RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 SYCP3Q8IZU3 236 aa12.02□□□□□ -0.49
TARDBP-221ENST00000619555 PDCL2Q8N4E4 241 aa12.02□□□□□ -0.49
TARDBP-221ENST00000619555 C1orf127Q8N9H9 656 aa12.02□□□□□ -0.49
TARDBP-221ENST00000619555 BPIFB1Q8TDL5 484 aa12.02□□□□□ -0.49
TARDBP-221ENST00000619555 NOC3LQ8WTT2 800 aaKnown RBP12.02□□□□□ -0.49
TARDBP-221ENST00000619555 C2orf15Q8WU43 125 aaKnown RBP12.02□□□□□ -0.49
TARDBP-221ENST00000619555 MSANTD3Q96H12 275 aa12.02□□□□□ -0.49
TARDBP-221ENST00000619555 ZNF560Q96MR9 790 aa12.02□□□□□ -0.49
TARDBP-221ENST00000619555 ZNF396Q96N95 335 aaPredicted RBP12.02□□□□□ -0.49
TARDBP-221ENST00000619555 GCNAQ96QF7 691 aa12.02□□□□□ -0.49
TARDBP-221ENST00000619555 CBWD1Q9BRT8 395 aa12.02□□□□□ -0.49
TARDBP-221ENST00000619555 IER2Q9BTL4 223 aa12.02□□□□□ -0.49
TARDBP-221ENST00000619555 PI4K2AQ9BTU6 479 aa12.02□□□□□ -0.49
TARDBP-221ENST00000619555 PCIF1Q9H4Z3 704 aa12.02□□□□□ -0.49
TARDBP-221ENST00000619555 C2orf42Q9NWW7 574 aa12.02□□□□□ -0.49
TARDBP-221ENST00000619555 OBP2AQ9NY56 170 aa12.02□□□□□ -0.49
TARDBP-221ENST00000619555 DLL3Q9NYJ7 618 aa12.02□□□□□ -0.49
TARDBP-221ENST00000619555 L1RE1Q9UN81 338 aa12.02□□□□□ -0.49
TARDBP-221ENST00000619555 PCDHB5Q9Y5E4 795 aa12.02□□□□□ -0.49
TARDBP-221ENST00000619555 PCDHB13Q9Y5F0 798 aa12.02□□□□□ -0.49
TARDBP-221ENST00000619555 CNOT1A5YKK6 2376 aaKnown RBP12.02□□□□□ -0.49
TARDBP-221ENST00000619555 FRMD3A2A2Y4 597 aa12.01□□□□□ -0.49
TARDBP-221ENST00000619555 CHURC1-FNTBB4DL54 471 aa12.01□□□□□ -0.49
TARDBP-221ENST00000619555 SPTLC2O15270 562 aa12.01□□□□□ -0.49
TARDBP-221ENST00000619555 PRPF40AO75400 957 aaKnown RBP12.01□□□□□ -0.49
TARDBP-221ENST00000619555 F11P03951 625 aa12.01□□□□□ -0.49
TARDBP-221ENST00000619555 ITGB3P05106 788 aa12.01□□□□□ -0.49
TARDBP-221ENST00000619555 GARTP22102 1010 aa12.01□□□□□ -0.49
TARDBP-221ENST00000619555 TGM1P22735 817 aa12.01□□□□□ -0.49
TARDBP-221ENST00000619555 ACAT1P24752 427 aaKnown RBP12.01□□□□□ -0.49
TARDBP-221ENST00000619555 PNPLA4P41247 253 aa12.01□□□□□ -0.49
TARDBP-221ENST00000619555 FNTBP49356 437 aa12.01□□□□□ -0.49
TARDBP-221ENST00000619555 NRLP54845 237 aa12.01□□□□□ -0.49
TARDBP-221ENST00000619555 NLRP12P59046 1061 aa12.01□□□□□ -0.49
TARDBP-221ENST00000619555 TSPY1Q01534 308 aa12.01□□□□□ -0.49
TARDBP-221ENST00000619555 SMARCB1Q12824 385 aa12.01□□□□□ -0.49
TARDBP-221ENST00000619555 BFSP1Q12934 665 aa12.01□□□□□ -0.49
TARDBP-221ENST00000619555 LRRC32Q14392 662 aa12.01□□□□□ -0.49
TARDBP-221ENST00000619555 OSTM1Q86WC4 334 aa12.01□□□□□ -0.49
TARDBP-221ENST00000619555 RALGPS2Q86X27 583 aaPredicted RBP12.01□□□□□ -0.49
TARDBP-221ENST00000619555 SPEM1Q8N4L4 309 aa12.01□□□□□ -0.49
TARDBP-221ENST00000619555 CSGALNACT2Q8N6G5 542 aa12.01□□□□□ -0.49
TARDBP-221ENST00000619555 PDILTQ8N807 584 aa12.01□□□□□ -0.49
TARDBP-221ENST00000619555 CXorf38Q8TB03 319 aa12.01□□□□□ -0.49
TARDBP-221ENST00000619555 CACTINQ8WUQ7 758 aaKnown RBP12.01□□□□□ -0.49
TARDBP-221ENST00000619555 PDE11AQ9HCR9 933 aa12.01□□□□□ -0.49
TARDBP-221ENST00000619555 OLFML3Q9NRN5 406 aa12.01□□□□□ -0.49
TARDBP-221ENST00000619555 GKN1Q9NS71 199 aa12.01□□□□□ -0.49
TARDBP-221ENST00000619555 PANK4Q9NVE7 773 aa12.01□□□□□ -0.49
TARDBP-221ENST00000619555 RBAKQ9NYW8 714 aaPredicted RBP12.01□□□□□ -0.49
TARDBP-221ENST00000619555 CCL26Q9Y258 94 aa12.01□□□□□ -0.49
TARDBP-221ENST00000619555 RALGAPA1Q6GYQ0 2036 aa12□□□□□ -0.49
TARDBP-221ENST00000619555 HRO43593 1189 aa12□□□□□ -0.49
TARDBP-221ENST00000619555 HCRTO43612 131 aa12□□□□□ -0.49
TARDBP-221ENST00000619555 EXTL3O43909 919 aa12□□□□□ -0.49
TARDBP-221ENST00000619555 HUS1O60921 280 aa12□□□□□ -0.49
TARDBP-221ENST00000619555 PPP6R2O75170 966 aa12□□□□□ -0.49
TARDBP-221ENST00000619555 LDHAP00338 332 aaKnown RBP12□□□□□ -0.49
TARDBP-221ENST00000619555 KRT19P08727 400 aa12□□□□□ -0.49
TARDBP-221ENST00000619555 CYP2F1P24903 491 aa12□□□□□ -0.49
TARDBP-221ENST00000619555 PLCB2Q00722 1185 aa12□□□□□ -0.49
TARDBP-221ENST00000619555 SRSF5Q13243 272 aaKnown RBP12□□□□□ -0.49
TARDBP-221ENST00000619555 PPP2R5DQ14738 602 aa12□□□□□ -0.49
TARDBP-221ENST00000619555 DDR2Q16832 855 aa12□□□□□ -0.49
TARDBP-221ENST00000619555 CCDC142Q17RM4 750 aa12□□□□□ -0.49
TARDBP-221ENST00000619555 DGKKQ5KSL6 1271 aa12□□□□□ -0.49
TARDBP-221ENST00000619555 LMBRD2Q68DH5 695 aaPredicted RBP12□□□□□ -0.49
TARDBP-221ENST00000619555 TXNDC8Q6A555 127 aa12□□□□□ -0.49
TARDBP-221ENST00000619555 HEATR6Q6AI08 1181 aaKnown RBP12□□□□□ -0.49
TARDBP-221ENST00000619555 C1orf228Q6PIY5 440 aa12□□□□□ -0.49
TARDBP-221ENST00000619555 CMTM8Q8IZV2 173 aa12□□□□□ -0.49
TARDBP-221ENST00000619555 CELF5Q8N6W0 485 aaKnown RBP12□□□□□ -0.49
TARDBP-221ENST00000619555 MAB21L3Q8N8X9 362 aa12□□□□□ -0.49
TARDBP-221ENST00000619555 GLIS3Q8NEA6 775 aa12□□□□□ -0.49
TARDBP-221ENST00000619555 SECISBP2LQ93073 1101 aaKnown RBP12□□□□□ -0.49
TARDBP-221ENST00000619555 HPS3Q969F9 1004 aa12□□□□□ -0.49
TARDBP-221ENST00000619555 PARD6AQ9NPB6 346 aa12□□□□□ -0.49
TARDBP-221ENST00000619555 DDX43Q9NXZ2 648 aaKnown RBP12□□□□□ -0.49
TARDBP-221ENST00000619555 SIX4Q9UIU6 781 aa12□□□□□ -0.49
TARDBP-221ENST00000619555 GMEB2Q9UKD1 530 aa12□□□□□ -0.49
TARDBP-221ENST00000619555 USP18Q9UMW8 372 aa12□□□□□ -0.49
TARDBP-221ENST00000619555 MAGED2Q9UNF1 606 aaPredicted RBP12□□□□□ -0.49
TARDBP-221ENST00000619555 K7ESF4 209 aa11.99□□□□□ -0.49
TARDBP-221ENST00000619555 RBP5P82980 135 aa11.99□□□□□ -0.49
TARDBP-221ENST00000619555 MYL7Q01449 175 aa11.99□□□□□ -0.49
TARDBP-221ENST00000619555 ALCAMQ13740 583 aa11.99□□□□□ -0.49
TARDBP-221ENST00000619555 CCINQ13939 588 aa11.99□□□□□ -0.49
TARDBP-221ENST00000619555 NFE2Q16621 373 aaPredicted RBP11.99□□□□□ -0.49
TARDBP-221ENST00000619555 ITPRIPL2Q3MIP1 535 aa11.99□□□□□ -0.49
TARDBP-221ENST00000619555 INTS6LQ5JSJ4 861 aaKnown RBP11.99□□□□□ -0.49
TARDBP-221ENST00000619555 TRIM68Q6AZZ1 485 aa11.99□□□□□ -0.49
TARDBP-221ENST00000619555 SHC4Q6S5L8 630 aa11.99□□□□□ -0.49
TARDBP-221ENST00000619555 PRR23BQ6ZRT6 265 aa11.99□□□□□ -0.49
TARDBP-221ENST00000619555 GPR161Q8N6U8 529 aaKnown RBP11.99□□□□□ -0.49
TARDBP-221ENST00000619555 LRRC52Q8N7C0 313 aa11.99□□□□□ -0.49
TARDBP-221ENST00000619555 RIN3Q8TB24 985 aa11.99□□□□□ -0.49
TARDBP-221ENST00000619555 USP13Q92995 863 aaPredicted RBP11.99□□□□□ -0.49
TARDBP-221ENST00000619555 PKMYT1Q99640 499 aa11.99□□□□□ -0.49
TARDBP-221ENST00000619555 FAM83CQ9BQN1 747 aa11.99□□□□□ -0.49
TARDBP-221ENST00000619555 ACBD6Q9BR61 282 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms