RNA–Protein interactions for RNA: ENST00000602263.5

FARP1-240, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, human

TSL 5

Gene FARP1, Length 867 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FARP1-240	ENST00000602263	TNK2	Q07912	1038 aa		11.26	□□□□□ -0.61
FARP1-240	ENST00000602263	SPEM2	Q0P670	501 aa		11.26	□□□□□ -0.61
FARP1-240	ENST00000602263	GAS6	Q14393	721 aa		11.26	□□□□□ -0.61
FARP1-240	ENST00000602263	CC2D1A	Q6P1N0	951 aa	Predicted RBP	11.26	□□□□□ -0.61
FARP1-240	ENST00000602263	CRELD2	Q6UXH1	353 aa	Predicted RBP	11.26	□□□□□ -0.61
FARP1-240	ENST00000602263	CEP68	Q76N32	757 aa		11.26	□□□□□ -0.61
FARP1-240	ENST00000602263	LRRTM3	Q86VH5	581 aa		11.26	□□□□□ -0.61
FARP1-240	ENST00000602263	CMTM8	Q8IZV2	173 aa		11.26	□□□□□ -0.61
FARP1-240	ENST00000602263	TMEM86A	Q8N2M4	240 aa		11.26	□□□□□ -0.61
FARP1-240	ENST00000602263	LRRC52	Q8N7C0	313 aa		11.26	□□□□□ -0.61
FARP1-240	ENST00000602263	MAB21L3	Q8N8X9	362 aa		11.26	□□□□□ -0.61
FARP1-240	ENST00000602263	NOC3L	Q8WTT2	800 aa	Known RBP	11.26	□□□□□ -0.61
FARP1-240	ENST00000602263	MRPS31	Q92665	395 aa	Known RBP	11.26	□□□□□ -0.61
FARP1-240	ENST00000602263	SAAL1	Q96ER3	474 aa		11.26	□□□□□ -0.61
FARP1-240	ENST00000602263	LRRC3B	Q96PB8	259 aa		11.26	□□□□□ -0.61
FARP1-240	ENST00000602263	RTKN	Q9BST9	563 aa		11.26	□□□□□ -0.61
FARP1-240	ENST00000602263	PI4K2A	Q9BTU6	479 aa		11.26	□□□□□ -0.61
FARP1-240	ENST00000602263	SLC46A2	Q9BY10	475 aa		11.26	□□□□□ -0.61
FARP1-240	ENST00000602263	IKZF4	Q9H2S9	585 aa		11.26	□□□□□ -0.61
FARP1-240	ENST00000602263	PARD6A	Q9NPB6	346 aa		11.26	□□□□□ -0.61
FARP1-240	ENST00000602263	OLFML3	Q9NRN5	406 aa		11.26	□□□□□ -0.61
FARP1-240	ENST00000602263	UXT	Q9UBK9	157 aa	Predicted RBP	11.26	□□□□□ -0.61
FARP1-240	ENST00000602263	FBXO2	Q9UK22	296 aa	Predicted RBP	11.26	□□□□□ -0.61
FARP1-240	ENST00000602263	MAGED2	Q9UNF1	606 aa	Predicted RBP	11.26	□□□□□ -0.61
FARP1-240	ENST00000602263	AGAP1	Q9UPQ3	857 aa		11.26	□□□□□ -0.61
FARP1-240	ENST00000602263	SRPRB	Q9Y5M8	271 aa	Known RBP	11.26	□□□□□ -0.61
FARP1-240	ENST00000602263	PTPRD	P23468	1912 aa		11.25	□□□□□ -0.61
FARP1-240	ENST00000602263	EML5	Q05BV3	1969 aa		11.25	□□□□□ -0.61
FARP1-240	ENST00000602263	MYMK	A6NI61	221 aa		11.25	□□□□□ -0.61
FARP1-240	ENST00000602263	SOBP	A7XYQ1	873 aa		11.25	□□□□□ -0.61
FARP1-240	ENST00000602263		K7ESF4	209 aa		11.25	□□□□□ -0.61
FARP1-240	ENST00000602263	EXTL3	O43909	919 aa		11.25	□□□□□ -0.61
FARP1-240	ENST00000602263	ITGB3	P05106	788 aa		11.25	□□□□□ -0.61
FARP1-240	ENST00000602263	KRT19	P08727	400 aa		11.25	□□□□□ -0.61
FARP1-240	ENST00000602263	TMEM191B	P0C7N4	346 aa		11.25	□□□□□ -0.61
FARP1-240	ENST00000602263	GART	P22102	1010 aa		11.25	□□□□□ -0.61
FARP1-240	ENST00000602263	ATXN1	P54253	815 aa	Known RBP	11.25	□□□□□ -0.61
FARP1-240	ENST00000602263	NLRP12	P59046	1061 aa		11.25	□□□□□ -0.61
FARP1-240	ENST00000602263	CEBPZ	Q03701	1054 aa	Known RBP	11.25	□□□□□ -0.61
FARP1-240	ENST00000602263	GRSF1	Q12849	480 aa	Known RBP eCLIP	11.25	□□□□□ -0.61
FARP1-240	ENST00000602263	CCIN	Q13939	588 aa		11.25	□□□□□ -0.61
FARP1-240	ENST00000602263	INTS6L	Q5JSJ4	861 aa	Known RBP	11.25	□□□□□ -0.61
FARP1-240	ENST00000602263	STXBP4	Q6ZWJ1	553 aa		11.25	□□□□□ -0.61
FARP1-240	ENST00000602263	PDCL2	Q8N4E4	241 aa		11.25	□□□□□ -0.61
FARP1-240	ENST00000602263	NETO1	Q8TDF5	533 aa		11.25	□□□□□ -0.61
FARP1-240	ENST00000602263	LEO1	Q8WVC0	666 aa	Predicted RBP	11.25	□□□□□ -0.61
FARP1-240	ENST00000602263	EXOC4	Q96A65	974 aa		11.25	□□□□□ -0.61
FARP1-240	ENST00000602263	DNAJC19	Q96DA6	116 aa		11.25	□□□□□ -0.61
FARP1-240	ENST00000602263	ACBD6	Q9BR61	282 aa		11.25	□□□□□ -0.61
FARP1-240	ENST00000602263	STRA6	Q9BX79	667 aa		11.25	□□□□□ -0.61
FARP1-240	ENST00000602263	TMEM206	Q9H813	350 aa		11.25	□□□□□ -0.61
FARP1-240	ENST00000602263	ABCB6	Q9NP58	842 aa		11.25	□□□□□ -0.61
FARP1-240	ENST00000602263	GKN1	Q9NS71	199 aa		11.25	□□□□□ -0.61
FARP1-240	ENST00000602263	DDX43	Q9NXZ2	648 aa	Known RBP	11.25	□□□□□ -0.61
FARP1-240	ENST00000602263	ITGA11	Q9UKX5	1188 aa		11.25	□□□□□ -0.61
FARP1-240	ENST00000602263	L1RE1	Q9UN81	338 aa		11.25	□□□□□ -0.61
FARP1-240	ENST00000602263	MYO16	Q9Y6X6	1858 aa		11.25	□□□□□ -0.61
FARP1-240	ENST00000602263	CHD8	Q9HCK8	2581 aa		11.24	□□□□□ -0.61
FARP1-240	ENST00000602263	HR	O43593	1189 aa		11.24	□□□□□ -0.61
FARP1-240	ENST00000602263	FOXD2	O60548	495 aa	Predicted RBP	11.24	□□□□□ -0.61
FARP1-240	ENST00000602263	ATG13	O75143	517 aa		11.24	□□□□□ -0.61
FARP1-240	ENST00000602263	F11	P03951	625 aa		11.24	□□□□□ -0.61
FARP1-240	ENST00000602263	HMGA1	P17096	107 aa	Known RBP	11.24	□□□□□ -0.61
FARP1-240	ENST00000602263	TGM1	P22735	817 aa		11.24	□□□□□ -0.61
FARP1-240	ENST00000602263	PCSK1	P29120	753 aa		11.24	□□□□□ -0.61
FARP1-240	ENST00000602263	HOXA6	P31267	233 aa		11.24	□□□□□ -0.61
FARP1-240	ENST00000602263	GPR15	P49685	360 aa		11.24	□□□□□ -0.61
FARP1-240	ENST00000602263	RBP5	P82980	135 aa		11.24	□□□□□ -0.61
FARP1-240	ENST00000602263	DMWD	Q09019	674 aa		11.24	□□□□□ -0.61
FARP1-240	ENST00000602263	KCNA1	Q09470	495 aa		11.24	□□□□□ -0.61
FARP1-240	ENST00000602263	SRSF5	Q13243	272 aa	Known RBP	11.24	□□□□□ -0.61
FARP1-240	ENST00000602263	CUL4A	Q13619	759 aa		11.24	□□□□□ -0.61
FARP1-240	ENST00000602263	RUNX3	Q13761	415 aa		11.24	□□□□□ -0.61
FARP1-240	ENST00000602263	PDGFRL	Q15198	375 aa		11.24	□□□□□ -0.61
FARP1-240	ENST00000602263	MON1A	Q86VX9	555 aa		11.24	□□□□□ -0.61
FARP1-240	ENST00000602263	WDR5B	Q86VZ2	330 aa		11.24	□□□□□ -0.61
FARP1-240	ENST00000602263	SPATA2L	Q8IUW3	424 aa	Predicted RBP	11.24	□□□□□ -0.61
FARP1-240	ENST00000602263	CCDC65	Q8IXS2	484 aa		11.24	□□□□□ -0.61
FARP1-240	ENST00000602263	ADGRF2	Q8IZF7	708 aa		11.24	□□□□□ -0.61
FARP1-240	ENST00000602263	CSGALNACT2	Q8N6G5	542 aa		11.24	□□□□□ -0.61
FARP1-240	ENST00000602263	C1orf127	Q8N9H9	656 aa		11.24	□□□□□ -0.61
FARP1-240	ENST00000602263	SPATA18	Q8TC71	538 aa		11.24	□□□□□ -0.61
FARP1-240	ENST00000602263	USP13	Q92995	863 aa	Predicted RBP	11.24	□□□□□ -0.61
FARP1-240	ENST00000602263	CLIC6	Q96NY7	704 aa		11.24	□□□□□ -0.61
FARP1-240	ENST00000602263	TDP1	Q9NUW8	608 aa		11.24	□□□□□ -0.61
FARP1-240	ENST00000602263	PANK4	Q9NVE7	773 aa		11.24	□□□□□ -0.61
FARP1-240	ENST00000602263	TMLHE	Q9NVH6	421 aa		11.24	□□□□□ -0.61
FARP1-240	ENST00000602263	KIAA1549L	Q6ZVL6	1849 aa		11.23	□□□□□ -0.61
FARP1-240	ENST00000602263	MYH10	P35580	1976 aa		11.23	□□□□□ -0.61
FARP1-240	ENST00000602263	TRAV19	A0A0A6YYK7	116 aa		11.23	□□□□□ -0.61
FARP1-240	ENST00000602263	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	11.23	□□□□□ -0.61
FARP1-240	ENST00000602263	GOLGA8IP	A6NC78	632 aa		11.23	□□□□□ -0.61
FARP1-240	ENST00000602263	GOLGA8J	A6NMD2	632 aa		11.23	□□□□□ -0.61
FARP1-240	ENST00000602263	KIAA0391	O15091	583 aa	Known RBP	11.23	□□□□□ -0.61
FARP1-240	ENST00000602263	ACAT1	P24752	427 aa	Known RBP	11.23	□□□□□ -0.61
FARP1-240	ENST00000602263	LHX1	P48742	406 aa		11.23	□□□□□ -0.61
FARP1-240	ENST00000602263	CASP5	P51878	434 aa		11.23	□□□□□ -0.61
FARP1-240	ENST00000602263	WNT7B	P56706	349 aa		11.23	□□□□□ -0.61
FARP1-240	ENST00000602263	MYO1E	Q12965	1108 aa		11.23	□□□□□ -0.61
FARP1-240	ENST00000602263	REST	Q13127	1097 aa		11.23	□□□□□ -0.61

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