RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 KLHDC7AQ5VTJ3 777 aa20.86■□□□□ 0.93
CIRBP-220ENST00000588917 FAM171BQ6P995 826 aa20.86■□□□□ 0.93
CIRBP-220ENST00000588917 KREMEN2Q8NCW0 462 aa20.86■□□□□ 0.93
CIRBP-220ENST00000588917 MYCBPAPQ8TBZ2 947 aa20.86■□□□□ 0.93
CIRBP-220ENST00000588917 SPPL2BQ8TCT7 592 aa20.86■□□□□ 0.93
CIRBP-220ENST00000588917 PABPC5Q96DU9 382 aaKnown RBP20.86■□□□□ 0.93
CIRBP-220ENST00000588917 GTF3C4Q9UKN8 822 aa20.86■□□□□ 0.93
CIRBP-220ENST00000588917 PCDHB5Q9Y5E4 795 aa20.86■□□□□ 0.93
CIRBP-220ENST00000588917 A0A1W2PQC6 194 aa20.85■□□□□ 0.93
CIRBP-220ENST00000588917 HOXB8P17481 243 aaPredicted RBP20.85■□□□□ 0.93
CIRBP-220ENST00000588917 ACAT1P24752 427 aaKnown RBP20.85■□□□□ 0.93
CIRBP-220ENST00000588917 TUFMP49411 452 aaKnown RBP20.85■□□□□ 0.93
CIRBP-220ENST00000588917 COL19A1Q14993 1142 aa20.85■□□□□ 0.93
CIRBP-220ENST00000588917 SYCP1Q15431 976 aa20.85■□□□□ 0.93
CIRBP-220ENST00000588917 CTC1Q2NKJ3 1217 aa20.85■□□□□ 0.93
CIRBP-220ENST00000588917 LIN9Q5TKA1 542 aa20.85■□□□□ 0.93
CIRBP-220ENST00000588917 RNF19BQ6ZMZ0 732 aa20.85■□□□□ 0.93
CIRBP-220ENST00000588917 ARHGEF19Q8IW93 802 aa20.85■□□□□ 0.93
CIRBP-220ENST00000588917 TCEAL8Q8IYN2 117 aa20.85■□□□□ 0.93
CIRBP-220ENST00000588917 B3GALNT2Q8NCR0 500 aa20.85■□□□□ 0.93
CIRBP-220ENST00000588917 NEK11Q8NG66 645 aa20.85■□□□□ 0.93
CIRBP-220ENST00000588917 TMEM176AQ96HP8 235 aa20.85■□□□□ 0.93
CIRBP-220ENST00000588917 FUBP3Q96I24 572 aaKnown RBP eCLIP20.85■□□□□ 0.93
CIRBP-220ENST00000588917 NAP1L5Q96NT1 182 aaPredicted RBP20.85■□□□□ 0.93
CIRBP-220ENST00000588917 LSM14BQ9BX40 385 aaKnown RBP20.85■□□□□ 0.93
CIRBP-220ENST00000588917 DNAJC12Q9UKB3 198 aa20.85■□□□□ 0.93
CIRBP-220ENST00000588917 PCDHB4Q9Y5E5 795 aa20.85■□□□□ 0.93
CIRBP-220ENST00000588917 SPDYE4A6NLX3 237 aa20.84■□□□□ 0.93
CIRBP-220ENST00000588917 PRRG1O14668 218 aa20.84■□□□□ 0.93
CIRBP-220ENST00000588917 OR4Q2P0C623 313 aa20.84■□□□□ 0.93
CIRBP-220ENST00000588917 EPCAMP16422 314 aa20.84■□□□□ 0.93
CIRBP-220ENST00000588917 ADCY1Q08828 1119 aa20.84■□□□□ 0.93
CIRBP-220ENST00000588917 LLGL2Q6P1M3 1020 aa20.84■□□□□ 0.93
CIRBP-220ENST00000588917 LRRTM3Q86VH5 581 aa20.84■□□□□ 0.93
CIRBP-220ENST00000588917 SPATA2LQ8IUW3 424 aaPredicted RBP20.84■□□□□ 0.93
CIRBP-220ENST00000588917 TMEM209Q96SK2 561 aa20.84■□□□□ 0.93
CIRBP-220ENST00000588917 ARID3AQ99856 593 aa20.84■□□□□ 0.93
CIRBP-220ENST00000588917 RBSNQ9H1K0 784 aa20.84■□□□□ 0.93
CIRBP-220ENST00000588917 CYP4F11Q9HBI6 524 aa20.84■□□□□ 0.93
CIRBP-220ENST00000588917 ABCB6Q9NP58 842 aa20.84■□□□□ 0.93
CIRBP-220ENST00000588917 SIX2Q9NPC8 291 aa20.84■□□□□ 0.93
CIRBP-220ENST00000588917 CLDND1Q9NY35 253 aa20.84■□□□□ 0.93
CIRBP-220ENST00000588917 IFNKQ9P0W0 207 aa20.84■□□□□ 0.93
CIRBP-220ENST00000588917 RAPGEFL1Q9UHV5 662 aa20.84■□□□□ 0.93
CIRBP-220ENST00000588917 FBXW11Q9UKB1 542 aa20.84■□□□□ 0.93
CIRBP-220ENST00000588917 SIK3Q9Y2K2 1263 aa20.84■□□□□ 0.93
CIRBP-220ENST00000588917 VWA8A3KMH1 1905 aa20.84■□□□□ 0.93
CIRBP-220ENST00000588917 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.83■□□□□ 0.93
CIRBP-220ENST00000588917 MYBPHLA2RUH7 354 aa20.83■□□□□ 0.93
CIRBP-220ENST00000588917 TEX33O43247 280 aa20.83■□□□□ 0.93
CIRBP-220ENST00000588917 PAEPP09466 180 aa20.83■□□□□ 0.93
CIRBP-220ENST00000588917 UCHL3P15374 230 aa20.83■□□□□ 0.93
CIRBP-220ENST00000588917 GTF2F1P35269 517 aaKnown RBP eCLIP20.83■□□□□ 0.932e-8■□□□□ 9.4
CIRBP-220ENST00000588917 CFAP221Q4G0U5 840 aa20.83■□□□□ 0.93
CIRBP-220ENST00000588917 CYP26C1Q6V0L0 522 aa20.83■□□□□ 0.93
CIRBP-220ENST00000588917 ACOT1Q86TX2 421 aa20.83■□□□□ 0.93
CIRBP-220ENST00000588917 HEXIM2Q96MH2 286 aaKnown RBP20.83■□□□□ 0.93
CIRBP-220ENST00000588917 KREMEN1Q96MU8 473 aa20.83■□□□□ 0.93
CIRBP-220ENST00000588917 PKMYT1Q99640 499 aa20.83■□□□□ 0.93
CIRBP-220ENST00000588917 STK33Q9BYT3 514 aa20.83■□□□□ 0.93
CIRBP-220ENST00000588917 MAN1C1Q9NR34 630 aa20.83■□□□□ 0.93
CIRBP-220ENST00000588917 CNTN6Q9UQ52 1028 aa20.83■□□□□ 0.93
CIRBP-220ENST00000588917 ATP8B3O60423 1300 aa20.82■□□□□ 0.92
CIRBP-220ENST00000588917 MTMR11A4FU01 709 aa20.82■□□□□ 0.92
CIRBP-220ENST00000588917 ATP2C2O75185 946 aa20.82■□□□□ 0.92
CIRBP-220ENST00000588917 SPATA31D3P0C874 917 aa20.82■□□□□ 0.92
CIRBP-220ENST00000588917 ACO1P21399 889 aaKnown RBP20.82■□□□□ 0.92
CIRBP-220ENST00000588917 HOXA9P31269 272 aa20.82■□□□□ 0.92
CIRBP-220ENST00000588917 PLD1Q13393 1074 aa20.82■□□□□ 0.92
CIRBP-220ENST00000588917 ARHGAP44Q17R89 818 aa20.82■□□□□ 0.92
CIRBP-220ENST00000588917 ZNF394Q53GI3 561 aa20.82■□□□□ 0.92
CIRBP-220ENST00000588917 TMEM270Q6UE05 265 aa20.82■□□□□ 0.92
CIRBP-220ENST00000588917 EP400NLQ6ZTU2 488 aa20.82■□□□□ 0.92
CIRBP-220ENST00000588917 SPATA31D4Q6ZUB0 917 aa20.82■□□□□ 0.92
CIRBP-220ENST00000588917 GAS2L3Q86XJ1 694 aa20.82■□□□□ 0.92
CIRBP-220ENST00000588917 UBR7Q8N806 425 aa20.82■□□□□ 0.92
CIRBP-220ENST00000588917 WHAMMQ8TF30 809 aa20.82■□□□□ 0.92
CIRBP-220ENST00000588917 IQCDQ96DY2 449 aa20.82■□□□□ 0.92
CIRBP-220ENST00000588917 PGLYRP2Q96PD5 576 aa20.82■□□□□ 0.92
CIRBP-220ENST00000588917 NUP58Q9BVL2 599 aa20.82■□□□□ 0.92
CIRBP-220ENST00000588917 UBE2ZQ9H832 354 aaPredicted RBP20.82■□□□□ 0.92
CIRBP-220ENST00000588917 CRTAC1Q9NQ79 661 aa20.82■□□□□ 0.92
CIRBP-220ENST00000588917 FAM207AQ9NSI2 230 aaPredicted RBP20.82■□□□□ 0.92
CIRBP-220ENST00000588917 ZDHHC7Q9NXF8 308 aa20.82■□□□□ 0.92
CIRBP-220ENST00000588917 HCRTO43612 131 aa20.81■□□□□ 0.92
CIRBP-220ENST00000588917 ZMYND10O75800 440 aa20.81■□□□□ 0.92
CIRBP-220ENST00000588917 HNRNPA1P09651 372 aaKnown RBP eCLIP20.81■□□□□ 0.92
CIRBP-220ENST00000588917 ALDH1A3P47895 512 aa20.81■□□□□ 0.92
CIRBP-220ENST00000588917 RAD23BP54727 409 aa20.81■□□□□ 0.92
CIRBP-220ENST00000588917 PSMC1P62191 440 aaKnown RBP20.81■□□□□ 0.92
CIRBP-220ENST00000588917 PLCB2Q00722 1185 aa20.81■□□□□ 0.92
CIRBP-220ENST00000588917 CYP27A1Q02318 531 aa20.81■□□□□ 0.92
CIRBP-220ENST00000588917 DUSP4Q13115 394 aa20.81■□□□□ 0.92
CIRBP-220ENST00000588917 MDH1BQ5I0G3 518 aa20.81■□□□□ 0.92
CIRBP-220ENST00000588917 PPM1LQ5SGD2 360 aa20.81■□□□□ 0.92
CIRBP-220ENST00000588917 IQCEQ6IPM2 695 aa20.81■□□□□ 0.92
CIRBP-220ENST00000588917 DPY19L2P1Q6NXN4 242 aa20.81■□□□□ 0.92
CIRBP-220ENST00000588917 ANKRD54Q6NXT1 300 aa20.81■□□□□ 0.92
CIRBP-220ENST00000588917 VSTM1Q6UX27 236 aa20.81■□□□□ 0.92
CIRBP-220ENST00000588917 FMNL3Q8IVF7 1028 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms