RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 GEMIN8Q9NWZ8 242 aaKnown RBP10.74□□□□□ -0.69
HNRNPC-228ENST00000557033 FNIP2Q9P278 1114 aa10.74□□□□□ -0.69
HNRNPC-228ENST00000557033 ARHGAP28Q9P2N2 729 aa10.74□□□□□ -0.69
HNRNPC-228ENST00000557033 HCN2Q9UL51 889 aa10.74□□□□□ -0.69
HNRNPC-228ENST00000557033 DCDC2BA2VCK2 349 aa10.73□□□□□ -0.69
HNRNPC-228ENST00000557033 H0YCG3 227 aa10.73□□□□□ -0.69
HNRNPC-228ENST00000557033 C2CD2LO14523 706 aa10.73□□□□□ -0.69
HNRNPC-228ENST00000557033 PTGESO14684 152 aa10.73□□□□□ -0.69
HNRNPC-228ENST00000557033 TEX28O15482 410 aa10.73□□□□□ -0.69
HNRNPC-228ENST00000557033 RECQL4O94761 1208 aa10.73□□□□□ -0.69
HNRNPC-228ENST00000557033 EDN1P05305 212 aa10.73□□□□□ -0.69
HNRNPC-228ENST00000557033 PLA2G4BP0C869 781 aa10.73□□□□□ -0.69
HNRNPC-228ENST00000557033 MAPTP10636 758 aaKnown RBP10.73□□□□□ -0.69
HNRNPC-228ENST00000557033 PLS3P13797 630 aa10.73□□□□□ -0.69
HNRNPC-228ENST00000557033 SCP2P22307 547 aa10.73□□□□□ -0.69
HNRNPC-228ENST00000557033 LONP1P36776 959 aaKnown RBP10.73□□□□□ -0.69
HNRNPC-228ENST00000557033 SLC12A3P55017 1021 aa10.73□□□□□ -0.69
HNRNPC-228ENST00000557033 ZXDAP98168 799 aa10.73□□□□□ -0.69
HNRNPC-228ENST00000557033 ELAVL2Q12926 359 aaKnown RBP10.73□□□□□ -0.69
HNRNPC-228ENST00000557033 MAPK7Q13164 816 aa10.73□□□□□ -0.69
HNRNPC-228ENST00000557033 UBAP2LQ14157 1087 aaKnown RBP10.73□□□□□ -0.69
HNRNPC-228ENST00000557033 NAB2Q15742 525 aa10.73□□□□□ -0.69
HNRNPC-228ENST00000557033 ZNF423Q2M1K9 1284 aa10.73□□□□□ -0.69
HNRNPC-228ENST00000557033 TMEM119Q4V9L6 283 aa10.73□□□□□ -0.69
HNRNPC-228ENST00000557033 RARS2Q5T160 578 aaKnown RBP10.73□□□□□ -0.69
HNRNPC-228ENST00000557033 SULF2Q8IWU5 870 aa10.73□□□□□ -0.69
HNRNPC-228ENST00000557033 C12orf76Q8N812 135 aaPredicted RBP10.73□□□□□ -0.69
HNRNPC-228ENST00000557033 CMASQ8NFW8 434 aaPredicted RBP10.73□□□□□ -0.69
HNRNPC-228ENST00000557033 KCNN1Q92952 543 aa10.73□□□□□ -0.69
HNRNPC-228ENST00000557033 NINJ1Q92982 152 aa10.73□□□□□ -0.69
HNRNPC-228ENST00000557033 BHMTQ93088 406 aa10.73□□□□□ -0.69
HNRNPC-228ENST00000557033 CALML4Q96GE6 196 aa10.73□□□□□ -0.69
HNRNPC-228ENST00000557033 INTS4Q96HW7 963 aaKnown RBP10.73□□□□□ -0.69
HNRNPC-228ENST00000557033 MFSD14AQ96MC6 490 aa10.73□□□□□ -0.69
HNRNPC-228ENST00000557033 SLC30A3Q99726 388 aa10.73□□□□□ -0.69
HNRNPC-228ENST00000557033 TM9SF2Q99805 663 aa10.73□□□□□ -0.69
HNRNPC-228ENST00000557033 RHOBTB2Q9BYZ6 727 aa10.73□□□□□ -0.69
HNRNPC-228ENST00000557033 POMKQ9H5K3 350 aa10.73□□□□□ -0.69
HNRNPC-228ENST00000557033 PTPRHQ9HD43 1115 aa10.73□□□□□ -0.69
HNRNPC-228ENST00000557033 TOPORSQ9NS56 1045 aaPredicted RBP10.73□□□□□ -0.69
HNRNPC-228ENST00000557033 MARK1Q9P0L2 795 aa10.73□□□□□ -0.69
HNRNPC-228ENST00000557033 LARSQ9P2J5 1176 aaKnown RBP10.73□□□□□ -0.69
HNRNPC-228ENST00000557033 SF3B1O75533 1304 aaKnown RBP eCLIP10.73□□□□□ -0.696e-9■■■■□ 22.2
HNRNPC-228ENST00000557033 J3QW42 95 aa10.72□□□□□ -0.69
HNRNPC-228ENST00000557033 PAPLNO95428 1278 aa10.72□□□□□ -0.69
HNRNPC-228ENST00000557033 B3GALT4O96024 378 aa10.72□□□□□ -0.69
HNRNPC-228ENST00000557033 GLUD1P00367 558 aa10.72□□□□□ -0.69
HNRNPC-228ENST00000557033 MCF2P10911 925 aa10.72□□□□□ -0.69
HNRNPC-228ENST00000557033 PROZP22891 400 aa10.72□□□□□ -0.69
HNRNPC-228ENST00000557033 YARSP54577 528 aaKnown RBP10.72□□□□□ -0.69
HNRNPC-228ENST00000557033 STRN3Q13033 797 aa10.72□□□□□ -0.69
HNRNPC-228ENST00000557033 PTPN21Q16825 1174 aa10.72□□□□□ -0.69
HNRNPC-228ENST00000557033 LONRF2Q1L5Z9 754 aa10.72□□□□□ -0.69
HNRNPC-228ENST00000557033 XKR4Q5GH76 650 aa10.72□□□□□ -0.69
HNRNPC-228ENST00000557033 SCARA3Q6AZY7 606 aa10.72□□□□□ -0.69
HNRNPC-228ENST00000557033 PDXDC1Q6P996 788 aa10.72□□□□□ -0.69
HNRNPC-228ENST00000557033 DCLRE1AQ6PJP8 1040 aa10.72□□□□□ -0.69
HNRNPC-228ENST00000557033 ALKAL1Q6UXT8 129 aa10.72□□□□□ -0.69
HNRNPC-228ENST00000557033 TMC5Q6UXY8 1006 aa10.72□□□□□ -0.69
HNRNPC-228ENST00000557033 ZPBP2Q6X784 338 aa10.72□□□□□ -0.69
HNRNPC-228ENST00000557033 TRIM67Q6ZTA4 783 aa10.72□□□□□ -0.69
HNRNPC-228ENST00000557033 THNSL2Q86YJ6 484 aa10.72□□□□□ -0.69
HNRNPC-228ENST00000557033 ZDHHC14Q8IZN3 488 aa10.72□□□□□ -0.69
HNRNPC-228ENST00000557033 SGSM3Q96HU1 749 aa10.72□□□□□ -0.69
HNRNPC-228ENST00000557033 UROC1Q96N76 676 aa10.72□□□□□ -0.69
HNRNPC-228ENST00000557033 PAAF1Q9BRP4 392 aa10.72□□□□□ -0.69
HNRNPC-228ENST00000557033 TCHPQ9BT92 498 aa10.72□□□□□ -0.69
HNRNPC-228ENST00000557033 CCDC94Q9BW85 323 aaPredicted RBP10.72□□□□□ -0.69
HNRNPC-228ENST00000557033 KCNH6Q9H252 994 aa10.72□□□□□ -0.69
HNRNPC-228ENST00000557033 PLEKHA4Q9H4M7 779 aa10.72□□□□□ -0.69
HNRNPC-228ENST00000557033 RAPGEFL1Q9UHV5 662 aa10.72□□□□□ -0.69
HNRNPC-228ENST00000557033 ODF2LQ9ULJ1 636 aa10.72□□□□□ -0.69
HNRNPC-228ENST00000557033 GDAQ9Y2T3 454 aa10.72□□□□□ -0.69
HNRNPC-228ENST00000557033 SMIM28A0A1B0GU29 152 aa10.71□□□□□ -0.69
HNRNPC-228ENST00000557033 CCDC195A0A1B0GUA6 201 aa10.71□□□□□ -0.69
HNRNPC-228ENST00000557033 VPS37CA5D8V6 355 aaPredicted RBP10.71□□□□□ -0.69
HNRNPC-228ENST00000557033 CASTOR2A6NHX0 329 aa10.71□□□□□ -0.69
HNRNPC-228ENST00000557033 UPK3BL1B0FP48 263 aa10.71□□□□□ -0.69
HNRNPC-228ENST00000557033 UPK3BL2E5RIL1 263 aa10.71□□□□□ -0.69
HNRNPC-228ENST00000557033 F8W810 466 aa10.71□□□□□ -0.69
HNRNPC-228ENST00000557033 TMEM189-UBE2V1I3L0A0 370 aa10.71□□□□□ -0.69
HNRNPC-228ENST00000557033 SLC16A4O15374 487 aa10.71□□□□□ -0.69
HNRNPC-228ENST00000557033 TRAPPC3O43617 180 aa10.71□□□□□ -0.69
HNRNPC-228ENST00000557033 TOM1L1O75674 476 aa10.71□□□□□ -0.69
HNRNPC-228ENST00000557033 ATP11AP98196 1134 aa10.71□□□□□ -0.69
HNRNPC-228ENST00000557033 PCDH1Q08174 1060 aa10.71□□□□□ -0.69
HNRNPC-228ENST00000557033 SIGLEC14Q08ET2 396 aa10.71□□□□□ -0.69
HNRNPC-228ENST00000557033 ZNF252P-AS1Q0IIN9 211 aa10.71□□□□□ -0.69
HNRNPC-228ENST00000557033 ZNF568Q3ZCX4 644 aa10.71□□□□□ -0.69
HNRNPC-228ENST00000557033 FAM171A1Q5VUB5 890 aa10.71□□□□□ -0.69
HNRNPC-228ENST00000557033 LILRA6Q6PI73 481 aa10.71□□□□□ -0.69
HNRNPC-228ENST00000557033 MPZL3Q6UWV2 235 aa10.71□□□□□ -0.69
HNRNPC-228ENST00000557033 ZSCAN1Q8NBB4 408 aa10.71□□□□□ -0.69
HNRNPC-228ENST00000557033 TMEM161BQ8NDZ6 487 aa10.71□□□□□ -0.69
HNRNPC-228ENST00000557033 CHAC2Q8WUX2 184 aa10.71□□□□□ -0.69
HNRNPC-228ENST00000557033 RIN2Q8WYP3 895 aaPredicted RBP10.71□□□□□ -0.69
HNRNPC-228ENST00000557033 RABGGTAQ92696 567 aa10.71□□□□□ -0.69
HNRNPC-228ENST00000557033 ACSF2Q96CM8 615 aaPredicted RBP10.71□□□□□ -0.69
HNRNPC-228ENST00000557033 MFSD3Q96ES6 412 aa10.71□□□□□ -0.69
HNRNPC-228ENST00000557033 ACAP3Q96P50 834 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 127.2 ms