RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 PARNO95453 639 aaKnown RBP14.59□□□□□ -0.07
TPM1-215ENST00000558868 TFRCP02786 760 aaKnown RBP14.59□□□□□ -0.07
TPM1-215ENST00000558868 COL6A1P12109 1028 aa14.59□□□□□ -0.07
TPM1-215ENST00000558868 CTNNA1P35221 906 aaKnown RBP14.59□□□□□ -0.07
TPM1-215ENST00000558868 PPP2R5EQ16537 467 aa14.59□□□□□ -0.07
TPM1-215ENST00000558868 GLE1Q53GS7 698 aaKnown RBP14.59□□□□□ -0.07
TPM1-215ENST00000558868 DCUN1D2Q6PH85 259 aa14.59□□□□□ -0.07
TPM1-215ENST00000558868 TRAF7Q6Q0C0 670 aa14.59□□□□□ -0.07
TPM1-215ENST00000558868 SLC24A5Q71RS6 500 aa14.59□□□□□ -0.07
TPM1-215ENST00000558868 FAM126BQ8IXS8 530 aa14.59□□□□□ -0.07
TPM1-215ENST00000558868 ADGRF2Q8IZF7 708 aa14.59□□□□□ -0.07
TPM1-215ENST00000558868 TMEM86AQ8N2M4 240 aa14.59□□□□□ -0.07
TPM1-215ENST00000558868 RNF169Q8NCN4 708 aa14.59□□□□□ -0.07
TPM1-215ENST00000558868 SPATA18Q8TC71 538 aa14.59□□□□□ -0.07
TPM1-215ENST00000558868 LPPQ93052 612 aa14.59□□□□□ -0.07
TPM1-215ENST00000558868 C18orf8Q96DM3 657 aa14.59□□□□□ -0.07
TPM1-215ENST00000558868 PCDHA3Q9Y5H8 950 aa14.59□□□□□ -0.07
TPM1-215ENST00000558868 SCN1AP35498 2009 aa14.58□□□□□ -0.08
TPM1-215ENST00000558868 CCDC188H7C350 402 aa14.58□□□□□ -0.08
TPM1-215ENST00000558868 CYB561D2O14569 222 aa14.58□□□□□ -0.08
TPM1-215ENST00000558868 SPTLC1O15269 473 aa14.58□□□□□ -0.08
TPM1-215ENST00000558868 GPD2P43304 727 aa14.58□□□□□ -0.08
TPM1-215ENST00000558868 GABRB2P47870 512 aa14.58□□□□□ -0.08
TPM1-215ENST00000558868 SCNN1GP51170 649 aa14.58□□□□□ -0.08
TPM1-215ENST00000558868 RWDD2BP57060 319 aa14.58□□□□□ -0.08
TPM1-215ENST00000558868 FAM189BP81408 668 aa14.58□□□□□ -0.08
TPM1-215ENST00000558868 ORC1Q13415 861 aa14.58□□□□□ -0.08
TPM1-215ENST00000558868 GOLGA7BQ2TAP0 167 aa14.58□□□□□ -0.08
TPM1-215ENST00000558868 SEL1L2Q5TEA6 688 aa14.58□□□□□ -0.08
TPM1-215ENST00000558868 GLB1LQ6UWU2 654 aa14.58□□□□□ -0.08
TPM1-215ENST00000558868 ACOT1Q86TX2 421 aa14.58□□□□□ -0.08
TPM1-215ENST00000558868 GSTCDQ8NEC7 633 aa14.58□□□□□ -0.08
TPM1-215ENST00000558868 URGCPQ8TCY9 931 aa14.58□□□□□ -0.08
TPM1-215ENST00000558868 APBB2Q92870 758 aa14.58□□□□□ -0.08
TPM1-215ENST00000558868 CD101Q93033 1021 aa14.58□□□□□ -0.08
TPM1-215ENST00000558868 MS4A14Q96JA4 679 aa14.58□□□□□ -0.08
TPM1-215ENST00000558868 GOLGA2P5Q9HBQ8 144 aa14.58□□□□□ -0.08
TPM1-215ENST00000558868 RNF19AQ9NV58 838 aa14.58□□□□□ -0.08
TPM1-215ENST00000558868 RNF216Q9NWF9 866 aaPredicted RBP14.58□□□□□ -0.08
TPM1-215ENST00000558868 CHORDC1Q9UHD1 332 aaPredicted RBP14.58□□□□□ -0.08
TPM1-215ENST00000558868 TSPAN16Q9UKR8 245 aa14.58□□□□□ -0.08
TPM1-215ENST00000558868 L1RE1Q9UN81 338 aa14.58□□□□□ -0.08
TPM1-215ENST00000558868 TMEM191CA6NGB0 347 aa14.57□□□□□ -0.08
TPM1-215ENST00000558868 SIGLEC16A6NMB1 481 aa14.57□□□□□ -0.08
TPM1-215ENST00000558868 MEIS3P2A8K0S8 358 aa14.57□□□□□ -0.08
TPM1-215ENST00000558868 C9IYK1 514 aa14.57□□□□□ -0.08
TPM1-215ENST00000558868 LHX1P48742 406 aa14.57□□□□□ -0.08
TPM1-215ENST00000558868 PSMC1P62191 440 aaKnown RBP14.57□□□□□ -0.08
TPM1-215ENST00000558868 C2orf54Q08AI8 447 aa14.57□□□□□ -0.08
TPM1-215ENST00000558868 PDCLQ13371 301 aa14.57□□□□□ -0.08
TPM1-215ENST00000558868 TUSC3Q13454 348 aa14.57□□□□□ -0.08
TPM1-215ENST00000558868 PIGHQ14442 188 aaPredicted RBP14.57□□□□□ -0.08
TPM1-215ENST00000558868 BRD3Q15059 726 aa14.57□□□□□ -0.08
TPM1-215ENST00000558868 PTPROQ16827 1216 aa14.57□□□□□ -0.08
TPM1-215ENST00000558868 PTPN20Q4JDL3 420 aa14.57□□□□□ -0.08
TPM1-215ENST00000558868 DSTYKQ6XUX3 929 aa14.57□□□□□ -0.08
TPM1-215ENST00000558868 ZNF598Q86UK7 904 aaKnown RBP14.57□□□□□ -0.08
TPM1-215ENST00000558868 PDCL2Q8N4E4 241 aa14.57□□□□□ -0.08
TPM1-215ENST00000558868 NOA1Q8NC60 698 aaKnown RBP14.57□□□□□ -0.08
TPM1-215ENST00000558868 STK32AQ8WU08 396 aa14.57□□□□□ -0.08
TPM1-215ENST00000558868 KBTBD7Q8WVZ9 684 aa14.57□□□□□ -0.08
TPM1-215ENST00000558868 SEPT8Q92599 483 aa14.57□□□□□ -0.08
TPM1-215ENST00000558868 BTBD6Q96KE9 485 aa14.57□□□□□ -0.08
TPM1-215ENST00000558868 SENP8Q96LD8 212 aa14.57□□□□□ -0.08
TPM1-215ENST00000558868 PARD6BQ9BYG5 372 aa14.57□□□□□ -0.08
TPM1-215ENST00000558868 OSBPL7Q9BZF2 842 aa14.57□□□□□ -0.08
TPM1-215ENST00000558868 CYLDQ9NQC7 956 aa14.57□□□□□ -0.08
TPM1-215ENST00000558868 KANSL3Q9P2N6 904 aa14.57□□□□□ -0.08
TPM1-215ENST00000558868 COL6A3P12111 3177 aa14.57□□□□□ -0.08
TPM1-215ENST00000558868 GOLGA6L10A0A0M3HER8 536 aa14.56□□□□□ -0.08
TPM1-215ENST00000558868 TCRBV5S1A1TA0A578 114 aa14.56□□□□□ -0.08
TPM1-215ENST00000558868 PSTPIP1O43586 416 aa14.56□□□□□ -0.08
TPM1-215ENST00000558868 ERLIN1O75477 346 aa14.56□□□□□ -0.08
TPM1-215ENST00000558868 RHOXF2BP0C7M4 288 aa14.56□□□□□ -0.08
TPM1-215ENST00000558868 KRT3P12035 628 aa14.56□□□□□ -0.08
TPM1-215ENST00000558868 H2AFXP16104 143 aaPredicted RBP14.56□□□□□ -0.08
TPM1-215ENST00000558868 CETN2P41208 172 aa14.56□□□□□ -0.08
TPM1-215ENST00000558868 PEX5P50542 639 aa14.56□□□□□ -0.08
TPM1-215ENST00000558868 BCAT1P54687 386 aa14.56□□□□□ -0.08
TPM1-215ENST00000558868 SLC8A3P57103 927 aa14.56□□□□□ -0.08
TPM1-215ENST00000558868 MBTPS1Q14703 1052 aa14.56□□□□□ -0.08
TPM1-215ENST00000558868 MTFR1Q15390 333 aa14.56□□□□□ -0.08
TPM1-215ENST00000558868 UPP1Q16831 310 aa14.56□□□□□ -0.08
TPM1-215ENST00000558868 LONRF2Q1L5Z9 754 aa14.56□□□□□ -0.08
TPM1-215ENST00000558868 C2CD6Q53TS8 623 aa14.56□□□□□ -0.08
TPM1-215ENST00000558868 PPP1R15BQ5SWA1 713 aa14.56□□□□□ -0.08
TPM1-215ENST00000558868 PPP1R26Q5T8A7 1209 aaPredicted RBP14.56□□□□□ -0.08
TPM1-215ENST00000558868 PHLDB2Q86SQ0 1253 aa14.56□□□□□ -0.08
TPM1-215ENST00000558868 METTL23Q86XA0 190 aa14.56□□□□□ -0.08
TPM1-215ENST00000558868 RHOT1Q8IXI2 618 aa14.56□□□□□ -0.08
TPM1-215ENST00000558868 FNIP1Q8TF40 1166 aa14.56□□□□□ -0.08
TPM1-215ENST00000558868 RNPC3Q96LT9 517 aaKnown RBP14.56□□□□□ -0.08
TPM1-215ENST00000558868 RHOXF2Q9BQY4 288 aa14.56□□□□□ -0.08
TPM1-215ENST00000558868 ELAC1Q9H777 363 aaKnown RBP14.56□□□□□ -0.08
TPM1-215ENST00000558868 ANKZF1Q9H8Y5 726 aa14.56□□□□□ -0.08
TPM1-215ENST00000558868 MIOSQ9NXC5 875 aa14.56□□□□□ -0.08
TPM1-215ENST00000558868 DSEQ9UL01 958 aa14.56□□□□□ -0.08
TPM1-215ENST00000558868 RAB21Q9UL25 225 aa14.56□□□□□ -0.08
TPM1-215ENST00000558868 DCDC2CA8MYV0 355 aa14.55□□□□□ -0.08
TPM1-215ENST00000558868 KRIT1O00522 736 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms