201ENST00000626109 NFKBIL1Q9UBC1 381 aaPredicted RBP12.3□□□□□ -0.44
LINC00538-201ENST00000626109 SNX12Q9UMY4 172 aa12.3□□□□□ -0.44
LINC00538-201ENST00000626109 HCN4Q9Y3Q4 1203 aa12.3□□□□□ -0.44
LINC00538-201ENST00000626109 ARID2Q68CP9 1835 aa12.29□□□□□ -0.44
LINC00538-201ENST00000626109 GRIN2DO15399 1336 aa12.29□□□□□ -0.44
LINC00538-201ENST00000626109 GAS2O43903 313 aaKnown RBP12.29□□□□□ -0.44
LINC00538-201ENST00000626109 SRGAP2O75044 1071 aa12.29□□□□□ -0.44
LINC00538-201ENST00000626109 MAFO75444 373 aaPredicted RBP12.29□□□□□ -0.44
LINC00538-201ENST00000626109 E2F6O75461 281 aa12.29□□□□□ -0.44
LINC00538-201ENST00000626109 KRT38O76015 456 aa12.29□□□□□ -0.44
LINC00538-201ENST00000626109 C22orf31O95567 290 aa12.29□□□□□ -0.44
LINC00538-201ENST00000626109 GUCY2CP25092 1073 aa12.29□□□□□ -0.44
LINC00538-201ENST00000626109 KLRC1P26715 233 aa12.29□□□□□ -0.44
LINC00538-201ENST00000626109 POLR2BP30876 1174 aaKnown RBP12.29□□□□□ -0.44
LINC00538-201ENST00000626109 PAFAH1B1P43034 410 aa12.29□□□□□ -0.44
LINC00538-201ENST00000626109 AARSP49588 968 aaKnown RBP eCLIP12.29□□□□□ -0.44
LINC00538-201ENST00000626109 CYP27A1Q02318 531 aa12.29□□□□□ -0.44
LINC00538-201ENST00000626109 SEPT6Q14141 434 aa12.29□□□□□ -0.44
LINC00538-201ENST00000626109 MTHFD1LQ6UB35 978 aa12.29□□□□□ -0.44
LINC00538-201ENST00000626109 RRAGAQ7L523 313 aa12.29□□□□□ -0.44
LINC00538-201ENST00000626109 MMGT1Q8N4V1 131 aa12.29□□□□□ -0.44
LINC00538-201ENST00000626109 ARHGEF2Q92974 986 aaKnown RBP12.29□□□□□ -0.44
LINC00538-201ENST00000626109 NCAPGQ9BPX3 1015 aa12.29□□□□□ -0.44
LINC00538-201ENST00000626109 CRACR2AQ9BSW2 395 aa12.29□□□□□ -0.44
LINC00538-201ENST00000626109 C11orf49Q9H6J7 331 aa12.29□□□□□ -0.44
LINC00538-201ENST00000626109 FAM207AQ9NSI2 230 aaPredicted RBP12.29□□□□□ -0.44
LINC00538-201ENST00000626109 DNAAF2Q9NVR5 837 aaKnown RBP12.29□□□□□ -0.44
LINC00538-201ENST00000626109 PDP2Q9P2J9 529 aa12.29□□□□□ -0.44
LINC00538-201ENST00000626109 RNF14Q9UBS8 474 aa12.29□□□□□ -0.44
LINC00538-201ENST00000626109 RCCD1A6NED2 376 aa12.29□□□□□ -0.44
LINC00538-201ENST00000626109 ARVCFO00192 962 aa12.29□□□□□ -0.44
LINC00538-201ENST00000626109 PJA2O43164 708 aa12.29□□□□□ -0.44
LINC00538-201ENST00000626109 TBCAO75347 108 aaKnown RBP12.29□□□□□ -0.44
LINC00538-201ENST00000626109 ABLIM3O94929 683 aa12.29□□□□□ -0.44
LINC00538-201ENST00000626109 TMOD1P28289 359 aa12.29□□□□□ -0.44
LINC00538-201ENST00000626109 HOXC8P31273 242 aa12.29□□□□□ -0.44
LINC00538-201ENST00000626109 EIF4A3P38919 411 aaKnown RBP12.29□□□□□ -0.44
LINC00538-201ENST00000626109 MAGEA1P43355 309 aa12.29□□□□□ -0.44
LINC00538-201ENST00000626109 PAPOLAP51003 745 aaKnown RBP12.29□□□□□ -0.44
LINC00538-201ENST00000626109 SKOR1P84550 965 aa12.29□□□□□ -0.44
LINC00538-201ENST00000626109 CCDC40Q4G0X9 1142 aa12.29□□□□□ -0.44
LINC00538-201ENST00000626109 PREPLQ4J6C6 727 aaPredicted RBP12.29□□□□□ -0.44
LINC00538-201ENST00000626109 MAEAQ7L5Y9 396 aa12.29□□□□□ -0.44
LINC00538-201ENST00000626109 ZNF572Q7Z3I7 529 aaPredicted RBP12.29□□□□□ -0.44
LINC00538-201ENST00000626109 NECAB2Q7Z6G3 386 aa12.29□□□□□ -0.44
LINC00538-201ENST00000626109 GALNT13Q8IUC8 556 aa12.29□□□□□ -0.44
LINC00538-201ENST00000626109 METTL13Q8N6R0 699 aa12.29□□□□□ -0.44
LINC00538-201ENST00000626109 DIS3LQ8TF46 1054 aaKnown RBP12.29□□□□□ -0.44
LINC00538-201ENST00000626109 COG1Q8WTW3 980 aa12.29□□□□□ -0.44
LINC00538-201ENST00000626109 TCP11Q8WWU5 503 aa12.29□□□□□ -0.44
LINC00538-201ENST00000626109 ABHD8Q96I13 439 aa12.29□□□□□ -0.44
LINC00538-201ENST00000626109 SUGCTQ9HAC7 445 aa12.29□□□□□ -0.44
LINC00538-201ENST00000626109 ZNF304Q9HCX3 659 aa12.29□□□□□ -0.44
LINC00538-201ENST00000626109 PANK4Q9NVE7 773 aa12.29□□□□□ -0.44
LINC00538-201ENST00000626109 HYOU1Q9Y4L1 999 aa12.29□□□□□ -0.44
LINC00538-201ENST00000626109 MBLAC1A4D2B0 266 aaPredicted RBP12.28□□□□□ -0.44
LINC00538-201ENST00000626109 LRRIQ3A6PVS8 624 aaPredicted RBP12.28□□□□□ -0.44
LINC00538-201ENST00000626109 SFI1A8K8P3 1242 aa12.28□□□□□ -0.44
LINC00538-201ENST00000626109 FAM13AO94988 1023 aa12.28□□□□□ -0.44
LINC00538-201ENST00000626109 CNOT4O95628 575 aaKnown RBP12.28□□□□□ -0.44
LINC00538-201ENST00000626109 CYP2C9P11712 490 aa12.28□□□□□ -0.44
LINC00538-201ENST00000626109 KRT13P13646 458 aa12.28□□□□□ -0.44
LINC00538-201ENST00000626109 CSE1LP55060 971 aaKnown RBP12.28□□□□□ -0.44
LINC00538-201ENST00000626109 ADAM17P78536 824 aa12.28□□□□□ -0.44
LINC00538-201ENST00000626109 CBX2Q14781 532 aaPredicted RBP12.28□□□□□ -0.44
LINC00538-201ENST00000626109 ACAP1Q15027 740 aa12.28□□□□□ -0.44
LINC00538-201ENST00000626109 C11orf91Q3C1V1 193 aa12.28□□□□□ -0.44
LINC00538-201ENST00000626109 MARCH8Q5T0T0 291 aa12.28□□□□□ -0.44
LINC00538-201ENST00000626109 GDF6Q6KF10 455 aaPredicted RBP12.28□□□□□ -0.44
LINC00538-201ENST00000626109 EFCAB12Q6NXP0 572 aa12.28□□□□□ -0.44
LINC00538-201ENST00000626109 CCNI2Q6ZMN8 369 aaPredicted RBP12.28□□□□□ -0.44
LINC00538-201ENST00000626109 SDCCAG8Q86SQ7 713 aaPredicted RBP12.28□□□□□ -0.44
LINC00538-201ENST00000626109 TNIP3Q96KP6 325 aa12.28□□□□□ -0.44
LINC00538-201ENST00000626109 DMRTB1Q96MA1 342 aa12.28□□□□□ -0.44
LINC00538-201ENST00000626109 NOX5Q96PH1 765 aa12.28□□□□□ -0.44
LINC00538-201ENST00000626109 TSGA13Q96PP4 275 aa12.28□□□□□ -0.44
LINC00538-201ENST00000626109 REEP2Q9BRK0 252 aa12.28□□□□□ -0.44
LINC00538-201ENST00000626109 XPNPEP1Q9NQW7 623 aa12.28□□□□□ -0.44
LINC00538-201ENST00000626109 KLHL11Q9NVR0 708 aa12.28□□□□□ -0.44
LINC00538-201ENST00000626109 ARHGAP20Q9P2F6 1191 aa12.28□□□□□ -0.44
LINC00538-201ENST00000626109 PRKAG3Q9UGI9 489 aa12.28□□□□□ -0.44
LINC00538-201ENST00000626109 GPR52Q9Y2T5 361 aa12.28□□□□□ -0.44
LINC00538-201ENST00000626109 MROH7Q68CQ1 1323 aa12.28□□□□□ -0.44
LINC00538-201ENST00000626109 IGKV6-21A0A0C4DH24 114 aa12.27□□□□□ -0.44
LINC00538-201ENST00000626109 NPHP3-ACAD11A0A0J9YXS1 232 aa12.27□□□□□ -0.44
LINC00538-201ENST00000626109 E2F8A0AVK6 867 aa12.27□□□□□ -0.44
LINC00538-201ENST00000626109 LRRC53A6NM62 1247 aa12.27□□□□□ -0.44
LINC00538-201ENST00000626109 CD46P15529 392 aa12.27□□□□□ -0.44
LINC00538-201ENST00000626109 XPAP23025 273 aaPredicted RBP12.27□□□□□ -0.44
LINC00538-201ENST00000626109 ATN1P54259 1190 aaPredicted RBP12.27□□□□□ -0.44
LINC00538-201ENST00000626109 ZNF200P98182 395 aaPredicted RBP12.27□□□□□ -0.44
LINC00538-201ENST00000626109 CACNB1Q02641 598 aaPredicted RBP12.27□□□□□ -0.44
LINC00538-201ENST00000626109 COASYQ13057 564 aa12.27□□□□□ -0.44
LINC00538-201ENST00000626109 GIT2Q14161 759 aa12.27□□□□□ -0.44
LINC00538-201ENST00000626109 PTGISQ16647 500 aa12.27□□□□□ -0.44
LINC00538-201ENST00000626109 FAM26FQ5R3K3 315 aa12.27□□□□□ -0.44
LINC00538-201ENST00000626109 SFMBT2Q5VUG0 894 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms